RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PHTF1Q9UMS5 762 aa13.36□□□□□ -0.27
PTPRN2-202ENST00000389416 A0A096LPK6 155 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 AIM2O14862 343 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CNTFP26441 200 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 ENPEPQ07075 957 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 BOP1Q14137 746 aaKnown RBP13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 ACOX1Q15067 660 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 MAPRE2Q15555 327 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 PDPK2PQ6A1A2 396 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 OTOAQ7RTW8 1153 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 TAC4Q86UU9 113 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CPNE8Q86YQ8 564 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 TRIM48Q8IWZ4 208 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 STK32AQ8WU08 396 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 TCF25Q9BQ70 676 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 TULP2O00295 520 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 PMM2O15305 246 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CHADO15335 359 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 MT-CO1P00395 513 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CPA2P48052 419 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 SH3PXD2AQ5TCZ1 1133 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CCDC185Q8N715 623 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 LRRC57Q8N9N7 239 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 ARNTL2Q8WYA1 636 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CDYLQ9Y232 598 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 AVILO75366 819 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 DGKIO75912 1065 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 SASH3O75995 380 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 POU5F1Q01860 360 aaKnown RBP13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 SPANXN3Q5MJ09 141 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 ARHGAP17Q68EM7 881 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 CRELD2Q6UXH1 353 aaPredicted RBP13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 TEKT4Q8WW24 435 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 IL22Q9GZX6 179 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 SNX10Q9Y5X0 201 aa13.35□□□□□ -0.27
PTPRN2-202ENST00000389416 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ARHGAP10A1A4S6 786 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 MYO1CO00159 1063 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 PHGDHO43175 533 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 E2F6O75461 281 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 DDHD2O94830 711 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 LRIG2O94898 1065 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 BGNP21810 368 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 PGM1P36871 562 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ABL2P42684 1182 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 POLR2LP62875 67 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 BTKQ06187 659 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 LPIN1Q14693 890 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 N4BP2L1Q5TBK1 243 aaPredicted RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 LAYNQ6UX15 382 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 PLD5Q8N7P1 536 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 TCP10LQ8TDR4 215 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 LRRC39Q96DD0 335 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ZCWPW1Q9H0M4 648 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■■□ 21.1
PTPRN2-202ENST00000389416 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 GON4LQ3T8J9 2241 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 SYNDIG1LA6NDD5 238 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ZNF7P17097 686 aaPredicted RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 SNRPD1P62314 119 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 SFSWAPQ12872 951 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 CST9Q5W186 159 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 TRPM8Q7Z2W7 1104 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 KIRREL3Q8IZU9 778 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 TBC1D19Q8N5T2 526 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 SLC26A7Q8TE54 656 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 TUBGCP3Q96CW5 907 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 MLPHQ9BV36 600 aaPredicted RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 FAM50BQ9Y247 325 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 RBP1P09455 135 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ARL4DP49703 201 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 SGCGQ13326 291 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ITGA9Q13797 1035 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 LRRC8EQ6NSJ5 796 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 DSG4Q86SJ6 1040 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ZNF212Q9UDV6 495 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 PCDHB9Q9Y5E1 797 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 MFSD11O43934 449 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 GUCA1CO95843 209 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 C1RP00736 705 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 C8AP07357 584 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 CDKN2BP42772 138 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 NOMO1Q15155 1222 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ING5Q8WYH8 240 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 KCTD15Q96SI1 283 aaPredicted RBP13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 CNTN3Q9P232 1028 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 ORC6Q9Y5N6 252 aa13.34□□□□□ -0.27
PTPRN2-202ENST00000389416 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.27
PTPRN2-202ENST00000389416 LUC7L3O95232 432 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms