RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 POU6F2P78424 691 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 SNTA1Q13424 505 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 HYIQ5T013 277 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 IZUMO3Q5VZ72 239 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 FAM205BPQ63HN1 556 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 UNC5DQ6UXZ4 953 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TICAM1Q8IUC6 712 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 NDUFAF2Q8N183 169 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 FAM111AQ96PZ2 611 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 SLC2A11Q9BYW1 496 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TXNDC16Q9P2K2 825 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ATP11BQ9Y2G3 1177 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 B8ZZF3 427 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TMEM253P0C7T8 217 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 YWHABP31946 246 aaKnown RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 KCTD2Q14681 263 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 STXBP2Q15833 593 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 NRF1Q16656 503 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 CLVS2Q5SYC1 327 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 SHEQ5VZ18 495 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 RIOX2Q8IUF8 465 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 KIAA1958Q8N8K9 716 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF398Q8TD17 642 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 LRGUKQ96M69 825 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 MMP19Q99542 508 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 FERMT1Q9BQL6 677 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 TRIT1Q9H3H1 467 aaKnown RBP10.54□□□□□ -0.72
SF3B2-201ENST00000322535 XPNPEP1Q9NQW7 623 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 DAPK2Q9UIK4 370 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 WDR90Q96KV7 1748 aa10.54□□□□□ -0.72
SF3B2-201ENST00000322535 C1orf232A0A0U1RR37 186 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 TYW5A2RUC4 315 aaKnown RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 RNASEH2AO75792 299 aaKnown RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 FAM13AO94988 1023 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 OSBPP22059 807 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 QARSP47897 775 aaKnown RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 NR2C2P49116 596 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 GNG2P59768 71 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 POLR2GP62487 172 aaKnown RBP eCLIP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 PHC1P78364 1004 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 CDKL1Q00532 357 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 APOFQ13790 326 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ANO4Q32M45 955 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 PPP6R3Q5H9R7 873 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ODR4Q5SWX8 454 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 RHBDF2Q6PJF5 856 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 DENND5BQ6ZUT9 1274 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 TTLQ8NG68 377 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 SLC22A8Q8TCC7 542 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 TMA16Q96EY4 203 aaKnown RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 BTBD9Q96Q07 612 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 JPH1Q9HDC5 661 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 IGSF5Q9NSI5 407 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 A0A1W2PPW3 197 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ATP6V1G2-DDX39BF2Z307 99 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 TK2O00142 265 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 SCO2O43819 266 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 TYROBPO43914 113 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 NDUFS2O75306 463 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 XRCC5P13010 732 aaKnown RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 KRT10P13645 584 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 SLC26A3P40879 764 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 OAZ1P54368 228 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 AQP5P55064 265 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ACTR2P61160 394 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 HSDL1Q3SXM5 330 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 MTERF2Q49AM1 385 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 LDLRAP1Q5SW96 308 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 PRAMEF19Q5SWL8 479 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ZSWIM2Q8NEG5 633 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ANGPTL6Q8NI99 470 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ELMO3Q96BJ8 720 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 C12orf43Q96C57 262 aaKnown RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 FAM84AQ96KN4 292 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 CFAP57Q96MR6 1250 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 RIT2Q99578 217 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 ZNF717Q9BY31 904 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 HOXD1Q9GZZ0 328 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 SEPT9Q9UHD8 586 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-201ENST00000322535 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 PCDHA2Q9Y5H9 948 aa10.53□□□□□ -0.72
SF3B2-201ENST00000322535 BMP10O95393 424 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 FTLP02792 175 aaPredicted RBP10.52□□□□□ -0.72
SF3B2-201ENST00000322535 P4HBP07237 508 aaKnown RBP10.52□□□□□ -0.72
SF3B2-201ENST00000322535 M6PRP20645 277 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 CD247P20963 164 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 GJC1P36383 396 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 CASP4P49662 377 aa10.52□□□□□ -0.72
SF3B2-201ENST00000322535 NDST2P52849 883 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms