RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 PCDH18Q9HCL0 1135 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 TMPRSS4Q9NRS4 437 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 TMEM248Q9NWD8 314 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 CWC15Q9P013 229 aaKnown RBP12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 DEC1Q9P2X7 70 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 LHX6Q9UPM6 363 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 NEU3Q9UQ49 428 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 PIAS3Q9Y6X2 628 aa12.17□□□□□ -0.46
CYB561A3-214ENST00000540139 ILVBLA1L0T0 632 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 NEDD8-MDP1E9PL57 170 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 SPECC1L-ADORA2AF8WAN1 911 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 EEF2KO00418 725 aaKnown RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 DCXO43602 365 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 TSPAN3O60637 253 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 SRGAP2O75044 1071 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 CISD3P0C7P0 127 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 EPHB2P29323 1055 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 PTPN7P35236 360 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 ETFBP38117 255 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 OPRD1P41143 372 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 GRIA2P42262 883 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 CDH6P55285 790 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 RWDD2BP57060 319 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 TPI1P60174 286 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 DPYSQ14117 519 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 KRT81Q14533 505 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 MLF2Q15773 248 aaPredicted RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 CA9Q16790 459 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 SMTNL2Q2TAL5 461 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 MEI1Q5TIA1 1274 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 CPNE8Q86YQ8 564 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 RGL4Q8IZJ4 473 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 PYROXD2Q8N2H3 581 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 RTL3Q8N8U3 475 aaKnown RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 WFIKKN2Q8TEU8 576 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 HSPH1Q92598 858 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 EDAQ92838 391 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 MYEOVQ96EZ4 313 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 RBM41Q96IZ5 413 aaKnown RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 LMLNQ96KR4 655 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 NECAB3Q96P71 396 aaPredicted RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 CSPG4P5Q96PW8 444 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 OSBPL6Q9BZF3 934 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 ARHGEF3Q9NR81 526 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 TRMT1Q9NXH9 659 aaKnown RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 MUTYHQ9UIF7 546 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 MRPS17Q9Y2R5 130 aaKnown RBP12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
CYB561A3-214ENST00000540139 C3orf70A6NLC5 250 aaPredicted RBP12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 CREB3O43889 395 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 TULP3O75386 442 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 TUBB4AP04350 444 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 ZFXP17010 805 aaPredicted RBP12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 DRD1P21728 446 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 CETN2P41208 172 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 TNFRSF4P43489 277 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 SGSHP51688 502 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 NDST2P52849 883 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 VCPP55072 806 aaKnown RBP12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 YBEYP58557 167 aaPredicted RBP12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 SIGLEC14Q08ET2 396 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 CDH18Q13634 790 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 DPYSL3Q14195 570 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 RPS6KA1Q15418 735 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 PPP2R5EQ16537 467 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 FBXO43Q4G163 708 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 ATP13A4Q4VNC1 1196 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 ALFQ53S48 1182 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 ODF2Q5BJF6 829 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 PPP6R3Q5H9R7 873 aaPredicted RBP12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 TMEM196Q5HYL7 178 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 GRAMD4Q6IC98 578 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 RWDD4Q6NW29 188 aaKnown RBP12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 ZNF852Q6ZMS4 543 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 MFN1Q8IWA4 741 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 CFAP52Q8N1V2 620 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 UMODL1-AS1Q8N2C9 162 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 CHFRQ96EP1 664 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 P2RY11Q96G91 374 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 PNKPQ96T60 521 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 P2RY13Q9BPV8 354 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 MAGEB5Q9BZ81 275 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 GOLPH3Q9H4A6 298 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 HEBP1Q9NRV9 189 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 GPATCH2LQ9NWQ4 482 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 FBXL21Q9UKT6 434 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 STARD13Q9Y3M8 1113 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 HYOU1Q9Y4L1 999 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 SNX10Q9Y5X0 201 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.46
CYB561A3-214ENST00000540139 LRRD1A4D1F6 860 aa12.14□□□□□ -0.47
CYB561A3-214ENST00000540139 SHISA7A6NL88 538 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms