RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	GPI13	Q07830	1017 aa		4.84	□□□□□ -1.63
HAA1	YPR008W	PYC2	P32327	1180 aa	Known RBP	4.84	□□□□□ -1.64
HAA1	YPR008W	DUR3	P33413	735 aa		4.84	□□□□□ -1.64
HAA1	YPR008W	RRM3	P38766	723 aa		4.84	□□□□□ -1.64
HAA1	YPR008W	GIP2	P40036	548 aa		4.84	□□□□□ -1.64
HAA1	YPR008W	AMN1	P38285	549 aa	Predicted RBP	4.83	□□□□□ -1.64
HAA1	YPR008W	TRS120	Q04183	1289 aa		4.83	□□□□□ -1.64
HAA1	YPR008W	RSC2	Q06488	889 aa		4.83	□□□□□ -1.64
HAA1	YPR008W	TY4B-P	A0A0B7P3V8	1104 aa		4.82	□□□□□ -1.64
HAA1	YPR008W	RSC4	Q02206	625 aa		4.82	□□□□□ -1.64
HAA1	YPR008W	TY4A-H	Q6Q5P6	413 aa		4.82	□□□□□ -1.64
HAA1	YPR008W	HVG1	P0CE11	249 aa		4.82	□□□□□ -1.64
HAA1	YPR008W	FUS1	P11710	512 aa		4.82	□□□□□ -1.64
HAA1	YPR008W	NUT2	Q06213	157 aa		4.82	□□□□□ -1.64
HAA1	YPR008W	UFD2	P54860	961 aa		4.81	□□□□□ -1.64
HAA1	YPR008W	SOG2	Q08817	791 aa		4.81	□□□□□ -1.64
HAA1	YPR008W	YNR065C	P53751	1116 aa		4.81	□□□□□ -1.64
HAA1	YPR008W	GLO4	Q12320	285 aa		4.81	□□□□□ -1.64
HAA1	YPR008W	YBR287W	P38355	427 aa		4.8	□□□□□ -1.64
HAA1	YPR008W	YJR124C	P47159	448 aa		4.8	□□□□□ -1.64
HAA1	YPR008W	SLP1	Q12232	587 aa		4.8	□□□□□ -1.64
HAA1	YPR008W	TAT1	P38085	619 aa		4.79	□□□□□ -1.64
HAA1	YPR008W	PAN5	P38787	379 aa		4.79	□□□□□ -1.64
HAA1	YPR008W	YNL011C	P53980	444 aa		4.79	□□□□□ -1.64
HAA1	YPR008W	AI3	P03877	415 aa		4.79	□□□□□ -1.64
HAA1	YPR008W	SSF1	P38789	453 aa	Predicted RBP	4.79	□□□□□ -1.64
HAA1	YPR008W	LSB6	P42951	607 aa		4.79	□□□□□ -1.64
HAA1	YPR008W	TY1A-NL1	Q12391	440 aa	Known RBP	4.78	□□□□□ -1.64
HAA1	YPR008W	YHL050C	P38721	697 aa		4.77	□□□□□ -1.65
HAA1	YPR008W	YHR219W	P38900	624 aa		4.77	□□□□□ -1.65
HAA1	YPR008W	POL5	P39985	1022 aa	Known RBP	4.77	□□□□□ -1.65
HAA1	YPR008W	GUP1	P53154	560 aa		4.77	□□□□□ -1.65
HAA1	YPR008W	CDC55	Q00362	526 aa		4.77	□□□□□ -1.65
HAA1	YPR008W	YPL034W	Q03083	165 aa		4.77	□□□□□ -1.65
HAA1	YPR008W	HAS1	Q03532	505 aa	Known RBP	4.77	□□□□□ -1.65
HAA1	YPR008W	SAC7	P17121	654 aa		4.76	□□□□□ -1.65
HAA1	YPR008W	RIM11	P38615	370 aa		4.76	□□□□□ -1.65
HAA1	YPR008W	BSC2	Q05611	235 aa		4.76	□□□□□ -1.65
HAA1	YPR008W	CMR1	Q12510	522 aa	Known RBP	4.76	□□□□□ -1.65
HAA1	YPR008W	NEO1	P40527	1151 aa		4.75	□□□□□ -1.65
HAA1	YPR008W	ERS1	P17261	260 aa		4.74	□□□□□ -1.65
HAA1	YPR008W	SFA1	P32771	386 aa		4.74	□□□□□ -1.65
HAA1	YPR008W	PGM1	P33401	570 aa	Known RBP	4.74	□□□□□ -1.65
HAA1	YPR008W	FLP1	P03870	423 aa		4.74	□□□□□ -1.65
HAA1	YPR008W	NPR1	P22211	790 aa		4.74	□□□□□ -1.65
HAA1	YPR008W	ARI1	P53111	347 aa	Known RBP	4.74	□□□□□ -1.65
HAA1	YPR008W	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
HAA1	YPR008W	WHI5	Q12416	295 aa		4.74	□□□□□ -1.65
HAA1	YPR008W	DSE4	P53753	1117 aa		4.73	□□□□□ -1.65
HAA1	YPR008W	YHL008C	P38750	627 aa		4.73	□□□□□ -1.65
HAA1	YPR008W	MSH6	Q03834	1242 aa		4.73	□□□□□ -1.65
HAA1	YPR008W	TOS4	Q06266	489 aa		4.73	□□□□□ -1.65
HAA1	YPR008W	PRP5	P21372	849 aa	Predicted RBP	4.72	□□□□□ -1.65
HAA1	YPR008W	NAM7	P30771	971 aa	Known RBP	4.72	□□□□□ -1.65
HAA1	YPR008W	MET4	P32389	672 aa		4.72	□□□□□ -1.65
HAA1	YPR008W	FET4	P40988	552 aa		4.72	□□□□□ -1.65
HAA1	YPR008W	LEM3	P42838	414 aa		4.72	□□□□□ -1.65
HAA1	YPR008W	NCE103	P53615	221 aa		4.72	□□□□□ -1.65
HAA1	YPR008W	SPO71	Q03868	1245 aa		4.72	□□□□□ -1.65
HAA1	YPR008W	ELG1	Q12050	791 aa		4.72	□□□□□ -1.65
HAA1	YPR008W	NUT1	P53114	1132 aa		4.71	□□□□□ -1.65
HAA1	YPR008W	REC8	Q12188	680 aa		4.71	□□□□□ -1.65
HAA1	YPR008W	SAP155	P43612	1002 aa		4.71	□□□□□ -1.66
HAA1	YPR008W	MON1	P53129	644 aa		4.71	□□□□□ -1.66
HAA1	YPR008W	SEN54	Q02825	467 aa	Predicted RBP	4.71	□□□□□ -1.66
HAA1	YPR008W	MSC6	Q08818	692 aa	Known RBP	4.71	□□□□□ -1.66
HAA1	YPR008W	GLT1	Q12680	2145 aa	Known RBP	4.7	□□□□□ -1.66
HAA1	YPR008W	IPL1	P38991	367 aa		4.7	□□□□□ -1.66
HAA1	YPR008W	KIP3	P53086	805 aa	Known RBP	4.7	□□□□□ -1.66
HAA1	YPR008W	HTS1	P07263	546 aa	Known RBP	4.69	□□□□□ -1.66
HAA1	YPR008W	PHO4	P07270	312 aa	Known RBP	4.69	□□□□□ -1.66
HAA1	YPR008W	RSC6	P25632	483 aa		4.69	□□□□□ -1.66
HAA1	YPR008W	MAE1	P36013	669 aa	Known RBP	4.69	□□□□□ -1.66
HAA1	YPR008W	NOC3	Q07896	663 aa	Predicted RBP	4.69	□□□□□ -1.66
HAA1	YPR008W	SBP1	P10080	294 aa	Known RBP	4.69	□□□□□ -1.66
HAA1	YPR008W	UGA4	P32837	571 aa		4.69	□□□□□ -1.66
HAA1	YPR008W	ECM2	P38241	364 aa	Known RBP	4.68	□□□□□ -1.66
HAA1	YPR008W	PPX1	P38698	397 aa		4.68	□□□□□ -1.66
HAA1	YPR008W	AKR1	P39010	764 aa		4.68	□□□□□ -1.66
HAA1	YPR008W	SGS1	P35187	1447 aa		4.68	□□□□□ -1.66
HAA1	YPR008W	YAF9	P53930	226 aa		4.68	□□□□□ -1.66
HAA1	YPR008W	YLR122C	Q12312	125 aa		4.68	□□□□□ -1.66
HAA1	YPR008W	TRP3	P00937	484 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-DR6	P0CX70	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-ER1	P0CX71	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-LR2	P0CX72	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-PL	P0CX73	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-JR1	P0CX74	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-LR3	P0CX75	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-ML2	P0CX76	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	STM1	P39015	273 aa	Known RBP	4.67	□□□□□ -1.66
HAA1	YPR008W	DAK2	P43550	591 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	ALO1	P54783	526 aa	Known RBP	4.67	□□□□□ -1.66
HAA1	YPR008W	YIG1	Q08956	461 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-GR1	Q12085	440 aa		4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.67	□□□□□ -1.66
HAA1	YPR008W	TY1A-OL	Q92392	440 aa	Known RBP	4.67	□□□□□ -1.66
HAA1	YPR008W	SAM37	P50110	327 aa		4.66	□□□□□ -1.66
HAA1	YPR008W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms