RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 NEK9Q8TD19 979 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 NKD2Q969F2 451 aaPredicted RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 PPP2R3CQ969Q6 453 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 UTP4Q969X6 686 aaKnown RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 PTERQ96BW5 349 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 TUBGCP3Q96CW5 907 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 HDAC11Q96DB2 347 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 ZDHHC12Q96GR4 267 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 ERO1AQ96HE7 468 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 INTS4Q96HW7 963 aaKnown RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 PHACTR3Q96KR7 559 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 TBC1D32Q96NH3 1257 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 SLC46A1Q96NT5 459 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 GAL3ST4Q96RP7 486 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 UBL7Q96S82 380 aaPredicted RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 SRSF8Q9BRL6 282 aaKnown RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 NDC1Q9BTX1 674 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 KIFC3Q9BVG8 833 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 NUP85Q9BW27 656 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 TRIM7Q9C029 511 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 CTDSP1Q9GZU7 261 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 CLPBQ9H078 707 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 ZNF552Q9H707 407 aaPredicted RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 CARS2Q9HA77 564 aaKnown RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 SEMA3GQ9NS98 782 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 COX16Q9P0S2 106 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 RBPJLQ9UBG7 517 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 SLC23A1Q9UHI7 598 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 PTBP2Q9UKA9 531 aaKnown RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 CAB39Q9Y376 341 aaPredicted RBP4.75□□□□□ -1.65
C11orf54-213ENST00000533585 CAPN7Q9Y6W3 813 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 ATRNL1Q5VV63 1379 aa4.75□□□□□ -1.65
C11orf54-213ENST00000533585 AOX1Q06278 1338 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MBD3L5A6NJ08 208 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 C1QTNF9BB2RNN3 333 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 H0YCG3 227 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 M0QYT0 321 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SLC33A1O00400 549 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PER2O15055 1255 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 VPS4BO75351 444 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ZBTB7AO95365 584 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PRG2P13727 222 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 HGFP14210 728 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ARF4P18085 180 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TNFRSF8P28908 595 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MAGEA4P43358 317 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ASMTP46597 345 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 GLRBP48167 497 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PTTG1IPP53801 180 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PRKAG1P54619 331 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 NME5P56597 212 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 FAM3BP58499 235 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ACTR1AP61163 376 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PTH1RQ03431 593 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ABHD18Q0P651 414 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 CSTF3Q12996 717 aaKnown RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TRIM28Q13263 835 aaKnown RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TRA2AQ13595 282 aaKnown RBP eCLIP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ZKSCAN8Q15776 578 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 USP39Q53GS9 565 aaKnown RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TEX35Q5T0J7 233 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 C10orf76Q5T2E6 689 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 HEPHL1Q6MZM0 1159 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SLC25A24Q6NUK1 477 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ZNF529Q6P280 563 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TMEM81Q6P7N7 255 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ZCCHC12Q6PEW1 402 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SERPINA13PQ6UXR4 307 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 LIPIQ6XZB0 460 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 CXXC5Q7LFL8 322 aaKnown RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SLC46A3Q7Z3Q1 461 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 CACNA2D4Q7Z3S7 1137 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 FAM160B2Q86V87 743 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PROSER1Q86XN7 944 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 WFDC3Q8IUB2 231 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MAML2Q8IZL2 1156 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SFRP1Q8N474 314 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 FSTL5Q8N475 847 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MB21D1Q8N884 522 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TC2NQ8N9U0 490 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 FBXO15Q8NCQ5 510 aaPredicted RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 NEDD1Q8NHV4 660 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 DNAJB14Q8TBM8 379 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ST7LQ8TDW4 575 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SLC13A3Q8WWT9 602 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 LINC01599Q8WXQ3 324 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ACDQ96AP0 544 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MYRFLQ96LU7 910 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PAAF1Q9BRP4 392 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TACO1Q9BSH4 297 aaKnown RBP4.74□□□□□ -1.65
C11orf54-213ENST00000533585 SYT17Q9BSW7 474 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MRI1Q9BV20 369 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 HEMGNQ9BXL5 484 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 IMPG2Q9BZV3 1241 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 TRIM31Q9BZY9 425 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 MMRN2Q9H8L6 949 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 PDE11AQ9HCR9 933 aa4.74□□□□□ -1.65
C11orf54-213ENST00000533585 ATP13A1Q9HD20 1204 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms