RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W ATG14P38270 344 aa7.47□□□□□ -1.21
NMD5YJR132W FTR1P40088 404 aa7.47□□□□□ -1.21
NMD5YJR132W MAG2Q06436 670 aaKnown RBP7.47□□□□□ -1.21
NMD5YJR132W MSN5P52918 1224 aa7.47□□□□□ -1.21
NMD5YJR132W YDR286CQ05530 114 aa7.47□□□□□ -1.21
NMD5YJR132W PGS1P25578 521 aa7.46□□□□□ -1.21
NMD5YJR132W TPD3P31383 635 aa7.46□□□□□ -1.21
NMD5YJR132W GLC3P32775 704 aa7.46□□□□□ -1.21
NMD5YJR132W YEL1P34225 687 aa7.46□□□□□ -1.21
NMD5YJR132W PEX18P38855 283 aa7.46□□□□□ -1.21
NMD5YJR132W IPL1P38991 367 aa7.46□□□□□ -1.21
NMD5YJR132W SHE4P51534 789 aa7.46□□□□□ -1.21
NMD5YJR132W YGR021WP53212 290 aa7.46□□□□□ -1.21
NMD5YJR132W UTP13Q05946 817 aaKnown RBP7.46□□□□□ -1.21
NMD5YJR132W YLR352WQ06479 807 aa7.46□□□□□ -1.21
NMD5YJR132W APL2P36000 726 aaPredicted RBP7.46□□□□□ -1.22
NMD5YJR132W SET2P46995 733 aaKnown RBP7.46□□□□□ -1.22
NMD5YJR132W MEF1P25039 761 aa7.45□□□□□ -1.22
NMD5YJR132W ALG2P43636 503 aa7.45□□□□□ -1.22
NMD5YJR132W YMR1P47147 688 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
NMD5YJR132W YJR142WP47173 342 aa7.45□□□□□ -1.22
NMD5YJR132W ALF1P53904 254 aa7.45□□□□□ -1.22
NMD5YJR132W AOS1Q06624 347 aa7.45□□□□□ -1.22
NMD5YJR132W GIC2Q06648 383 aa7.45□□□□□ -1.22
NMD5YJR132W ATE1P16639 503 aa7.45□□□□□ -1.22
NMD5YJR132W DIT1P21623 536 aa7.45□□□□□ -1.22
NMD5YJR132W SUM1P46676 1062 aa7.45□□□□□ -1.22
NMD5YJR132W MSB4Q12317 492 aa7.45□□□□□ -1.22
NMD5YJR132W SPS1P08458 490 aa7.45□□□□□ -1.22
NMD5YJR132W ERC1P38767 581 aa7.45□□□□□ -1.22
NMD5YJR132W CCT3P39077 534 aaKnown RBP7.45□□□□□ -1.22
NMD5YJR132W TMN3P40071 706 aa7.45□□□□□ -1.22
NMD5YJR132W EFM5P53200 248 aaKnown RBP7.45□□□□□ -1.22
NMD5YJR132W ADE12P80210 433 aaKnown RBP7.45□□□□□ -1.22
NMD5YJR132W ATG16Q03818 150 aa7.45□□□□□ -1.22
NMD5YJR132W AIM7Q12156 149 aa7.45□□□□□ -1.22
NMD5YJR132W DAL80P26343 269 aa7.44□□□□□ -1.22
NMD5YJR132W YGR153WP48238 217 aa7.44□□□□□ -1.22
NMD5YJR132W LAP3Q01532 483 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
NMD5YJR132W CWC21Q03375 135 aaKnown RBP7.44□□□□□ -1.22
NMD5YJR132W MDM36Q06820 579 aa7.44□□□□□ -1.22
NMD5YJR132W YOR378WQ08902 515 aa7.44□□□□□ -1.22
NMD5YJR132W CDC60P26637 1090 aaKnown RBP7.44□□□□□ -1.22
NMD5YJR132W SHC1P39000 512 aa7.44□□□□□ -1.22
NMD5YJR132W SNF7P39929 240 aaKnown RBP7.44□□□□□ -1.22
NMD5YJR132W ERB1Q04660 807 aaKnown RBP7.44□□□□□ -1.22
NMD5YJR132W ESF1Q06344 628 aaKnown RBP7.44□□□□□ -1.22
NMD5YJR132W ALR1Q08269 859 aa7.44□□□□□ -1.22
NMD5YJR132W MCD1Q12158 566 aa7.44□□□□□ -1.22
NMD5YJR132W PRT1P06103 763 aaKnown RBP7.43□□□□□ -1.22
NMD5YJR132W GGA2P38817 585 aaKnown RBP7.43□□□□□ -1.22
NMD5YJR132W SRB7P47822 140 aa7.43□□□□□ -1.22
NMD5YJR132W NUP42P49686 430 aaKnown RBP7.43□□□□□ -1.22
NMD5YJR132W RRN11Q04712 507 aa7.43□□□□□ -1.22
NMD5YJR132W INH1P01097 85 aa7.43□□□□□ -1.22
NMD5YJR132W PEX6P33760 1030 aa7.43□□□□□ -1.22
NMD5YJR132W HSM3P38348 480 aa7.43□□□□□ -1.22
NMD5YJR132W IES5P40060 125 aa7.43□□□□□ -1.22
NMD5YJR132W MET18P40469 1032 aa7.43□□□□□ -1.22
NMD5YJR132W SHE10P53075 577 aa7.43□□□□□ -1.22
NMD5YJR132W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22 RIP-Chip
NMD5YJR132W PEX19Q07418 342 aa7.43□□□□□ -1.22
NMD5YJR132W SRP40P32583 406 aaPredicted RBP7.43□□□□□ -1.22
NMD5YJR132W YBL028CP38202 106 aa7.43□□□□□ -1.22
NMD5YJR132W SSZ1P38788 538 aaKnown RBP7.43□□□□□ -1.22
NMD5YJR132W RAD3P06839 778 aa7.42□□□□□ -1.22
NMD5YJR132W EUG1P32474 517 aa7.42□□□□□ -1.22
NMD5YJR132W RIM21P48565 533 aa7.42□□□□□ -1.22
NMD5YJR132W ATP22P50273 684 aaPredicted RBP7.42□□□□□ -1.22
NMD5YJR132W HAT1Q12341 374 aa7.42□□□□□ -1.22
NMD5YJR132W RTP1Q12751 981 aa7.42□□□□□ -1.22
NMD5YJR132W PTR2P32901 601 aa7.42□□□□□ -1.22
NMD5YJR132W YEN1P40028 759 aa7.42□□□□□ -1.22
NMD5YJR132W RPL34AP87262 121 aaPredicted RBP7.42□□□□□ -1.22
NMD5YJR132W TFB3Q03290 321 aa7.42□□□□□ -1.22
NMD5YJR132W YMR111CQ04461 462 aaPredicted RBP7.42□□□□□ -1.22
NMD5YJR132W PAP1P29468 568 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W SFA1P32771 386 aa7.41□□□□□ -1.22
NMD5YJR132W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
NMD5YJR132W APD1P38281 316 aa7.41□□□□□ -1.22
NMD5YJR132W MPH1P40562 993 aa7.41□□□□□ -1.22
NMD5YJR132W SPO1P53541 631 aa7.41□□□□□ -1.22
NMD5YJR132W RTC1Q08281 1341 aa7.41□□□□□ -1.22
NMD5YJR132W RED1P14291 827 aa7.41□□□□□ -1.22
NMD5YJR132W YKL091CP33324 310 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W TOM71P38825 639 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W PGC1Q08959 321 aa7.41□□□□□ -1.22
NMD5YJR132W RIO1Q12196 484 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W GAL1P04385 528 aa7.41□□□□□ -1.22
NMD5YJR132W RPB2P08518 1224 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W PSE1P32337 1089 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W VTC2P43585 828 aa7.41□□□□□ -1.22
NMD5YJR132W ERO1Q03103 563 aa7.41□□□□□ -1.22
NMD5YJR132W NNT1Q05874 261 aa7.41□□□□□ -1.22
NMD5YJR132W NOB1Q08444 459 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W SLK19Q08581 821 aaKnown RBP7.41□□□□□ -1.22
NMD5YJR132W HEM1P09950 548 aaPredicted RBP7.4□□□□□ -1.22
NMD5YJR132W SEC8P32855 1065 aa7.4□□□□□ -1.22
NMD5YJR132W DAK2P43550 591 aa7.4□□□□□ -1.22
NMD5YJR132W IKI3Q06706 1349 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms