RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	VANGL2	Q9ULK5	521 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	SNX10	Q9Y5X0	201 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	TP53BP1	Q12888	1972 aa	Predicted RBP	13.09	□□□□□ -0.31
FDPS-204	ENST00000461507		A0A1B0GTW7	788 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	METTL12	A8MUP2	240 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	RTN2	O75298	545 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ADCY5	O95622	1261 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	CD59	P13987	128 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	GNS	P15586	552 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	RFC1	P35251	1148 aa	Predicted RBP	13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ATXN3	P54252	364 aa	Predicted RBP	13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ADK	P55263	362 aa	Known RBP	13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ARID5B	Q14865	1188 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ARL13B	Q3SXY8	428 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	FNDC3B	Q53EP0	1204 aa	Known RBP	13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	BRMS1L	Q5PSV4	323 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	TRNP1	Q6NT89	227 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	LRRC31	Q6UY01	552 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	DRC7	Q8IY82	874 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	HDDC3	Q8N4P3	179 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	KDM1B	Q8NB78	822 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	CYB5D2	Q8WUJ1	264 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	SYN2	Q92777	582 aa	Predicted RBP	13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	MYEOV	Q96EZ4	313 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	TRIM11	Q96F44	468 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ANP32E	Q9BTT0	268 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	GPR174	Q9BXC1	333 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	ADAM33	Q9BZ11	813 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	PRSS16	Q9NQE7	514 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	TMPRSS4	Q9NRS4	437 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	PLA2G4C	Q9UP65	541 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	HS3ST4	Q9Y661	456 aa		13.09	□□□□□ -0.31
FDPS-204	ENST00000461507	C2CD4B	A6NLJ0	364 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	SIGLEC16	A6NMB1	481 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	MEI4	A8MW99	385 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	C10orf142	B7Z368	130 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	CCP110	O43303	1012 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	SRGAP2	O75044	1071 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	LUC7L3	O95232	432 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	MOCS3	O95396	460 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	ASL	P04424	464 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	ATP5B	P06576	529 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	PSMA2	P25787	234 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	CXCR3	P49682	368 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	RPS14	P62263	151 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	GRIK2	Q13002	908 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	MTA1	Q13330	715 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	AUH	Q13825	339 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	HNRNPD	Q14103	355 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	PLEKHG6	Q3KR16	790 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	CCDC14	Q49A88	953 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	CCDC122	Q5T0U0	273 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	DCAF12L1	Q5VU92	463 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	HGSNAT	Q68CP4	663 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	FBXL22	Q6P050	247 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	WDR59	Q6PJI9	974 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	RGL4	Q8IZJ4	473 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	OR8K1	Q8NGG5	319 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	MRGPRX3	Q96LB0	322 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	SYT11	Q9BT88	431 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	GTPBP2	Q9BX10	602 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	OSGEP	Q9NPF4	335 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	ABHD10	Q9NUJ1	306 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	PARVA	Q9NVD7	372 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	INTS6	Q9UL03	887 aa	Known RBP	13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	SCIN	Q9Y6U3	715 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	KNL1	Q8NG31	2342 aa		13.08	□□□□□ -0.32
FDPS-204	ENST00000461507	CABIN1	Q9Y6J0	2220 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	AKR1B10	O60218	316 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	MFAP3L	O75121	409 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	PROS1	P07225	676 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	ZNF883	P0CG24	379 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	ACADM	P11310	421 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	GZMA	P12544	262 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	POLR2E	P19388	210 aa	Known RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	MAOB	P27338	520 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	EIF4A3	P38919	411 aa	Known RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	PTPN9	P43378	593 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	GSC	P56915	257 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	RPL7A	P62424	266 aa	Known RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	FOXC1	Q12948	553 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	RAB6C	Q53S08	254 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	RNF219	Q5W0B1	726 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	RWDD4	Q6NW29	188 aa	Known RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	SARM1	Q6SZW1	724 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	GAS2L3	Q86XJ1	694 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	CACUL1	Q86Y37	369 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	CNGA4	Q8IV77	575 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	ZCCHC9	Q8N567	271 aa	Known RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	ZNF366	Q8N895	744 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	OR2I1P	Q8NGU4	316 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	PGAP3	Q96FM1	320 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	RAB6C	Q9H0N0	254 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	ARHGEF38	Q9NXL2	777 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.07	□□□□□ -0.32
FDPS-204	ENST00000461507	TMEM131	Q92545	1883 aa		13.07	□□□□□ -0.32
FDPS-204	ENST00000461507		A0A087X0T9	212 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms