RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RABEPKQ7Z6M1 372 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 ZNF677Q86XU0 584 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 FAM131CQ96AQ9 280 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 CAMK1GQ96NX5 476 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 BTBD1Q9H0C5 482 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 MIR1-1HGQ9H1L0 117 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 PCED1AQ9H1Q7 454 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 NEUROG2Q9H2A3 272 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 PDCL3Q9H2J4 239 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 METTL5Q9NRN9 209 aaKnown RBP17.54■□□□□ 0.4
BRCC3-202ENST00000340647 MPP6Q9NZW5 540 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 ADAMTS1Q9UHI8 967 aa17.54■□□□□ 0.4
BRCC3-202ENST00000340647 PLXNB3Q9ULL4 1909 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 A0A1W2PP55 124 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 TCRBV5S1A1TA0A578 114 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 ATP9BO43861 1147 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 DRD3P35462 400 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 GALCP54803 685 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 CDH4P55283 916 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 ST8SIA6P61647 398 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 DEUP1Q05D60 604 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 ZNF252P-AS1Q0IIN9 211 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 C15orf59Q2T9L4 293 aaPredicted RBP17.53■□□□□ 0.4
BRCC3-202ENST00000340647 CCDC14Q49A88 953 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 LAYNQ6UX15 382 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 C1orf74Q96LT6 269 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 SYT11Q9BT88 431 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 FBXL12Q9NXK8 326 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 SUSD2Q9UGT4 822 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 STAP1Q9ULZ2 295 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 PTPRBP23467 1997 aa17.53■□□□□ 0.4
BRCC3-202ENST00000340647 A0A0D9SEW6 157 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 C2CD4BA6NLJ0 364 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 PLK4O00444 970 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 WNT9AO14904 365 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 SNAP91O60641 907 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 OPHN1O60890 802 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 CLDN11O75508 207 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 MOCS3O95396 460 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 SYPP08247 313 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 GNSP15586 552 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 SLC8A1P32418 973 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 CSNK1EP49674 416 aaKnown RBP17.52■□□□□ 0.4
BRCC3-202ENST00000340647 RNF219Q5W0B1 726 aaPredicted RBP17.52■□□□□ 0.4
BRCC3-202ENST00000340647 FAM131BQ86XD5 332 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 AOPEPQ8N6M6 819 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 C11orf70Q9BRQ4 267 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 FUCA2Q9BTY2 467 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 SGK2Q9HBY8 427 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 TM9SF3Q9HD45 589 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 NEU3Q9UQ49 428 aa17.52■□□□□ 0.4
BRCC3-202ENST00000340647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SPAARA0A1B0GVQ0 90 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 A0A1B0GVT2 93 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 E9PAM4 449 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 K7ERQ8 282 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SH3BP5O60239 455 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 ZNF821O75541 412 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 MBD3O95983 291 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 F9P00740 461 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SRCP12931 536 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SPINK2P20155 84 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 GLDCP23378 1020 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 STAT1P42224 750 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 PSMD8P48556 350 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 GSCP56915 257 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 UBXN1Q04323 297 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SULT2A1Q06520 285 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 ZNF177Q13360 481 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 CLEC16AQ2KHT3 1053 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 ANO6Q4KMQ2 910 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 FKBP15Q5T1M5 1219 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 MANEALQ5VSG8 457 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 NCEH1Q6PIU2 408 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 DBX2Q6ZNG2 339 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 CCDC117Q8IWD4 279 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SH2D3CQ8N5H7 860 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 RXFP2Q8WXD0 754 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 BAP1Q92560 729 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 CENPIQ92674 756 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 VOPP1Q96AW1 172 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 HAPLN3Q96S86 360 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 TMEM121BQ9BXQ6 578 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 OSGEPQ9NPF4 335 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 SCML1Q9UN30 329 aa17.51■□□□□ 0.39
BRCC3-202ENST00000340647 FNDC3AQ9Y2H6 1198 aaKnown RBP17.51■□□□□ 0.39
BRCC3-202ENST00000340647 FAM72CH0Y354 149 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 SMAD6O43541 496 aaKnown RBP17.5■□□□□ 0.39
BRCC3-202ENST00000340647 CBFA2T3O75081 653 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 ZMPSTE24O75844 475 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 FSBPO95073 299 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 WNT1P04628 370 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 CTSLP07711 333 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 CD27P26842 260 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
BRCC3-202ENST00000340647 ATP11AP98196 1134 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 MTA1Q13330 715 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 DLG2Q15700 870 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 KIF19Q2TAC6 998 aa17.5■□□□□ 0.39
BRCC3-202ENST00000340647 HLA-BQ31612 363 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms