RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C CAF20P12962 161 aaKnown RBP8.83□□□□□ -1
SNP1YIL061C RER2P35196 286 aa8.83□□□□□ -1
SNP1YIL061C UGA2P38067 497 aa8.83□□□□□ -1
SNP1YIL061C MAL33P38157 468 aa8.83□□□□□ -1
SNP1YIL061C CCT5P40413 562 aaKnown RBP8.83□□□□□ -1
SNP1YIL061C RSC1P53236 928 aa8.83□□□□□ -1
SNP1YIL061C UBP10P53874 792 aaPredicted RBP8.83□□□□□ -1
SNP1YIL061C LCD1Q04377 747 aa8.83□□□□□ -1
SNP1YIL061C YPR148CQ06523 435 aa8.83□□□□□ -1
SNP1YIL061C PSF3Q12146 194 aa8.83□□□□□ -1
SNP1YIL061C RDS1P25611 832 aa8.82□□□□□ -1
SNP1YIL061C BOI1P38041 980 aaKnown RBP8.82□□□□□ -1
SNP1YIL061C YFH7P43591 353 aa8.82□□□□□ -1
SNP1YIL061C EST2Q06163 884 aa8.82□□□□□ -1
SNP1YIL061C PMD1P32634 1753 aa8.81□□□□□ -1
SNP1YIL061C MPH3P0CE00 602 aa8.81□□□□□ -1
SNP1YIL061C FRS2P15625 503 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C SMY1P32364 656 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C PTK1P36002 662 aaPredicted RBP8.81□□□□□ -1
SNP1YIL061C RFC5P38251 354 aa8.81□□□□□ -1
SNP1YIL061C ENT3P47160 408 aa8.81□□□□□ -1
SNP1YIL061C ETT1Q08421 412 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C DDP1Q99321 188 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C CHO2P05374 869 aaKnown RBP8.8□□□□□ -1
SNP1YIL061C SNF3P10870 884 aa8.8□□□□□ -1
SNP1YIL061C SIS2P36024 562 aa8.8□□□□□ -1
SNP1YIL061C ERT1P38140 529 aa8.8□□□□□ -1
SNP1YIL061C BUD6P41697 788 aa8.8□□□□□ -1
SNP1YIL061C RPS15Q01855 142 aaKnown RBP8.8□□□□□ -1
SNP1YIL061C FAS2P19097 1887 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C PGI1P12709 554 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C CBP3P21560 335 aa8.79□□□□□ -1
SNP1YIL061C RPT3P33298 428 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C DID4P36108 232 aa8.79□□□□□ -1
SNP1YIL061C RRP8P38961 392 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C UFD2P54860 961 aa8.79□□□□□ -1
SNP1YIL061C WRS1Q12109 432 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C PFK2P16862 959 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
SNP1YIL061C YGL015CP33199 130 aa8.78□□□□□ -1
SNP1YIL061C MYO3P36006 1272 aa8.78□□□□□ -1
SNP1YIL061C RFT1P38206 574 aaPredicted RBP8.78□□□□□ -1
SNP1YIL061C RTS1P38903 757 aa8.78□□□□□ -1
SNP1YIL061C EPL1P43572 832 aa8.78□□□□□ -1
SNP1YIL061C TAF13P11747 167 aa8.77□□□□□ -1.01
SNP1YIL061C DIT2P21595 489 aa8.77□□□□□ -1.01
SNP1YIL061C RET1P22276 1149 aaKnown RBP8.77□□□□□ -1.01
SNP1YIL061C YKL222CP35995 705 aa8.77□□□□□ -1.01
SNP1YIL061C YHL050CP38721 697 aa8.77□□□□□ -1.01
SNP1YIL061C JJJ2P46997 583 aa8.77□□□□□ -1.01
SNP1YIL061C TOS4Q06266 489 aa8.77□□□□□ -1.01
SNP1YIL061C HKR1P41809 1802 aa8.76□□□□□ -1.01
SNP1YIL061C ANP1P32629 500 aa8.76□□□□□ -1.01
SNP1YIL061C MDL2P33311 773 aa8.76□□□□□ -1.01
SNP1YIL061C BMH2P34730 273 aaKnown RBP8.76□□□□□ -1.01
SNP1YIL061C NPR3P38742 1146 aa8.76□□□□□ -1.01
SNP1YIL061C AKR1P39010 764 aa8.76□□□□□ -1.01
SNP1YIL061C SET4P42948 560 aa8.76□□□□□ -1.01
SNP1YIL061C FAR11P53917 953 aa8.76□□□□□ -1.01
SNP1YIL061C HDA1P53973 706 aa8.76□□□□□ -1.01
SNP1YIL061C TFC6Q06339 672 aa8.76□□□□□ -1.01
SNP1YIL061C GRX6Q12438 231 aa8.76□□□□□ -1.01
SNP1YIL061C RPN10P38886 268 aaKnown RBP8.75□□□□□ -1.01
SNP1YIL061C PTK2P47116 818 aaKnown RBP8.75□□□□□ -1.01
SNP1YIL061C YPT11P48559 417 aa8.75□□□□□ -1.01
SNP1YIL061C MSN5P52918 1224 aa8.75□□□□□ -1.01
SNP1YIL061C ARG82P07250 355 aa8.74□□□□□ -1.01
SNP1YIL061C SWI4P25302 1093 aaKnown RBP8.74□□□□□ -1.01
SNP1YIL061C MPE1P35728 441 aaKnown RBP8.74□□□□□ -1.01
SNP1YIL061C MRPL10P36520 322 aa8.74□□□□□ -1.01
SNP1YIL061C PIP2P52960 996 aa8.74□□□□□ -1.01
SNP1YIL061C PRP42Q03776 544 aaKnown RBP8.74□□□□□ -1.01
SNP1YIL061C RAD61Q99359 647 aa8.74□□□□□ -1.01
SNP1YIL061C TRS33Q99394 268 aa8.74□□□□□ -1.01
SNP1YIL061C FLO1P32768 1537 aa8.74□□□□□ -1.01
SNP1YIL061C HSP82P02829 709 aaKnown RBP8.73□□□□□ -1.01
SNP1YIL061C GPA1P08539 472 aa8.73□□□□□ -1.01
SNP1YIL061C MAK31P23059 88 aa8.73□□□□□ -1.01
SNP1YIL061C APL6P46682 809 aa8.73□□□□□ -1.01
SNP1YIL061C NSG2P53898 299 aa8.73□□□□□ -1.01
SNP1YIL061C MRD1Q06106 887 aaKnown RBP8.73□□□□□ -1.01
SNP1YIL061C DCS2Q12123 353 aa8.73□□□□□ -1.01
SNP1YIL061C ATE1P16639 503 aa8.72□□□□□ -1.01
SNP1YIL061C MCM2P29469 868 aa8.72□□□□□ -1.01
SNP1YIL061C ASF1P32447 279 aa8.72□□□□□ -1.01
SNP1YIL061C MIC60P36112 540 aa8.72□□□□□ -1.01
SNP1YIL061C MAL31P38156 614 aa8.72□□□□□ -1.01
SNP1YIL061C MYO5Q04439 1219 aaKnown RBP8.72□□□□□ -1.01
SNP1YIL061C GAS5Q08193 484 aa8.72□□□□□ -1.01
SNP1YIL061C YPL260WQ08977 551 aa8.72□□□□□ -1.01
SNP1YIL061C RPL22AP05749 121 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C CDC6P09119 513 aa8.71□□□□□ -1.02
SNP1YIL061C HCA4P20448 770 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C RNR3P21672 869 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C YKT6P36015 200 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C YER130CP39959 443 aa8.71□□□□□ -1.02
SNP1YIL061C MSH4P40965 878 aaPredicted RBP8.71□□□□□ -1.02
SNP1YIL061C ALG2P43636 503 aa8.71□□□□□ -1.02
SNP1YIL061C SSL2Q00578 843 aa8.71□□□□□ -1.02
SNP1YIL061C KIN4Q01919 800 aa8.71□□□□□ -1.02
SNP1YIL061C SGD1Q06132 899 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms