RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 GRK6P43250 576 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 MTIF2P46199 727 aaKnown RBP20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 GALCP54803 685 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 C21orf59P57076 290 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 PITX1P78337 314 aaPredicted RBP20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 TAF5Q15542 800 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 INAVAQ3KP66 663 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 LRSAM1Q6UWE0 723 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 C11orf57Q6ZUT1 292 aaPredicted RBP20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 PASD1Q8IV76 773 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 PNPLA1Q8N8W4 532 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 SERGEFQ9UGK8 458 aa20.1■□□□□ 0.81
R3HDM1-215ENST00000483021 VILLO15195 856 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 PCDHGA12O60330 932 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 PDGFRAP16234 1089 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 KRT9P35527 623 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 PSMD8P48556 350 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 PLK1P53350 603 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 TPD52L1Q16890 204 aaPredicted RBP20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 NCEH1Q6PIU2 408 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 LAYNQ6UX15 382 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 SND1Q7KZF4 910 aaKnown RBP eCLIP20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 IRF2BP1Q8IU81 584 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 FAM114A1Q8IWE2 563 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 WDTC1Q8N5D0 677 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 PTPRN2Q92932 1015 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 RPL10LQ96L21 214 aaKnown RBP20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 NEUROG2Q9H2A3 272 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 SLCO3A1Q9UIG8 710 aa20.09■□□□□ 0.81
R3HDM1-215ENST00000483021 ITPR1Q14643 2758 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SYNJ2BP-COX16A0A087WUM0 186 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 DAB1O75553 588 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 GOT1P17174 413 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 MZF1P28698 734 aaPredicted RBP20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 STK19P49842 368 aaPredicted RBP20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 VASPP50552 380 aaPredicted RBP20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 CCR5P51681 352 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 MAN2A1Q16706 1144 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 OR6B2Q6IFH4 312 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 OLFML1Q6UWY5 402 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 FAM183BPQ6ZVS7 135 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SLC26A9Q7LBE3 791 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SLCO6A1Q86UG4 719 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 CIR1Q86X95 450 aaPredicted RBP20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 ZDHHC17Q8IUH5 632 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 STK40Q8N2I9 435 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 C1orf131Q8NDD1 294 aaKnown RBP20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SLC6A18Q96N87 628 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 RPRD1AQ96P16 312 aaPredicted RBP20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SPAG5Q96R06 1193 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 FAM129BQ96TA1 746 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SYNCQ9H7C4 482 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 COX16Q9P0S2 106 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 SLC25A13Q9UJS0 675 aa20.08■□□□□ 0.81
R3HDM1-215ENST00000483021 COL5A1P20908 1838 aaPredicted RBP20.08■□□□□ 0.8
R3HDM1-215ENST00000483021 H0Y8X5 98 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 GRAP2O75791 330 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 IL1BP01584 269 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 PRKCSHP14314 528 aaPredicted RBP20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 ADPRHP54922 357 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 APBA1Q02410 837 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 CXorf57Q6NSI4 855 aaKnown RBP20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 FBXL22Q6P050 247 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 CCNI2Q6ZMN8 369 aaPredicted RBP20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 DSG4Q86SJ6 1040 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 AADATQ8N5Z0 425 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 TOR4AQ9NXH8 423 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 RRN3Q9NYV6 651 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 DNAJC12Q9UKB3 198 aa20.07■□□□□ 0.8
R3HDM1-215ENST00000483021 C10orf142B7Z368 130 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 TNFSF14O43557 240 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 DKK1O94907 266 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 ERBB2P04626 1255 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 NOS2P35228 1153 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 BPIFB4P59827 614 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 SLC6A3Q01959 620 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 NME3Q13232 169 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 AUHQ13825 339 aaKnown RBP20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 PTPN20Q4JDL3 420 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 PROSER1Q86XN7 944 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 ZNF397Q8NF99 534 aaPredicted RBP20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 NBEAQ8NFP9 2946 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 OR14C36Q8NHC7 312 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 OR8D1Q8WZ84 308 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 SIX2Q9NPC8 291 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 AASDHPPTQ9NRN7 309 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 VANGL2Q9ULK5 521 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 BTBD3Q9Y2F9 522 aa20.06■□□□□ 0.8
R3HDM1-215ENST00000483021 ACACAQ13085 2346 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 A0A1B0GTQ1 180 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 SLC7A4O43246 635 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 CLDN11O75508 207 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 ATXN1LP0C7T5 689 aaKnown RBP20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 CD38P28907 300 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 CENPCQ03188 943 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 SCAPQ12770 1279 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 ZNF177Q13360 481 aaPredicted RBP20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 SLC45A4Q5BKX6 768 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 KCNT1Q5JUK3 1230 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms