RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	DRS2	P39524	1355 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	YML133C	Q03099	1374 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	YLL067C	Q07888	1374 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	YLL066C	Q99208	1374 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	CLB4	P24871	460 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	NUP120	P35729	1037 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	LSG1	P53145	640 aa	Known RBP	7.86	□□□□□ -1.15
MSB3	YNL293W	BUD7	Q08754	746 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	KEX1	P09620	729 aa		7.85	□□□□□ -1.15
MSB3	YNL293W	YJR008W	P47085	338 aa		7.85	□□□□□ -1.15
MSB3	YNL293W	YGL081W	P53156	320 aa		7.85	□□□□□ -1.15
MSB3	YNL293W	OMS1	Q06668	471 aa		7.85	□□□□□ -1.15
MSB3	YNL293W	YIG1	Q08956	461 aa		7.85	□□□□□ -1.15
MSB3	YNL293W	ESP1	Q03018	1630 aa		7.85	□□□□□ -1.15
MSB3	YNL293W	RAV1	P47104	1357 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	PHO84	P25297	587 aa	Known RBP	7.84	□□□□□ -1.15
MSB3	YNL293W	TFC3	P34111	1160 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	NUP60	P39705	539 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	SYG1	P40528	902 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	NPA3	P47122	385 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	CWH41	P53008	833 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	SDA1	P53313	767 aa	Known RBP	7.84	□□□□□ -1.15
MSB3	YNL293W	COG4	Q06096	861 aa		7.84	□□□□□ -1.15
MSB3	YNL293W	JIP5	Q06214	492 aa	Predicted RBP	7.84	□□□□□ -1.15
MSB3	YNL293W	PAP1	P29468	568 aa	Known RBP	7.84	□□□□□ -1.16
MSB3	YNL293W	SPT8	P38915	602 aa		7.84	□□□□□ -1.16
MSB3	YNL293W	ILM1	P47155	203 aa		7.84	□□□□□ -1.16
MSB3	YNL293W	ENP2	P48234	707 aa	Known RBP	7.84	□□□□□ -1.16
MSB3	YNL293W	NOP15	P53927	220 aa	Predicted RBP	7.84	□□□□□ -1.16
MSB3	YNL293W	BET4	Q00618	327 aa		7.84	□□□□□ -1.16
MSB3	YNL293W	YDL073W	Q07454	984 aa		7.84	□□□□□ -1.16
MSB3	YNL293W	CLP1	Q08685	445 aa	Predicted RBP	7.84	□□□□□ -1.16
MSB3	YNL293W	ATG9	Q12142	997 aa		7.84	□□□□□ -1.16
MSB3	YNL293W	APC11	Q12157	165 aa		7.84	□□□□□ -1.16
MSB3	YNL293W	NAT1	P12945	854 aa	Known RBP	7.83	□□□□□ -1.16
MSB3	YNL293W	GAL11	P19659	1081 aa		7.83	□□□□□ -1.16
MSB3	YNL293W	DLD1	P32891	587 aa		7.83	□□□□□ -1.16
MSB3	YNL293W	SMY2	P32909	740 aa	Known RBP	7.83	□□□□□ -1.16
MSB3	YNL293W	NIP100	P33420	868 aa		7.83	□□□□□ -1.16
MSB3	YNL293W	POL32	P47110	350 aa		7.83	□□□□□ -1.16
MSB3	YNL293W	ESF2	P53743	316 aa	Known RBP	7.83	□□□□□ -1.16
MSB3	YNL293W	ELA1	P53861	379 aa	Predicted RBP	7.83	□□□□□ -1.16
MSB3	YNL293W	SRC1	Q03707	834 aa		7.83	□□□□□ -1.16
MSB3	YNL293W	ARR2	Q06597	130 aa		7.83	□□□□□ -1.16
MSB3	YNL293W	PRP16	P15938	1071 aa	Predicted RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	TUP1	P16649	713 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.82	□□□□□ -1.16	not detected
MSB3	YNL293W	HXT5	P38695	592 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	RPL17B	P46990	184 aa	Known RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	OCA1	P50946	238 aa	Predicted RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	SEC5	P89102	971 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	SSL2	Q00578	843 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	FAR8	Q05040	523 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	SLK19	Q08581	821 aa	Known RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	GEA2	P39993	1459 aa	Known RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	SSK22	P25390	1331 aa	Predicted RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	ADH4	P10127	382 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	PET122	P10355	254 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	SPE2	P21182	396 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	ACP1	P32463	125 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	DID4	P36108	232 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	SAK1	P38990	1142 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	GCN20	P43535	752 aa	Known RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	COP1	P53622	1201 aa	Known RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	YKU80	Q04437	629 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	EIS1	Q05050	843 aa	Known RBP	7.82	□□□□□ -1.16
MSB3	YNL293W	PMT7	Q06644	662 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	GNT1	Q12096	491 aa		7.82	□□□□□ -1.16
MSB3	YNL293W	SES1	P07284	462 aa	Known RBP	7.81	□□□□□ -1.16
MSB3	YNL293W	SEN2	P16658	377 aa		7.81	□□□□□ -1.16
MSB3	YNL293W	HYR1	P40581	163 aa	Known RBP	7.81	□□□□□ -1.16
MSB3	YNL293W	BFA1	P47113	574 aa		7.81	□□□□□ -1.16
MSB3	YNL293W	ECL1	P48235	211 aa		7.81	□□□□□ -1.16
MSB3	YNL293W	HRQ1	Q05549	1077 aa		7.81	□□□□□ -1.16
MSB3	YNL293W	DPL1	Q05567	589 aa		7.81	□□□□□ -1.16
MSB3	YNL293W	GCD2	P12754	651 aa	Predicted RBP	7.8	□□□□□ -1.16
MSB3	YNL293W	HSP78	P33416	811 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	SSF1	P38789	453 aa	Predicted RBP	7.8	□□□□□ -1.16
MSB3	YNL293W	ATG3	P40344	310 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	SHE10	P53075	577 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	FAR11	P53917	953 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	DMA2	P53924	522 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	MFM1	Q02783	413 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	RIO1	Q12196	484 aa	Known RBP	7.8	□□□□□ -1.16
MSB3	YNL293W	PMR1	P13586	950 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	RPC19	P28000	142 aa	Known RBP	7.8	□□□□□ -1.16
MSB3	YNL293W	VPS53	P47061	822 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	CTF4	Q01454	927 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	PNG1	Q02890	363 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	TAF8	Q03750	510 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	MGR3	Q04472	501 aa		7.8	□□□□□ -1.16
MSB3	YNL293W	TSR2	Q06672	205 aa	Known RBP	7.8	□□□□□ -1.16
MSB3	YNL293W	STB1	P42845	420 aa		7.79	□□□□□ -1.16
MSB3	YNL293W	IOC3	P43596	787 aa		7.79	□□□□□ -1.16
MSB3	YNL293W	CAF130	P53280	1122 aa	Predicted RBP	7.79	□□□□□ -1.16
MSB3	YNL293W	MPC54	Q08550	464 aa		7.79	□□□□□ -1.16
MSB3	YNL293W	KOG1	P38873	1557 aa		7.79	□□□□□ -1.16
MSB3	YNL293W	SSC1	P0CS90	654 aa	Known RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	STE6	P12866	1290 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	PDB1	P32473	366 aa	Known RBP	7.78	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms