RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TESK1Q15569 626 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MUM1Q2TAK8 710 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KRTCAP3Q53RY4 240 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ODF2Q5BJF6 829 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF362Q5T0B9 420 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PRAMEF13Q5VWM6 474 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 GPR139Q6DWJ6 353 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 RINT1Q6NUQ1 792 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SHC4Q6S5L8 630 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 IL27RAQ6UWB1 636 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CRELD2Q6UXH1 353 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 RBM43Q6ZSC3 357 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF410Q86VK4 478 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 LRRC49Q8IUZ0 686 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 LRRC8AQ8IWT6 810 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZZZ3Q8IYH5 903 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 DEFB123Q8N688 67 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CCDC150Q8NCX0 1101 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MCPH1Q8NEM0 835 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 TRIM58Q8NG06 486 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PPP1R14CQ8TAE6 165 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF507Q8TCN5 953 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CACTINQ8WUQ7 758 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 NRG4Q8WWG1 115 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 RSAD2Q8WXG1 361 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 RAD54LQ92698 747 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 STAMQ92783 540 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KAT5Q92993 513 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 LPPQ93052 612 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CALML4Q96GE6 196 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF845Q96IR2 970 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 CPB2Q96IY4 423 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 FAM81BQ96LP2 452 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 AK8Q96MA6 479 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 COG8Q96MW5 612 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 TSGA13Q96PP4 275 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MDFIQ99750 246 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 GORASP1Q9BQQ3 440 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PI4K2AQ9BTU6 479 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 GCOM2Q9BZD3 368 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EDEM3Q9BZQ6 932 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 NT5C3AQ9H0P0 336 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 EBF2Q9HAK2 575 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SMURF1Q9HCE7 757 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SAYSD1Q9NPB0 183 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 KLC4Q9NSK0 619 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 COMMD8Q9NX08 183 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 GFOD1Q9NXC2 390 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 TRMT1Q9NXH9 659 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 DNAJB12Q9NXW2 375 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PCDHA7Q9UN72 937 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 MAN2B2Q9Y2E5 1009 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 SRPRBQ9Y5M8 271 aaKnown RBP4.74□□□□□ -1.65
SF3B1-202ENST00000409915 GBF1Q92538 1859 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 PRUNE2Q8WUY3 3088 aa4.74□□□□□ -1.65
SF3B1-202ENST00000409915 COL6A3P12111 3177 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 FAM234BA2RU67 622 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GOLGA6L9A6NEM1 432 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CCDC169A6NNP5 214 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TBKBP1A7MCY6 615 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ISM1B1AKI9 464 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 H0Y8X5 98 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GOLGA6L19H0YKK7 550 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 MYO1FO00160 1098 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 RFXAPO00287 272 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PODXLO00592 558 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SLC16A4O15374 487 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GAS2O43903 313 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CUTAO60888 179 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PPP6R2O75170 966 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GJB3O75712 270 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SCGB1D1O95968 90 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PRKCBP05771 671 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CCDC175P0C221 793 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CPB1P15086 417 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CASP1P29466 404 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 HOXA11P31270 313 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 HADHAP40939 763 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 STAT6P42226 847 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 MSH2P43246 934 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PSMD7P51665 324 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PEX3P56589 373 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PTENP60484 403 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 UBE2HP62256 183 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CCZ1BP86790 482 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CCZ1P86791 482 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TAP1Q03518 808 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 MPP3Q13368 585 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 DYNC1I2Q13409 638 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ADAM15Q13444 863 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 IL10RAQ13651 578 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TFDP1Q14186 410 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 MXD4Q14582 209 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 RAB30Q15771 203 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PCSK7Q16549 785 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 IFI16Q16666 785 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 C5orf22Q49AR2 442 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CTXN3Q4LDR2 81 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms