RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SATB1Q01826 763 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 TFDP2Q14188 446 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 DPYSL3Q14195 570 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 TAZQ16635 292 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 PPP6R3Q5H9R7 873 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-205ENST00000473879 NAIF1Q69YI7 327 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-205ENST00000473879 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 RHBDF2Q6PJF5 856 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 TSSK4Q6SA08 328 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 UNC45BQ8IWX7 931 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 BBS7Q8IWZ6 715 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 FAM217AQ8IXS0 508 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 ZBTB44Q8NCP5 570 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 SPATA4Q8NEY3 305 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-205ENST00000473879 PLD4Q96BZ4 506 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 SLC39A13Q96H72 371 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 FCRL2Q96LA5 508 aaPredicted RBP13.67□□□□□ -0.22
BRAT1-205ENST00000473879 HAPLN3Q96S86 360 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 EPAS1Q99814 870 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 STOML2Q9UJZ1 356 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 LSM7Q9UK45 103 aaKnown RBP13.67□□□□□ -0.22
BRAT1-205ENST00000473879 R4GN57 208 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 CFAP54Q96N23 3096 aa13.67□□□□□ -0.22
BRAT1-205ENST00000473879 PRR23AA6NEV1 266 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 SCAMP3O14828 347 aaKnown RBP13.66□□□□□ -0.22
BRAT1-205ENST00000473879 GFRA3O60609 400 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 LILRB5O75023 590 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 ATG13O75143 517 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 IRF1P10914 325 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 ADH5P11766 374 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 EIF2DP41214 584 aaKnown RBP13.66□□□□□ -0.22
BRAT1-205ENST00000473879 GAD2Q05329 585 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 CA9Q16790 459 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 KAZNQ674X7 775 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 RFX6Q8HWS3 928 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 CCDC26Q8TAB7 109 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 FAF2Q96CS3 445 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 P2RY11Q96G91 374 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 BTN2A3PQ96KV6 586 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 KCTD15Q96SI1 283 aaPredicted RBP13.66□□□□□ -0.22
BRAT1-205ENST00000473879 OSBPL2Q9H1P3 480 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 SMARCAL1Q9NZC9 954 aa13.66□□□□□ -0.22
BRAT1-205ENST00000473879 EFCAB8A8MWE9 144 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 KCNU1A8MYU2 1149 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 K7ESF4 209 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 EEF2KO00418 725 aaKnown RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 RNF40O75150 1001 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 STC2O76061 302 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 KLKB1P03952 638 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 CD48P09326 243 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 KRT10P13645 584 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 ZFXP17010 805 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 HOXA6P31267 233 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 HARS2P49590 506 aaKnown RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 TPI1P60174 286 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 NRG1Q02297 640 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 KLF1Q13351 362 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 ANKRD20A8PQ5CZ79 823 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 CCDC70Q6NSX1 233 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 BBS12Q6ZW61 710 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 TTC13Q8NBP0 860 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 TSC1Q92574 1164 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 EZH1Q92800 747 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 HEMGNQ9BXL5 484 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 FRMD8P1Q9BZ68 369 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-205ENST00000473879 SPHK2Q9NRA0 654 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 ZNF510Q9Y2H8 683 aa13.65□□□□□ -0.22
BRAT1-205ENST00000473879 A0A0A0MRY4 1105 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-205ENST00000473879 APOL1O14791 398 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 DAPK3O43293 454 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 CREB3O43889 395 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 PAGE1O75459 146 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 LATS1O95835 1130 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 LMNAP02545 664 aaKnown RBP13.64□□□□□ -0.23
BRAT1-205ENST00000473879 HMBSP08397 361 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 TGM2P21980 687 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 SLC6A11P48066 632 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 HCAR3P49019 387 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 SLC11A2P49281 568 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 C2orf54Q08AI8 447 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 SEMA3BQ13214 749 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 PKN3Q6P5Z2 889 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 ADAT2Q7Z6V5 191 aaKnown RBP13.64□□□□□ -0.23
BRAT1-205ENST00000473879 ETFBKMTQ8IXQ9 262 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 PYROXD2Q8N2H3 581 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 C12orf50Q8NA57 414 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-205ENST00000473879 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
BRAT1-205ENST00000473879 CSPG4P5Q96PW8 444 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms