RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	CWH41	P53008	833 aa		4.55	□□□□□ -1.68
YPS6	YIR039C	NUT2	Q06213	157 aa		4.55	□□□□□ -1.68
YPS6	YIR039C	FRT1	Q99332	602 aa		4.55	□□□□□ -1.68
YPS6	YIR039C	MET1	P36150	593 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	AMN1	P38285	549 aa	Predicted RBP	4.54	□□□□□ -1.68
YPS6	YIR039C	GLO3	P38682	493 aa	Known RBP	4.54	□□□□□ -1.68
YPS6	YIR039C	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
YPS6	YIR039C	ALD4	P46367	519 aa	Known RBP	4.54	□□□□□ -1.68
YPS6	YIR039C	SVF1	Q05515	481 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	STB3	Q12427	513 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	TRS33	Q99394	268 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	SPP41	P38904	1435 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	MLP2	P40457	1679 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	UBP1	P25037	809 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	SUV3	P32580	737 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	OCA5	P38738	679 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	THI12	P42883	340 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	THI5	P43534	340 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	JJJ2	P46997	583 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	THI11	P47183	340 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	THI13	Q07748	340 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	MCA1	Q08601	432 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	LSO1	Q3E827	93 aa		4.54	□□□□□ -1.68
YPS6	YIR039C	CDC25	P04821	1589 aa		4.53	□□□□□ -1.68
YPS6	YIR039C	TRM732	Q03496	1420 aa		4.53	□□□□□ -1.68
YPS6	YIR039C	IRE1	P32361	1115 aa		4.53	□□□□□ -1.68
YPS6	YIR039C	PDR15	Q04182	1529 aa	Known RBP	4.52	□□□□□ -1.69
YPS6	YIR039C	MET4	P32389	672 aa		4.52	□□□□□ -1.69
YPS6	YIR039C	NGR1	P32831	672 aa	Known RBP	4.52	□□□□□ -1.69
YPS6	YIR039C	LSB6	P42951	607 aa		4.52	□□□□□ -1.69
YPS6	YIR039C	YJR107W	P47145	328 aa		4.52	□□□□□ -1.69
YPS6	YIR039C	YPQ2	Q06328	317 aa		4.52	□□□□□ -1.69
YPS6	YIR039C	KNS1	P32350	737 aa	Predicted RBP	4.51	□□□□□ -1.69
YPS6	YIR039C	SEC8	P32855	1065 aa		4.51	□□□□□ -1.69
YPS6	YIR039C	MRPL16	P38064	232 aa		4.51	□□□□□ -1.69
YPS6	YIR039C	TAT1	P38085	619 aa		4.51	□□□□□ -1.69
YPS6	YIR039C	OYE2	Q03558	400 aa	Known RBP	4.51	□□□□□ -1.69
YPS6	YIR039C	PAN1	P32521	1480 aa		4.51	□□□□□ -1.69
YPS6	YIR039C	MCM1	P11746	286 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	PDC5	P16467	563 aa	Known RBP	4.5	□□□□□ -1.69
YPS6	YIR039C	BOI1	P38041	980 aa	Known RBP	4.5	□□□□□ -1.69
YPS6	YIR039C	Q0182	Q9ZZW1	134 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	ESC1	Q03661	1658 aa	Known RBP	4.5	□□□□□ -1.69
YPS6	YIR039C	VTH1	P40438	1549 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	VTH2	P40890	1549 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	TSC11	P40061	1430 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	MAC1	P35192	417 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	SHM1	P37292	490 aa	Predicted RBP	4.5	□□□□□ -1.69
YPS6	YIR039C	MGE1	P38523	228 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	IOC4	Q04213	475 aa		4.5	□□□□□ -1.69
YPS6	YIR039C	ULS1	Q08562	1619 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	YTA6	P40328	754 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	SPR3	P41901	512 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	TRS120	Q04183	1289 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	GLT1	Q12680	2145 aa	Known RBP	4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-JR2	P47100	1755 aa	Known RBP	4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-ER2	Q03619	1755 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-MR1	Q04214	1755 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-NL1	Q12112	1755 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-GR1	Q12141	1755 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	TY1B-BL	Q12490	1755 aa		4.49	□□□□□ -1.69
YPS6	YIR039C	GEA1	P47102	1408 aa	Predicted RBP	4.49	□□□□□ -1.69
YPS6	YIR039C	IKI3	Q06706	1349 aa	Known RBP	4.48	□□□□□ -1.69
YPS6	YIR039C	PDC6	P26263	563 aa	Known RBP	4.48	□□□□□ -1.69
YPS6	YIR039C	FOX2	Q02207	900 aa	Known RBP	4.48	□□□□□ -1.69
YPS6	YIR039C	PSH1	Q12161	406 aa		4.48	□□□□□ -1.69
YPS6	YIR039C	MLF3	P32047	452 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	SCD5	P34758	872 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	YBR197C	P38306	217 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	FYV10	P40492	516 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	NNF1	P47149	201 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	YNL165W	P53891	406 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	GPI13	Q07830	1017 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	APC11	Q12157	165 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	DNF1	P32660	1571 aa		4.47	□□□□□ -1.69
YPS6	YIR039C	ISC10	P32645	267 aa		4.46	□□□□□ -1.69
YPS6	YIR039C	PRY1	P47032	299 aa		4.46	□□□□□ -1.69
YPS6	YIR039C	CAB1	Q04430	367 aa		4.46	□□□□□ -1.69
YPS6	YIR039C	MAG2	Q06436	670 aa	Known RBP	4.46	□□□□□ -1.69
YPS6	YIR039C	SSM4	P40318	1319 aa		4.46	□□□□□ -1.7
YPS6	YIR039C	RPA190	P10964	1664 aa	Known RBP	4.46	□□□□□ -1.7
YPS6	YIR039C	PHO4	P07270	312 aa	Known RBP	4.46	□□□□□ -1.7
YPS6	YIR039C	TY1A-DR2	Q03964	440 aa	Known RBP	4.46	□□□□□ -1.7
YPS6	YIR039C	JIP5	Q06214	492 aa	Predicted RBP	4.46	□□□□□ -1.7
YPS6	YIR039C	MNL2	Q12205	849 aa		4.46	□□□□□ -1.7
YPS6	YIR039C	SNT2	P53127	1403 aa		4.45	□□□□□ -1.7
YPS6	YIR039C	RPB10	P22139	70 aa		4.45	□□□□□ -1.7
YPS6	YIR039C	MTO1	P53070	669 aa		4.45	□□□□□ -1.7
YPS6	YIR039C	RPS31	P05759	152 aa	Known RBP	4.44	□□□□□ -1.7
YPS6	YIR039C	KTR2	P33550	425 aa		4.44	□□□□□ -1.7
YPS6	YIR039C	HXT5	P38695	592 aa		4.44	□□□□□ -1.7
YPS6	YIR039C	UFD2	P54860	961 aa		4.44	□□□□□ -1.7
YPS6	YIR039C	FPR4	Q06205	392 aa	Predicted RBP	4.44	□□□□□ -1.7
YPS6	YIR039C	UTP4	Q06679	776 aa	Known RBP	4.44	□□□□□ -1.7
YPS6	YIR039C	TY3B-G	Q99315	1547 aa		4.43	□□□□□ -1.7
YPS6	YIR039C	YPL034W	Q03083	165 aa		4.43	□□□□□ -1.7
YPS6	YIR039C	NTE1	Q04958	1679 aa		4.43	□□□□□ -1.7
YPS6	YIR039C	MCM2	P29469	868 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms