RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 MT-ND3P03897 115 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 PTPN1P18031 435 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 MATN1P21941 496 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 CCND2P30279 289 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 SSTR3P32745 418 aaPredicted RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 ADD2P35612 726 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 ABCG1P45844 678 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 TAP1Q03518 808 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 BST1Q10588 318 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 MMRN1Q13201 1228 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 BRMS1LQ5PSV4 323 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 RNASEH2BQ5TBB1 312 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 C16orf46Q6P387 395 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 TFAP2DQ7Z6R9 452 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 FRS2Q8WU20 508 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 PDCD6IPQ8WUM4 868 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 TFB1MQ8WVM0 346 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 C12orf65Q9H3J6 166 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 FAM96AQ9H5X1 160 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 ERVMER34-1Q9H9K5 563 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 FANCFQ9NPI8 374 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 DDX28Q9NUL7 540 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 SYBUQ9NX95 663 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 MAP3K20Q9NYL2 800 aaKnown RBP10.96□□□□□ -0.66
LINC00342-202ENST00000448494 MTRRQ9UBK8 725 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.66
LINC00342-202ENST00000448494 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 MYMKA6NI61 221 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 PLOD2O00469 737 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 BCAS2O75934 225 aaPredicted RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 KCNK2O95069 426 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 IFNA16P05015 189 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 KRT7P08729 469 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 IL6STP40189 918 aaPredicted RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 MLLT3P42568 568 aaPredicted RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 NR2C2P49116 596 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 RGS7P49802 495 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SP140Q13342 867 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 KRR1Q13601 381 aaKnown RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CARTPTQ16568 116 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 TEX44Q53QW1 395 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 LDLRAP1Q5SW96 308 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 C6orf132Q5T0Z8 1188 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SDE2Q6IQ49 451 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 C16orf89Q6UX73 402 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ATG14Q6ZNE5 492 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CTAGE3PQ8IX95 158 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SHCBP1Q8NEM2 672 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 E2F7Q96AV8 911 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 HDAC11Q96DB2 347 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CALML4Q96GE6 196 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 GLT1D1Q96MS3 346 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 MTG1Q9BT17 334 aaPredicted RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 NYXQ9GZU5 481 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CD93Q9NPY3 652 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CYP26B1Q9NR63 512 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CHST7Q9NS84 486 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ACTR3BQ9P1U1 418 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 DIMT1Q9UNQ2 313 aaKnown RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ZNF175Q9Y473 711 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 A0A0X1KG70 313 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ATG13O75143 517 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SNNO75324 88 aaPredicted RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SERPINI2O75830 405 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 KRT37O76014 449 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CDK14O94921 469 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 RETP07949 1114 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SOX5P35711 763 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 MAGEA11P43364 429 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SCRN3Q0VDG4 424 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 C11orf96Q7Z7L8 435 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 C12orf56Q8IXR9 622 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 FANK1Q8TC84 345 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 TGFBRAP1Q8WUH2 860 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ZFYVE19Q96K21 471 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 RIPOR3Q96MK2 946 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 IL12RB2Q99665 862 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 GDF15Q99988 308 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 BEGAINQ9BUH8 593 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ZC3H12CQ9C0D7 883 aaKnown RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SIX2Q9NPC8 291 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 ACOXLQ9NUZ1 547 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
LINC00342-202ENST00000448494 SLC39A1Q9NY26 324 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 GGA3Q9NZ52 723 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 FNIP2Q9P278 1114 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 VWA7Q9Y334 891 aa10.95□□□□□ -0.66
LINC00342-202ENST00000448494 CLDN3O15551 220 aa10.94□□□□□ -0.66
LINC00342-202ENST00000448494 NOS1APO75052 506 aaPredicted RBP10.94□□□□□ -0.66
LINC00342-202ENST00000448494 ADAM11O75078 769 aa10.94□□□□□ -0.66
LINC00342-202ENST00000448494 USP12O75317 370 aa10.94□□□□□ -0.66
LINC00342-202ENST00000448494 KCNH1O95259 989 aa10.94□□□□□ -0.66
LINC00342-202ENST00000448494 ARNTP27540 789 aa10.94□□□□□ -0.66
LINC00342-202ENST00000448494 HSD17B2P37059 387 aa10.94□□□□□ -0.66
LINC00342-202ENST00000448494 DDOSTP39656 456 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms