RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KRT83P78385 493 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 FOXK2Q01167 660 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 SFSWAPQ12872 951 aaKnown RBP28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 RAB6CQ53S08 254 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 SLC23A3Q6PIS1 610 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 TFAP2DQ7Z6R9 452 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 MCEEQ96PE7 176 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 ZYG11BQ9C0D3 744 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 RAB6CQ9H0N0 254 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 PCED1AQ9H1Q7 454 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 TAS2R14Q9NYV8 317 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 PPARGC1AQ9UBK2 798 aaKnown RBP28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 OR12D3Q9UGF7 316 aa28.37■■■□□ 2.13
ATPAF1-201ENST00000329231 MEI4A8MW99 385 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 TMCO5BA8MYB1 307 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 RRM1P23921 792 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 OR1E1P30953 314 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 PBX1P40424 430 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 ZNF143P52747 638 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 HDAC4P56524 1084 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 NRG1Q02297 640 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 E4F1Q66K89 784 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 DCUN1D2Q6PH85 259 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 ZNF571Q7Z3V5 609 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 IQCDQ96DY2 449 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 C2orf49Q9BVC5 232 aaPredicted RBP28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 OSBPL2Q9H1P3 480 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 SUSD2Q9UGT4 822 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 NCKAP1Q9Y2A7 1128 aa28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 TNRC6BQ9UPQ9 1833 aaKnown RBP28.36■■■□□ 2.13
ATPAF1-201ENST00000329231 A0A1W2PQJ5 194 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 DCDC2BA2VCK2 349 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 CFIP05156 583 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 GZMAP12544 262 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 DESP17661 470 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 PPP1R15BQ5SWA1 713 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 USP30Q70CQ3 517 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 PTPRN2Q92932 1015 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 NTAN1Q96AB6 310 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 BTBD1Q9H0C5 482 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 PABPC3Q9H361 631 aaKnown RBP28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 SLC6A14Q9UN76 642 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 CEP192Q8TEP8 1941 aa28.35■■■□□ 2.13
ATPAF1-201ENST00000329231 METTL12A8MUP2 240 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 ATP9BO43861 1147 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 SERPINF2P08697 491 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 GNSP15586 552 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 RPL7AP62424 266 aaKnown RBP28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 ELAVL3Q14576 367 aaKnown RBP28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 CST6Q15828 149 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 ACCSLQ4AC99 568 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 ARTNQ5T4W7 220 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 ZNF783Q6ZMS7 281 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 MMAAQ8IVH4 418 aaKnown RBP28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 STK40Q8N2I9 435 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 GANCQ8TET4 914 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 FRS2Q8WU20 508 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 CNPY3Q9BT09 278 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 RETREG1Q9H6L5 497 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 SGK2Q9HBY8 427 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 TMEM9BQ9NQ34 198 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 PARVAQ9NVD7 372 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 IFNKQ9P0W0 207 aa28.34■■■□□ 2.13
ATPAF1-201ENST00000329231 ILVBLA1L0T0 632 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 CCP110O43303 1012 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 ACSL1P33121 698 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 DCAF12L1Q5VU92 463 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 CCDC185Q8N715 623 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 DCAF4L2Q8NA75 395 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 DNASE2BQ8WZ79 361 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 SYN2Q92777 582 aaPredicted RBP28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 FAM129BQ96TA1 746 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 PSMB7Q99436 277 aa28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 BZW2Q9Y6E2 419 aaKnown RBP28.33■■■□□ 2.13
ATPAF1-201ENST00000329231 FTLP02792 175 aaPredicted RBP28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 TPM3P06753 285 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 PLEKP08567 350 aaPredicted RBP28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 SKILP12757 684 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 GFPT1Q06210 699 aaPredicted RBP28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 SCAPQ12770 1279 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 MANEALQ5VSG8 457 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 SLFN11Q7Z7L1 901 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 SH2D3CQ8N5H7 860 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 FBXL12Q9NXK8 326 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 ZNF212Q9UDV6 495 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 VPS51Q9UID3 782 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 HS3ST2Q9Y278 367 aa28.32■■■□□ 2.12
ATPAF1-201ENST00000329231 A0A0D9SEW6 157 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 C4orf47A7E2U8 309 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 DDX3XO00571 662 aaKnown RBP eCLIP28.31■■■□□ 2.125e-8■■■■■ 28.2
ATPAF1-201ENST00000329231 MID1O15344 667 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 SEMA4FO95754 770 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 ADH1BP00325 375 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 VAV1P15498 845 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 MAOBP27338 520 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 SLC8A1P32418 973 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 MAMLD1Q13495 774 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 DLG2Q15700 870 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 DAB2IPQ5VWQ8 1189 aa28.31■■■□□ 2.12
ATPAF1-201ENST00000329231 PLEKHA7Q6IQ23 1121 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms