RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SMOC1Q9H4F8 434 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FBRSQ9HAH7 460 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ARHGEF38Q9NXL2 777 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 VANGL2Q9ULK5 521 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MYO6Q9UM54 1294 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ERVW-1Q9UQF0 538 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 HS3ST4Q9Y661 456 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NYNRINQ9P2P1 1898 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MUC22E2RYF6 1773 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SPTBN2O15020 2390 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 A0A1B0GVM2 712 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TCAF2A6NFQ2 919 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SLC30A4O14863 429 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CLDN11O75508 207 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ENDOD1O94919 500 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SERPINC1P01008 464 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PDGFRAP16234 1089 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TFE3P19532 575 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CD6P30203 668 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FLT3P36888 993 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PTGER3P43115 390 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NSFP46459 744 aaKnown RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TPMTP51580 245 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LIMK1P53667 647 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TPM4P67936 248 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FOXK2Q01167 660 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SULT2A1Q06520 285 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ZNF33AQ06730 810 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DNAH14Q0VDD8 3507 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ZNF177Q13360 481 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NR1I3Q14994 352 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CLEC16AQ2KHT3 1053 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PLEKHG6Q3KR16 790 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 OTUD1Q5VV17 481 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LRSAM1Q6UWE0 723 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LRRC31Q6UY01 552 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ARMCX6Q7L4S7 300 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PHLDB2Q86SQ0 1253 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 C14orf80Q86SX3 495 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PHF13Q86YI8 300 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SYT12Q8IV01 421 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 APCDD1Q8J025 514 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ZNF366Q8N895 744 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TOE1Q96GM8 510 aaKnown RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MRGPRX3Q96LB0 322 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NAP1L5Q96NT1 182 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 HAPLN3Q96S86 360 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 C11orf70Q9BRQ4 267 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PRSS16Q9NQE7 514 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SEPT11Q9NVA2 429 aaKnown RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 WSB2Q9NYS7 404 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 USP36Q9P275 1121 aaKnown RBP10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PILRBQ9UKJ0 227 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
TNFRSF1A-214ENST00000543048 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 A0A1W2PQC6 194 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 TARSL2A2RTX5 802 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 DRGXA6NNA5 263 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 IGLV3-19P01714 112 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CALB1P05937 261 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 KRT3P12035 628 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ITPKAP23677 461 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 MZF1P28698 734 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 RDXP35241 583 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 HOXD12P35452 270 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 NNMTP40261 264 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CTSOP43234 321 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CDH4P55283 916 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 RPS14P62263 151 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 IRX4P78413 519 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CENPCQ03188 943 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ZBTB16Q05516 673 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 PTP4A2Q12974 167 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 DUOXA1Q1HG43 343 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 HNRNPA1L2Q32P51 320 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CCDC14Q49A88 953 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 SYCP2LQ5T4T6 812 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 STPG1Q5TH74 334 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 RNF219Q5W0B1 726 aaPredicted RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ACAD10Q6JQN1 1059 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 TRNP1Q6NT89 227 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 BNIPLQ7Z465 357 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CADM4Q8NFZ8 388 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CEP76Q8TAP6 659 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 RXFP2Q8WXD0 754 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 FOXJ1Q92949 421 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 MYO19Q96H55 970 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CFAP57Q96MR6 1250 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 FEM1AQ9BSK4 669 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 SELENOOQ9BVL4 669 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 EDEM3Q9BZQ6 932 aa10.02□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CBX8Q9HC52 389 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms