RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 TBC1D3LB9A6J9 549 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 TBC1D3HP0C7X1 549 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 PYGMP11217 842 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 TCEA2Q15560 299 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 MPPE1Q53F39 396 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 SCARA3Q6AZY7 606 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 TBC1D3GQ6DHY5 549 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 TBC1D3CQ6IPX1 549 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 MARK2Q7KZI7 788 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 TBC1D3Q8IZP1 549 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 KRT78Q8N1N4 520 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 TRIML2Q8N7C3 387 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ZNF555Q8NEP9 628 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 CEP70Q8NHQ1 597 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 MYCBPAPQ8TBZ2 947 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 SCLYQ96I15 445 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 SPATA13Q96N96 652 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ACOX2Q99424 681 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 EPN3Q9H201 632 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 DHX33Q9H6R0 707 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 GMIPQ9P107 970 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 STOML1Q9UBI4 398 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 GNPTGQ9UJJ9 305 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ZNF214Q9UL59 606 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 A0A1W2PQH9 124 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 KPNA5O15131 536 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 GRM6O15303 877 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 DGKIO75912 1065 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 HSD17B3P37058 310 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ALDH9A1P49189 494 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 GPM6BQ13491 265 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 GRTP1Q5TC63 336 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ATAD1Q8NBU5 361 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 BTN2A3PQ96KV6 586 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 DACH2Q96NX9 599 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 KCNK16Q96T55 309 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 THUMPD3Q9BV44 507 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 H2AFY2Q9P0M6 372 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ANKRD6Q9Y2G4 727 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 SETD1AO15047 1707 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 C1orf232A0A0U1RR37 186 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 KLRG2A4D1S0 409 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 CACNB4O00305 520 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 PJA2O43164 708 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 HNRNPRO43390 633 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 CYP1A2P05177 515 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 ATP4AP20648 1035 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 PRPF39Q86UA1 669 aaKnown RBP5.07□□□□□ -1.6
HDAC9-204ENST00000406451 DBF4BQ8NFT6 615 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 IL22Q9GZX6 179 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 CREBZFQ9NS37 354 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 RPS6KB2Q9UBS0 482 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 INSL6Q9Y581 213 aa5.07□□□□□ -1.6
HDAC9-204ENST00000406451 MAP1BP46821 2468 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 COL1A1P02452 1464 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 TMEM114B3SHH9 223 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 CATP04040 527 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SYN1P17600 705 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PTPN2P17706 415 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 FMO4P31512 558 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 GUCA1AP43080 201 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PIK3CGP48736 1102 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 RRP1BQ14684 758 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 INTS6LQ5JSJ4 861 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 FBXO39Q8N4B4 442 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SHC3Q92529 594 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 HPS4Q9NQG7 708 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 Q9Y3F1 56 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 ITGB4P16144 1822 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 CFAP73A6NFT4 308 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PPP1R37O75864 691 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 ELFN1P0C7U0 828 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 RFC2P35250 354 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 ELK3P41970 407 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 NAB1Q13506 487 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 NR6A1Q15406 480 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PARP6Q2NL67 630 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SEL1L3Q68CR1 1132 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SLC44A2Q8IWA5 706 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 RSPH1Q8WYR4 309 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 BSNDQ8WZ55 320 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SEMA3CQ99985 751 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SNRNP25Q9BV90 132 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 NRDE2Q9H7Z3 1164 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 DNAJC18Q9H819 358 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PIH1D1Q9NWS0 290 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 DUS2Q9NX74 493 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 AGO1Q9UL18 857 aaKnown RBP5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PAGE1O75459 146 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 CLDN11O75508 207 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 CALCAP01258 141 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 PSMB4P28070 264 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 SOX11P35716 441 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 FLOT2Q14254 428 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 GRB14Q14449 540 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 LYPLAL1Q5VWZ2 237 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 CNKSR3Q6P9H4 555 aa5.06□□□□□ -1.6
HDAC9-204ENST00000406451 ZSWIM2Q8NEG5 633 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms