RNA–Protein interactions for RNA: YKL143W

LTV1, Transcript of Component of the GSE complex, yeast

Gene LTV1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LTV1	YKL143W	MCA1	Q08601	432 aa		5.82	□□□□□ -1.48
LTV1	YKL143W	IML1	P47170	1584 aa		5.82	□□□□□ -1.48
LTV1	YKL143W	NUP188	P52593	1655 aa	Known RBP	5.82	□□□□□ -1.48
LTV1	YKL143W	SSA1	P10591	642 aa	Known RBP	5.81	□□□□□ -1.48
LTV1	YKL143W	HAL5	P38970	855 aa	Known RBP	5.81	□□□□□ -1.48
LTV1	YKL143W	VMR1	P38735	1592 aa		5.81	□□□□□ -1.48
LTV1	YKL143W	KNS1	P32350	737 aa	Predicted RBP	5.8	□□□□□ -1.48
LTV1	YKL143W	YML083C	Q04526	418 aa		5.8	□□□□□ -1.48
LTV1	YKL143W	STB3	Q12427	513 aa		5.8	□□□□□ -1.48
LTV1	YKL143W	PDC5	P16467	563 aa	Known RBP	5.8	□□□□□ -1.48
LTV1	YKL143W	MAC1	P35192	417 aa		5.8	□□□□□ -1.48
LTV1	YKL143W	SLX8	P40072	274 aa		5.8	□□□□□ -1.48
LTV1	YKL143W	ECM23	Q02710	187 aa		5.8	□□□□□ -1.48
LTV1	YKL143W	URN1	Q06525	465 aa	Known RBP	5.8	□□□□□ -1.48
LTV1	YKL143W	TYS1	P36421	394 aa	Known RBP	5.79	□□□□□ -1.48
LTV1	YKL143W	SHM1	P37292	490 aa	Predicted RBP	5.79	□□□□□ -1.48
LTV1	YKL143W	IPL1	P38991	367 aa		5.79	□□□□□ -1.48
LTV1	YKL143W	BUD21	Q08492	214 aa	Predicted RBP	5.79	□□□□□ -1.48
LTV1	YKL143W	GAL2	P13181	574 aa		5.78	□□□□□ -1.48
LTV1	YKL143W	PDC6	P26263	563 aa	Known RBP	5.78	□□□□□ -1.48
LTV1	YKL143W	HDA3	Q06623	655 aa		5.78	□□□□□ -1.48
LTV1	YKL143W	PSH1	Q12161	406 aa		5.78	□□□□□ -1.48
LTV1	YKL143W	GEF1	P37020	779 aa		5.77	□□□□□ -1.49
LTV1	YKL143W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
LTV1	YKL143W	HAP1	P0CE41	1502 aa		5.76	□□□□□ -1.49
LTV1	YKL143W	PDR5	P33302	1511 aa	Known RBP	5.76	□□□□□ -1.49
LTV1	YKL143W	PHO87	P25360	923 aa		5.76	□□□□□ -1.49
LTV1	YKL143W	SPR3	P41901	512 aa		5.76	□□□□□ -1.49
LTV1	YKL143W	TY1A-DR2	Q03964	440 aa	Known RBP	5.76	□□□□□ -1.49
LTV1	YKL143W	PDI1	P17967	522 aa	Known RBP	5.75	□□□□□ -1.49
LTV1	YKL143W	UBX7	P38349	436 aa		5.75	□□□□□ -1.49
LTV1	YKL143W	PRY1	P47032	299 aa		5.75	□□□□□ -1.49
LTV1	YKL143W	ACS2	P52910	683 aa	Known RBP	5.75	□□□□□ -1.49
LTV1	YKL143W	THI12	P42883	340 aa		5.74	□□□□□ -1.49
LTV1	YKL143W	THI5	P43534	340 aa		5.74	□□□□□ -1.49
LTV1	YKL143W	THI11	P47183	340 aa		5.74	□□□□□ -1.49
LTV1	YKL143W	RPL34A	P87262	121 aa	Predicted RBP	5.74	□□□□□ -1.49
LTV1	YKL143W	THI13	Q07748	340 aa		5.74	□□□□□ -1.49
LTV1	YKL143W	TSC13	Q99190	310 aa		5.74	□□□□□ -1.49
LTV1	YKL143W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.74	□□□□□ -1.49
LTV1	YKL143W	HAP4	P14064	554 aa		5.73	□□□□□ -1.49
LTV1	YKL143W	AIM9	P40053	627 aa	Known RBP	5.73	□□□□□ -1.49
LTV1	YKL143W	YPL034W	Q03083	165 aa		5.73	□□□□□ -1.49
LTV1	YKL143W	RPP1A	P05318	106 aa	Predicted RBP	5.72	□□□□□ -1.49
LTV1	YKL143W	YFL034W	P43564	1073 aa		5.72	□□□□□ -1.49
LTV1	YKL143W	ALO1	P54783	526 aa	Known RBP	5.72	□□□□□ -1.49
LTV1	YKL143W	RPS31	P05759	152 aa	Known RBP	5.71	□□□□□ -1.5
LTV1	YKL143W	ROM1	P53046	1155 aa		5.71	□□□□□ -1.5
LTV1	YKL143W	SSM4	P40318	1319 aa		5.71	□□□□□ -1.5
LTV1	YKL143W	PDR11	P40550	1411 aa		5.71	□□□□□ -1.5
LTV1	YKL143W	GAS4	Q08271	471 aa		5.7	□□□□□ -1.5
LTV1	YKL143W	IKI3	Q06706	1349 aa	Known RBP	5.7	□□□□□ -1.5
LTV1	YKL143W	NTH2	P35172	780 aa		5.69	□□□□□ -1.5
LTV1	YKL143W	LEU1	P07264	779 aa	Known RBP	5.68	□□□□□ -1.5
LTV1	YKL143W	OMA1	P36163	345 aa		5.68	□□□□□ -1.5
LTV1	YKL143W	SWI5	P08153	709 aa		5.67	□□□□□ -1.5
LTV1	YKL143W	RPS6A	P0CX37	236 aa	Known RBP	5.67	□□□□□ -1.5
LTV1	YKL143W	RPS6B	P0CX38	236 aa	Predicted RBP	5.67	□□□□□ -1.5
LTV1	YKL143W	TPS3	P38426	1054 aa	Known RBP	5.67	□□□□□ -1.5
LTV1	YKL143W	YPQ2	Q06328	317 aa		5.67	□□□□□ -1.5
LTV1	YKL143W	CDC3	P32457	520 aa	Known RBP	5.67	□□□□□ -1.5
LTV1	YKL143W	YTA6	P40328	754 aa		5.67	□□□□□ -1.5
LTV1	YKL143W	NHA1	Q99271	985 aa		5.67	□□□□□ -1.5
LTV1	YKL143W	GCN2	P15442	1659 aa		5.66	□□□□□ -1.5
LTV1	YKL143W	VAN1	P23642	535 aa		5.66	□□□□□ -1.5
LTV1	YKL143W	MSC7	P38694	644 aa		5.66	□□□□□ -1.5
LTV1	YKL143W	IRC24	P40580	263 aa		5.66	□□□□□ -1.5
LTV1	YKL143W	PUF6	Q04373	656 aa	Known RBP	5.66	□□□□□ -1.5
LTV1	YKL143W	CYT1	P07143	309 aa		5.65	□□□□□ -1.51
LTV1	YKL143W	RGP1	P16664	663 aa		5.65	□□□□□ -1.51
LTV1	YKL143W	KRE5	P22023	1365 aa		5.64	□□□□□ -1.51
LTV1	YKL143W	ALG14	P38242	237 aa		5.64	□□□□□ -1.51
LTV1	YKL143W	ALD2	P47771	506 aa		5.64	□□□□□ -1.51
LTV1	YKL143W	CWC15	Q03772	175 aa	Known RBP	5.64	□□□□□ -1.51
LTV1	YKL143W	UBP1	P25037	809 aa		5.63	□□□□□ -1.51
LTV1	YKL143W	PGM2	P37012	569 aa	Known RBP	5.63	□□□□□ -1.51
LTV1	YKL143W	BUD9	P53226	547 aa		5.63	□□□□□ -1.51
LTV1	YKL143W	PUN1	Q06991	263 aa		5.63	□□□□□ -1.51
LTV1	YKL143W	TRS33	Q99394	268 aa		5.63	□□□□□ -1.51
LTV1	YKL143W	INP52	P50942	1183 aa		5.62	□□□□□ -1.51
LTV1	YKL143W	YNL165W	P53891	406 aa		5.62	□□□□□ -1.51
LTV1	YKL143W	CFT1	Q06632	1357 aa	Known RBP	5.61	□□□□□ -1.51
LTV1	YKL143W	HEH2	Q03281	663 aa		5.61	□□□□□ -1.51
LTV1	YKL143W	SRS2	P12954	1174 aa		5.6	□□□□□ -1.51
LTV1	YKL143W	SUV3	P32580	737 aa		5.6	□□□□□ -1.51
LTV1	YKL143W	NGR1	P32831	672 aa	Known RBP	5.6	□□□□□ -1.51
LTV1	YKL143W	CWH41	P53008	833 aa		5.6	□□□□□ -1.51
LTV1	YKL143W	RIA1	P53893	1110 aa		5.6	□□□□□ -1.51
LTV1	YKL143W	PNP1	Q05788	311 aa		5.6	□□□□□ -1.51
LTV1	YKL143W	HAT1	Q12341	374 aa		5.6	□□□□□ -1.51
LTV1	YKL143W	MCM1	P11746	286 aa		5.59	□□□□□ -1.51
LTV1	YKL143W	ALD4	P46367	519 aa	Known RBP	5.59	□□□□□ -1.51
LTV1	YKL143W	YML020W	Q03722	664 aa		5.59	□□□□□ -1.51
LTV1	YKL143W	Q0182	Q9ZZW1	134 aa		5.59	□□□□□ -1.51
LTV1	YKL143W	NUP192	P47054	1683 aa		5.59	□□□□□ -1.51
LTV1	YKL143W	BCK1	Q01389	1478 aa		5.59	□□□□□ -1.52
LTV1	YKL143W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
LTV1	YKL143W	YNR029C	P53729	429 aa	Known RBP	5.58	□□□□□ -1.52
LTV1	YKL143W	MLF3	P32047	452 aa		5.57	□□□□□ -1.52
LTV1	YKL143W	KAR5	Q04746	504 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms