RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W VAN1P23642 535 aa3.67□□□□□ -1.82
PRP39YML046W YIL165CP40446 119 aa3.67□□□□□ -1.82
PRP39YML046W LEU3P08638 886 aa3.67□□□□□ -1.82
PRP39YML046W LDH1P38139 375 aa3.67□□□□□ -1.82
PRP39YML046W RPL34BP40525 121 aaKnown RBP3.67□□□□□ -1.82
PRP39YML046W ROM1P53046 1155 aa3.67□□□□□ -1.82
PRP39YML046W SPO71Q03868 1245 aa3.67□□□□□ -1.82
PRP39YML046W SOG2Q08817 791 aa3.67□□□□□ -1.82
PRP39YML046W TIF1P10081 395 aaKnown RBP3.66□□□□□ -1.82
PRP39YML046W BIO5P53744 561 aaKnown RBP3.66□□□□□ -1.82
PRP39YML046W YNR065CP53751 1116 aa3.66□□□□□ -1.82
PRP39YML046W FOX2Q02207 900 aaKnown RBP3.66□□□□□ -1.82
PRP39YML046W HSP78P33416 811 aa3.65□□□□□ -1.82
PRP39YML046W TSA1P34760 196 aaKnown RBP3.65□□□□□ -1.82
PRP39YML046W MMM1P41800 426 aa3.65□□□□□ -1.82
PRP39YML046W KIP3P53086 805 aaKnown RBP3.65□□□□□ -1.82
PRP39YML046W TRS33Q99394 268 aa3.65□□□□□ -1.82
PRP39YML046W ERS1P17261 260 aa3.64□□□□□ -1.83
PRP39YML046W TFA2P36145 328 aa3.64□□□□□ -1.83
PRP39YML046W CIT3P43635 486 aa3.64□□□□□ -1.83
PRP39YML046W HDA2Q06629 674 aa3.64□□□□□ -1.83
PRP39YML046W ATG32P40458 529 aa3.64□□□□□ -1.83
PRP39YML046W ALD3P54114 506 aa3.64□□□□□ -1.83
PRP39YML046W WHI3P34761 661 aaKnown RBP3.63□□□□□ -1.83
PRP39YML046W THI80P35202 319 aa3.63□□□□□ -1.83
PRP39YML046W BIM1P40013 344 aa3.63□□□□□ -1.83
PRP39YML046W FLR1P38124 548 aa3.62□□□□□ -1.83
PRP39YML046W NEO1P40527 1151 aa3.62□□□□□ -1.83
PRP39YML046W FUS1P11710 512 aa3.62□□□□□ -1.83
PRP39YML046W GAL2P13181 574 aa3.62□□□□□ -1.83
PRP39YML046W SUV3P32580 737 aa3.61□□□□□ -1.83
PRP39YML046W YOR059CQ08448 450 aaKnown RBP3.61□□□□□ -1.83
PRP39YML046W MSN1P22148 382 aa3.6□□□□□ -1.83
PRP39YML046W BOI1P38041 980 aaKnown RBP3.6□□□□□ -1.83
PRP39YML046W YBR287WP38355 427 aa3.6□□□□□ -1.83
PRP39YML046W FAR11P53917 953 aa3.6□□□□□ -1.83
PRP39YML046W MSH6Q03834 1242 aa3.6□□□□□ -1.83
PRP39YML046W EMG1Q06287 252 aaKnown RBP3.6□□□□□ -1.83
PRP39YML046W PRP6P19735 899 aaPredicted RBP3.6□□□□□ -1.83
PRP39YML046W RCM1P53972 490 aa3.6□□□□□ -1.83
PRP39YML046W SIS2P36024 562 aa3.59□□□□□ -1.83
PRP39YML046W YOR223WQ12015 292 aa3.59□□□□□ -1.83
PRP39YML046W YBR197CP38306 217 aa3.58□□□□□ -1.84
PRP39YML046W AIM46P38885 310 aa3.58□□□□□ -1.84
PRP39YML046W GPT2P36148 743 aa3.57□□□□□ -1.84
PRP39YML046W FIR1P40020 876 aa3.57□□□□□ -1.84
PRP39YML046W OYE3P41816 400 aaPredicted RBP3.57□□□□□ -1.84
PRP39YML046W HAS1Q03532 505 aaKnown RBP3.57□□□□□ -1.84
PRP39YML046W GSF2Q04697 403 aaKnown RBP3.57□□□□□ -1.84
PRP39YML046W YMR074CQ04773 145 aa3.57□□□□□ -1.84
PRP39YML046W ADP1P25371 1049 aa3.56□□□□□ -1.84
PRP39YML046W YJR124CP47159 448 aa3.56□□□□□ -1.84
PRP39YML046W ISC10P32645 267 aa3.56□□□□□ -1.84
PRP39YML046W TAD3Q9URQ3 322 aa3.56□□□□□ -1.84
PRP39YML046W AIM3P38266 947 aaKnown RBP3.55□□□□□ -1.84
PRP39YML046W ORC3P54790 616 aa3.55□□□□□ -1.84
PRP39YML046W NFS1P25374 497 aa3.54□□□□□ -1.84
PRP39YML046W FET4P40988 552 aa3.54□□□□□ -1.84
PRP39YML046W DOT1Q04089 582 aaKnown RBP3.54□□□□□ -1.84
PRP39YML046W HVG1P0CE11 249 aa3.53□□□□□ -1.84
PRP39YML046W HXT8P40886 569 aa3.52□□□□□ -1.85
PRP39YML046W ALD4P46367 519 aaKnown RBP3.52□□□□□ -1.85
PRP39YML046W RIM8P53179 542 aa3.52□□□□□ -1.85
PRP39YML046W YLL054CQ12244 843 aa3.52□□□□□ -1.85
PRP39YML046W ECM23Q02710 187 aa3.52□□□□□ -1.85
PRP39YML046W SSY1Q03770 852 aa3.52□□□□□ -1.85
PRP39YML046W GLO4Q12320 285 aa3.52□□□□□ -1.85
PRP39YML046W TRE1Q08919 783 aa3.51□□□□□ -1.85
PRP39YML046W RPS4AP0CX35 261 aaKnown RBP3.5□□□□□ -1.85
PRP39YML046W RPS4BP0CX36 261 aaKnown RBP3.5□□□□□ -1.85
PRP39YML046W TGL4P36165 910 aa3.5□□□□□ -1.85
PRP39YML046W MRPL22P53881 309 aa3.5□□□□□ -1.85
PRP39YML046W ABZ1P37254 787 aaPredicted RBP3.5□□□□□ -1.85
PRP39YML046W UBX7P38349 436 aa3.5□□□□□ -1.85
PRP39YML046W RGD2P43556 714 aa3.5□□□□□ -1.85
PRP39YML046W HGH1P48362 394 aaKnown RBP3.5□□□□□ -1.85
PRP39YML046W LPX1Q12405 387 aaKnown RBP3.5□□□□□ -1.85
PRP39YML046W PRO1P32264 428 aa3.49□□□□□ -1.85
PRP39YML046W TOD6P34219 525 aa3.48□□□□□ -1.85
PRP39YML046W YPT53P36019 220 aa3.48□□□□□ -1.85
PRP39YML046W NTA1P40354 457 aa3.47□□□□□ -1.85
PRP39YML046W GCV1P48015 400 aa3.47□□□□□ -1.85
PRP39YML046W SOD2P00447 233 aa3.47□□□□□ -1.85
PRP39YML046W TUB2P02557 457 aaKnown RBP3.47□□□□□ -1.85
PRP39YML046W ALT1P52893 592 aa3.47□□□□□ -1.85
PRP39YML046W YDL177CQ12257 170 aa3.47□□□□□ -1.85
PRP39YML046W PNS1Q12412 539 aa3.47□□□□□ -1.85
PRP39YML046W PEX7P39108 375 aa3.46□□□□□ -1.86
PRP39YML046W PUN1Q06991 263 aa3.46□□□□□ -1.86
PRP39YML046W PYC2P32327 1180 aaKnown RBP3.45□□□□□ -1.86
PRP39YML046W RAD55P38953 406 aa3.45□□□□□ -1.86
PRP39YML046W MSH4P40965 878 aaPredicted RBP3.45□□□□□ -1.86
PRP39YML046W SUT1P53032 299 aaKnown RBP3.45□□□□□ -1.86
PRP39YML046W YVC1Q12324 675 aa3.45□□□□□ -1.86
PRP39YML046W TIF6Q12522 245 aaKnown RBP3.45□□□□□ -1.86
PRP39YML046W PTC7P38797 343 aa3.45□□□□□ -1.86
PRP39YML046W EAR1Q03212 550 aa3.45□□□□□ -1.86
PRP39YML046W CLU1Q03690 1277 aaKnown RBP3.44□□□□□ -1.86
PRP39YML046W PUF6Q04373 656 aaKnown RBP3.44□□□□□ -1.86
PRP39YML046W YIG1Q08956 461 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms