RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C ATG32P40458 529 aa5.51□□□□□ -1.53
PSE1YMR308C RSM25P40496 264 aa5.51□□□□□ -1.53
PSE1YMR308C ENP2P48234 707 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C INP52P50942 1183 aa5.51□□□□□ -1.53
PSE1YMR308C MSN5P52918 1224 aa5.51□□□□□ -1.53
PSE1YMR308C ZDS2P54786 942 aa5.51□□□□□ -1.53
PSE1YMR308C AOS1Q06624 347 aa5.51□□□□□ -1.53
PSE1YMR308C VIP1Q06685 1146 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C SSK22P25390 1331 aaPredicted RBP5.51□□□□□ -1.53
PSE1YMR308C ATE1P16639 503 aa5.51□□□□□ -1.53
PSE1YMR308C MAK11P20484 414 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C EUG1P32474 517 aa5.51□□□□□ -1.53
PSE1YMR308C DOT6P40059 670 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C TMN3P40071 706 aa5.51□□□□□ -1.53
PSE1YMR308C UTP13Q05946 817 aaKnown RBP5.51□□□□□ -1.53
PSE1YMR308C CIR2Q08822 631 aa5.51□□□□□ -1.53
PSE1YMR308C GRX7P38068 203 aa5.5□□□□□ -1.53
PSE1YMR308C HSE1P38753 452 aa5.5□□□□□ -1.53
PSE1YMR308C VID27P40157 782 aa5.5□□□□□ -1.53
PSE1YMR308C YRB1P41920 201 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C YDR286CQ05530 114 aa5.5□□□□□ -1.53
PSE1YMR308C ATG38Q05789 226 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C GIC2Q06648 383 aa5.5□□□□□ -1.53
PSE1YMR308C MCD1Q12158 566 aa5.5□□□□□ -1.53
PSE1YMR308C YAH1Q12184 172 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C DPS1P04802 557 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C PMS1P14242 873 aa5.5□□□□□ -1.53
PSE1YMR308C PDI1P17967 522 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C PAP1P29468 568 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C YBL028CP38202 106 aa5.5□□□□□ -1.53
PSE1YMR308C OLA1P38219 394 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C FTR1P40088 404 aa5.5□□□□□ -1.53
PSE1YMR308C ITT1Q04638 464 aa5.5□□□□□ -1.53
PSE1YMR308C ERB1Q04660 807 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C MAG2Q06436 670 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C OCA4P25366 362 aa5.5□□□□□ -1.53
PSE1YMR308C PRS1P32895 427 aaKnown RBP5.5□□□□□ -1.53
PSE1YMR308C MET18P40469 1032 aa5.5□□□□□ -1.53
PSE1YMR308C PXA1P41909 870 aa5.5□□□□□ -1.53
PSE1YMR308C YOR352WQ08816 343 aa5.5□□□□□ -1.53
PSE1YMR308C RRI2Q12348 645 aa5.5□□□□□ -1.53
PSE1YMR308C DAL80P26343 269 aa5.49□□□□□ -1.53
PSE1YMR308C SFA1P32771 386 aa5.49□□□□□ -1.53
PSE1YMR308C HSM3P38348 480 aa5.49□□□□□ -1.53
PSE1YMR308C PEX18P38855 283 aa5.49□□□□□ -1.53
PSE1YMR308C CAJ1P39101 391 aa5.49□□□□□ -1.53
PSE1YMR308C IES5P40060 125 aa5.49□□□□□ -1.53
PSE1YMR308C SPR3P41901 512 aa5.49□□□□□ -1.53
PSE1YMR308C IOC3P43596 787 aa5.49□□□□□ -1.53
PSE1YMR308C YIG1Q08956 461 aa5.49□□□□□ -1.53
PSE1YMR308C VPH1P32563 840 aaKnown RBP5.49□□□□□ -1.53
PSE1YMR308C ATG1P53104 897 aa5.49□□□□□ -1.53
PSE1YMR308C KAR5Q04746 504 aa5.49□□□□□ -1.53
PSE1YMR308C GNT1Q12096 491 aa5.49□□□□□ -1.53
PSE1YMR308C YDJ1P25491 409 aaKnown RBP5.49□□□□□ -1.53
PSE1YMR308C MNR2P35724 969 aa5.49□□□□□ -1.53
PSE1YMR308C SLN1P39928 1220 aaPredicted RBP5.49□□□□□ -1.53
PSE1YMR308C IST1P53843 298 aaPredicted RBP5.49□□□□□ -1.53
PSE1YMR308C SVF1Q05515 481 aa5.49□□□□□ -1.53
PSE1YMR308C DIT1P21623 536 aa5.48□□□□□ -1.53
PSE1YMR308C ROX1P25042 368 aa5.48□□□□□ -1.53
PSE1YMR308C HPC2Q01448 625 aa5.48□□□□□ -1.53
PSE1YMR308C NNT1Q05874 261 aa5.48□□□□□ -1.53
PSE1YMR308C CST9Q06032 482 aa5.48□□□□□ -1.53
PSE1YMR308C SPA2P23201 1466 aaKnown RBP5.48□□□□□ -1.53
PSE1YMR308C ACE2P21192 770 aa5.48□□□□□ -1.53
PSE1YMR308C GLC3P32775 704 aa5.48□□□□□ -1.53
PSE1YMR308C PXA2P34230 853 aa5.48□□□□□ -1.53
PSE1YMR308C EFM5P53200 248 aaKnown RBP5.48□□□□□ -1.53
PSE1YMR308C ARO80Q04052 950 aa5.48□□□□□ -1.53
PSE1YMR308C VMS1Q04311 632 aaKnown RBP5.48□□□□□ -1.53
PSE1YMR308C NOB1Q08444 459 aaKnown RBP5.48□□□□□ -1.53
PSE1YMR308C STH1P32597 1359 aa5.48□□□□□ -1.53
PSE1YMR308C SEC8P32855 1065 aa5.47□□□□□ -1.53
PSE1YMR308C YGR021WP53212 290 aa5.47□□□□□ -1.53
PSE1YMR308C ALR1Q08269 859 aa5.47□□□□□ -1.53
PSE1YMR308C IKI3Q06706 1349 aaKnown RBP5.47□□□□□ -1.53
PSE1YMR308C HEM1P09950 548 aaPredicted RBP5.47□□□□□ -1.53
PSE1YMR308C SEN2P16658 377 aa5.47□□□□□ -1.53
PSE1YMR308C PGS1P25578 521 aa5.47□□□□□ -1.53
PSE1YMR308C PLC1P32383 869 aa5.47□□□□□ -1.53
PSE1YMR308C MIA40P36046 403 aa5.47□□□□□ -1.53
PSE1YMR308C CCT3P39077 534 aaKnown RBP5.47□□□□□ -1.53
PSE1YMR308C NDC80P40460 691 aa5.47□□□□□ -1.53
PSE1YMR308C YOR378WQ08902 515 aa5.47□□□□□ -1.53
PSE1YMR308C RIO1Q12196 484 aaKnown RBP5.47□□□□□ -1.53
PSE1YMR308C RED1P14291 827 aa5.47□□□□□ -1.53
PSE1YMR308C YAP1801P38856 637 aa5.47□□□□□ -1.53
PSE1YMR308C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
PSE1YMR308C HAS1Q03532 505 aaKnown RBP5.47□□□□□ -1.53
PSE1YMR308C PGC1Q08959 321 aa5.47□□□□□ -1.53
PSE1YMR308C TRP2P00899 507 aaKnown RBP5.46□□□□□ -1.54
PSE1YMR308C TOM70P07213 617 aaKnown RBP5.46□□□□□ -1.54
PSE1YMR308C PRP22P24384 1145 aaKnown RBP5.46□□□□□ -1.54
PSE1YMR308C CDC60P26637 1090 aaKnown RBP5.46□□□□□ -1.54
PSE1YMR308C ITR1P30605 584 aa5.46□□□□□ -1.54
PSE1YMR308C UGA2P38067 497 aa5.46□□□□□ -1.54
PSE1YMR308C ATG3P40344 310 aa5.46□□□□□ -1.54
PSE1YMR308C IML2P47031 731 aa5.46□□□□□ -1.54
PSE1YMR308C DCP2P53550 970 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms