RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX1	YPR065W	GAS1	P22146	559 aa	Known RBP	4.95	□□□□□ -1.62
ROX1	YPR065W	SIS2	P36024	562 aa		4.95	□□□□□ -1.62
ROX1	YPR065W	GCD1	P09032	578 aa	Predicted RBP	4.94	□□□□□ -1.62
ROX1	YPR065W	HDA2	Q06629	674 aa		4.94	□□□□□ -1.62
ROX1	YPR065W	ELG1	Q12050	791 aa		4.94	□□□□□ -1.62
ROX1	YPR065W	TRS33	Q99394	268 aa		4.94	□□□□□ -1.62
ROX1	YPR065W	TIF1	P10081	395 aa	Known RBP	4.93	□□□□□ -1.62
ROX1	YPR065W	BSD2	P38356	321 aa		4.93	□□□□□ -1.62
ROX1	YPR065W	YHL008C	P38750	627 aa		4.93	□□□□□ -1.62
ROX1	YPR065W	TAF1	P46677	1066 aa		4.93	□□□□□ -1.62
ROX1	YPR065W	ROM1	P53046	1155 aa		4.93	□□□□□ -1.62
ROX1	YPR065W	CAB1	Q04430	367 aa		4.93	□□□□□ -1.62
ROX1	YPR065W	YOR059C	Q08448	450 aa	Known RBP	4.93	□□□□□ -1.62
ROX1	YPR065W	RPL34B	P40525	121 aa	Known RBP	4.92	□□□□□ -1.62
ROX1	YPR065W	CDA2	Q06703	312 aa		4.92	□□□□□ -1.62
ROX1	YPR065W	GAL2	P13181	574 aa		4.91	□□□□□ -1.62
ROX1	YPR065W	TSA1	P34760	196 aa	Known RBP	4.91	□□□□□ -1.62
ROX1	YPR065W	MMM1	P41800	426 aa		4.91	□□□□□ -1.62
ROX1	YPR065W	CIT3	P43635	486 aa		4.91	□□□□□ -1.62
ROX1	YPR065W	BIM1	P40013	344 aa		4.9	□□□□□ -1.63
ROX1	YPR065W	FAR11	P53917	953 aa		4.9	□□□□□ -1.63
ROX1	YPR065W	THI80	P35202	319 aa		4.89	□□□□□ -1.63
ROX1	YPR065W	KTR7	P40504	517 aa		4.89	□□□□□ -1.63
ROX1	YPR065W	FUS1	P11710	512 aa		4.88	□□□□□ -1.63
ROX1	YPR065W	ATG32	P40458	529 aa		4.88	□□□□□ -1.63
ROX1	YPR065W	KIP3	P53086	805 aa	Known RBP	4.88	□□□□□ -1.63
ROX1	YPR065W	ORC3	P54790	616 aa		4.88	□□□□□ -1.63
ROX1	YPR065W	GSF2	Q04697	403 aa	Known RBP	4.88	□□□□□ -1.63
ROX1	YPR065W	PRP6	P19735	899 aa	Predicted RBP	4.87	□□□□□ -1.63
ROX1	YPR065W	HSP78	P33416	811 aa		4.87	□□□□□ -1.63
ROX1	YPR065W	HGH1	P48362	394 aa	Known RBP	4.87	□□□□□ -1.63
ROX1	YPR065W	ALD3	P54114	506 aa		4.87	□□□□□ -1.63
ROX1	YPR065W	MSN1	P22148	382 aa		4.86	□□□□□ -1.63
ROX1	YPR065W	TFA2	P36145	328 aa		4.86	□□□□□ -1.63
ROX1	YPR065W	BOI1	P38041	980 aa	Known RBP	4.86	□□□□□ -1.63
ROX1	YPR065W	YNR065C	P53751	1116 aa		4.86	□□□□□ -1.63
ROX1	YPR065W	EMG1	Q06287	252 aa	Known RBP	4.86	□□□□□ -1.63
ROX1	YPR065W	SUV3	P32580	737 aa		4.85	□□□□□ -1.63
ROX1	YPR065W	YBR197C	P38306	217 aa		4.85	□□□□□ -1.63
ROX1	YPR065W	FIR1	P40020	876 aa		4.85	□□□□□ -1.63
ROX1	YPR065W	RCM1	P53972	490 aa		4.85	□□□□□ -1.63
ROX1	YPR065W	YOR223W	Q12015	292 aa		4.85	□□□□□ -1.63
ROX1	YPR065W	ERS1	P17261	260 aa		4.84	□□□□□ -1.63
ROX1	YPR065W	FLR1	P38124	548 aa		4.84	□□□□□ -1.63
ROX1	YPR065W	AIM46	P38885	310 aa		4.84	□□□□□ -1.63
ROX1	YPR065W	NEO1	P40527	1151 aa		4.84	□□□□□ -1.63
ROX1	YPR065W	MSH6	Q03834	1242 aa		4.84	□□□□□ -1.63
ROX1	YPR065W	YLL054C	Q12244	843 aa		4.84	□□□□□ -1.63
ROX1	YPR065W	FOX2	Q02207	900 aa	Known RBP	4.83	□□□□□ -1.64
ROX1	YPR065W	ADP1	P25371	1049 aa		4.82	□□□□□ -1.64
ROX1	YPR065W	WHI3	P34761	661 aa	Known RBP	4.82	□□□□□ -1.64
ROX1	YPR065W	HVG1	P0CE11	249 aa		4.81	□□□□□ -1.64
ROX1	YPR065W	HAS1	Q03532	505 aa	Known RBP	4.81	□□□□□ -1.64
ROX1	YPR065W	OYE3	P41816	400 aa	Predicted RBP	4.8	□□□□□ -1.64
ROX1	YPR065W	YJR124C	P47159	448 aa		4.8	□□□□□ -1.64
ROX1	YPR065W	TAD3	Q9URQ3	322 aa		4.8	□□□□□ -1.64
ROX1	YPR065W	GPT2	P36148	743 aa		4.78	□□□□□ -1.64
ROX1	YPR065W	HXT8	P40886	569 aa		4.78	□□□□□ -1.64
ROX1	YPR065W	ISC10	P32645	267 aa		4.77	□□□□□ -1.65
ROX1	YPR065W	RIM8	P53179	542 aa		4.77	□□□□□ -1.65
ROX1	YPR065W	YMR074C	Q04773	145 aa		4.77	□□□□□ -1.65
ROX1	YPR065W	FET4	P40988	552 aa		4.76	□□□□□ -1.65
ROX1	YPR065W	GLO4	Q12320	285 aa		4.76	□□□□□ -1.65
ROX1	YPR065W	NTA1	P40354	457 aa		4.75	□□□□□ -1.65
ROX1	YPR065W	ALD4	P46367	519 aa	Known RBP	4.74	□□□□□ -1.65
ROX1	YPR065W	GCV1	P48015	400 aa		4.74	□□□□□ -1.65
ROX1	YPR065W	DOT1	Q04089	582 aa	Known RBP	4.74	□□□□□ -1.65
ROX1	YPR065W	PUF6	Q04373	656 aa	Known RBP	4.74	□□□□□ -1.65
ROX1	YPR065W	TRE1	Q08919	783 aa		4.74	□□□□□ -1.65
ROX1	YPR065W	RPS4A	P0CX35	261 aa	Known RBP	4.73	□□□□□ -1.65
ROX1	YPR065W	RPS4B	P0CX36	261 aa	Known RBP	4.73	□□□□□ -1.65
ROX1	YPR065W	TGL4	P36165	910 aa		4.73	□□□□□ -1.65
ROX1	YPR065W	RGD2	P43556	714 aa		4.73	□□□□□ -1.65
ROX1	YPR065W	NFS1	P25374	497 aa		4.72	□□□□□ -1.65
ROX1	YPR065W	YPT53	P36019	220 aa		4.72	□□□□□ -1.65
ROX1	YPR065W	AIM3	P38266	947 aa	Known RBP	4.72	□□□□□ -1.65
ROX1	YPR065W	ECM23	Q02710	187 aa		4.72	□□□□□ -1.65
ROX1	YPR065W	SSY1	Q03770	852 aa		4.72	□□□□□ -1.65
ROX1	YPR065W	ABZ1	P37254	787 aa	Predicted RBP	4.71	□□□□□ -1.66
ROX1	YPR065W	MRPL22	P53881	309 aa		4.71	□□□□□ -1.66
ROX1	YPR065W	LPX1	Q12405	387 aa	Known RBP	4.71	□□□□□ -1.66
ROX1	YPR065W	SOD2	P00447	233 aa		4.7	□□□□□ -1.66
ROX1	YPR065W	ALT1	P52893	592 aa		4.7	□□□□□ -1.66
ROX1	YPR065W	UBX7	P38349	436 aa		4.69	□□□□□ -1.66
ROX1	YPR065W	PEX7	P39108	375 aa		4.69	□□□□□ -1.66
ROX1	YPR065W	SRS2	P12954	1174 aa		4.68	□□□□□ -1.66
ROX1	YPR065W	IRS4	P36115	615 aa	Known RBP	4.68	□□□□□ -1.66
ROX1	YPR065W	YIG1	Q08956	461 aa		4.68	□□□□□ -1.66
ROX1	YPR065W	YVC1	Q12324	675 aa		4.68	□□□□□ -1.66
ROX1	YPR065W	PNS1	Q12412	539 aa		4.68	□□□□□ -1.66
ROX1	YPR065W	PUN1	Q06991	263 aa		4.67	□□□□□ -1.66
ROX1	YPR065W	APC11	Q12157	165 aa		4.67	□□□□□ -1.66
ROX1	YPR065W	PRO1	P32264	428 aa		4.66	□□□□□ -1.66
ROX1	YPR065W	SMC1	P32908	1225 aa		4.66	□□□□□ -1.66
ROX1	YPR065W	RAD55	P38953	406 aa		4.66	□□□□□ -1.66
ROX1	YPR065W	MSH4	P40965	878 aa	Predicted RBP	4.66	□□□□□ -1.66
ROX1	YPR065W	YLR358C	O13565	187 aa		4.65	□□□□□ -1.67
ROX1	YPR065W	TUB2	P02557	457 aa	Known RBP	4.65	□□□□□ -1.67
ROX1	YPR065W	PYC2	P32327	1180 aa	Known RBP	4.65	□□□□□ -1.67
ROX1	YPR065W	PSY2	P40164	858 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 61 ms