RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CNGA2Q16280 664 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 DCAF6Q58WW2 860 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 KRBA2Q6ZNG9 492 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 DSG4Q86SJ6 1040 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 LGI2Q8N0V4 545 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 CACTIN-AS1Q8N1I8 211 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 CLEC4CQ8WTT0 213 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 PTPRN2Q92932 1015 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 SNX21Q969T3 373 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 FAM149B1Q96BN6 582 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 FCRL2Q96LA5 508 aaPredicted RBP14.73□□□□□ -0.05
VARS-228ENST00000495010 HSFY1Q96LI6 401 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 LGMNQ99538 433 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 SART1O43290 800 aaKnown RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 SDC3O75056 442 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 PLA2G2AP14555 144 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 MZF1P28698 734 aaPredicted RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 MAT2AP31153 395 aaKnown RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 PPP2CBP62714 309 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 PPP2CAP67775 309 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 KRT85P78386 507 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 SULT2A1Q06520 285 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 OVGP1Q12889 678 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 NNTQ13423 1086 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 SLC12A1Q13621 1099 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 PKP1Q13835 747 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 TBC1D25Q3MII6 688 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 TAF1BQ53T94 588 aaPredicted RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 SFMBT2Q5VUG0 894 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 BROXQ5VW32 411 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 FAM46CQ5VWP2 391 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 KDM7AQ6ZMT4 941 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 IQCHQ86VS3 1027 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 CHSY1Q86X52 802 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 SPATS2Q86XZ4 545 aaKnown RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 SMYD4Q8IYR2 804 aaPredicted RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 APCDD1Q8J025 514 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 DQX1Q8TE96 717 aaKnown RBP14.72□□□□□ -0.05
VARS-228ENST00000495010 OR8D1Q8WZ84 308 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 TFAP2BQ92481 460 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 MYEOVQ96EZ4 313 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 SPAG5Q96R06 1193 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 TRIM62Q9BVG3 475 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 KDM4CQ9H3R0 1056 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 ST7Q9NRC1 585 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 CYTH4Q9UIA0 394 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 DMTF1Q9Y222 760 aa14.72□□□□□ -0.05
VARS-228ENST00000495010 LOC400499M0QZD8 3231 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 SMG1Q96Q15 3661 aaKnown RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 F5H5T6 163 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 SLC7A4O43246 635 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 LATO43561 262 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 ZNF18P17022 549 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 TACR2P21452 398 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 ACP1P24666 158 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 BRD2P25440 801 aaKnown RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 STK19P49842 368 aaPredicted RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 FKBP3Q00688 224 aaKnown RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 INSM1Q01101 510 aaPredicted RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 CFHR1Q03591 330 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 ACCSLQ4AC99 568 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 SETMARQ53H47 684 aaPredicted RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 RAP1GAP2Q684P5 730 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 ZNF843Q8N446 348 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 RFFLQ8WZ73 363 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 KLHDC7BQ96G42 594 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 NT5C1BQ96P26 610 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 PPP1R9BQ96SB3 815 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 RMND1Q9NWS8 449 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 ARMCX3Q9UH62 379 aaPredicted RBP14.71□□□□□ -0.05
VARS-228ENST00000495010 SLC12A6Q9UHW9 1150 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.05
VARS-228ENST00000495010 MYLKQ15746 1914 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 C1QTNF3-AMACRE9PGA6 284 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 PRAMEF26H0Y7S4 382 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 SIGLEC6O43699 453 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 RTN2O75298 545 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 GABBR2O75899 941 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 MT-CO3P00414 261 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 DRD3P35462 400 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 TLE3Q04726 772 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 CETN1Q12798 172 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 ZNF211Q13398 564 aaPredicted RBP14.7□□□□□ -0.06
VARS-228ENST00000495010 PROX2Q3B8N5 592 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 SPACA3Q8IXA5 215 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 PPM1KQ8N3J5 372 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 UBR7Q8N806 425 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 ATP6V0D2Q8N8Y2 350 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 DCBLD1Q8N8Z6 715 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 ZNF248Q8NDW4 579 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 SLC39A13Q96H72 371 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 NAF1Q96HR8 494 aaKnown RBP14.7□□□□□ -0.06
VARS-228ENST00000495010 BTN2A3PQ96KV6 586 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 ARHGAP20Q9P2F6 1191 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 SLC25A13Q9UJS0 675 aa14.7□□□□□ -0.06
VARS-228ENST00000495010 FAM237AA0A1B0GTK4 181 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 C10orf142B7Z368 130 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 ERVH48-1M5A8F1 160 aa14.69□□□□□ -0.06
VARS-228ENST00000495010 PLRG1O43660 514 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms