RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 WDR59Q6PJI9 974 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 LRRC31Q6UY01 552 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 MON1BQ7L1V2 547 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 ARCQ7LC44 396 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 BNIPLQ7Z465 357 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 PHF13Q86YI8 300 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SYT12Q8IV01 421 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF683Q8IZ20 524 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 KIAA1524Q8TCG1 905 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 GANCQ8TET4 914 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 ALG14Q96F25 216 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 FEM1AQ9BSK4 669 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 RTKNQ9BST9 563 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 EDEM2Q9BV94 578 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 MUC3BQ9H195 1237 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 HAUS4Q9H6D7 363 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 WSB2Q9NYS7 404 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 USP36Q9P275 1121 aaKnown RBP8.51□□□□□ -1.05
HDAC6-221ENST00000477561 VPS28Q9UK41 221 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 PILRBQ9UKJ0 227 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 PAXBP1Q9Y5B6 917 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 SPAG17Q6Q759 2223 aa8.51□□□□□ -1.05
HDAC6-221ENST00000477561 MUC22E2RYF6 1773 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 LAMA1P25391 3075 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 LNP1A1A4G5 178 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 SIGLEC16A6NMB1 481 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 DRGXA6NNA5 263 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 MEI4A8MW99 385 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FAM72CH0Y354 149 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 BNIP3LO60238 219 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FOXD2O60548 495 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 SNAP91O60641 907 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 RHOCP08134 193 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 GPD1P21695 349 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 SDHBP21912 280 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FECHP22830 423 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 RRM1P23921 792 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 OXTRP30559 389 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 HNRNPH3P31942 346 aaKnown RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ACSL1P33121 698 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ADRA1BP35368 520 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 NNMTP40261 264 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 MAPK8P45983 427 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 PLK1P53350 603 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 HDAC4P56524 1084 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 RPL7AP62424 266 aaKnown RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 SLC12A1Q13621 1099 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 UAP1L1Q3KQV9 507 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 C5orf22Q49AR2 442 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ACCSLQ4AC99 568 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ARTNQ5T4W7 220 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FAM72AQ5TYM5 149 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 DCAF12L1Q5VU92 463 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF776Q68DI1 518 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 IL31Q6EBC2 164 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FAM72DQ6L9T8 149 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 DNAJC24Q6P3W2 148 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 SCYL2Q6P3W7 929 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF571Q7Z3V5 609 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FAM72BQ86X60 149 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 MMAAQ8IVH4 418 aaKnown RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 MCOLN2Q8IZK6 566 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 STK40Q8N2I9 435 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 CCDC185Q8N715 623 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 C3orf20Q8ND61 904 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 OR7D4Q8NG98 312 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FAM172AQ8WUF8 416 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 PTPRN2Q92932 1015 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF419Q96HQ0 510 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 C1orf74Q96LT6 269 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 MCEEQ96PE7 176 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 HAPLN3Q96S86 360 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 FAM129BQ96TA1 746 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 SYT11Q9BT88 431 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 NUSAP1Q9BXS6 441 aaKnown RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 MIR1-1HGQ9H1L0 117 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 RSPH9Q9H1X1 276 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 C6orf106Q9H6K1 298 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.5□□□□□ -1.05
HDAC6-221ENST00000477561 PYCARDQ9ULZ3 195 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 TBC1D30Q9Y2I9 924 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 OR51B4Q9Y5P0 310 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 CEP250Q9BV73 2442 aa8.5□□□□□ -1.05
HDAC6-221ENST00000477561 A0A0D9SEW6 157 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 EDDM13A0A1B0GTR0 161 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 TCRBV5S1A1TA0A578 114 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 MED19A0JLT2 244 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 TARSL2A2RTX5 802 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 K7ERQ8 282 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 MID1O15344 667 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 ZSCAN12O43309 604 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF500O60304 480 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 RNASEH1O60930 286 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 IPO7O95373 1038 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 MT-CO1P00395 513 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 IL1BP01584 269 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms