RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W PUF6Q04373 656 aaKnown RBP3.41□□□□□ -1.86
SMD1YGR074W KAR5Q04746 504 aa3.41□□□□□ -1.86
SMD1YGR074W TRS33Q99394 268 aa3.41□□□□□ -1.86
SMD1YGR074W MSB1P21339 1137 aaKnown RBP3.4□□□□□ -1.87
SMD1YGR074W VMA3P25515 160 aa3.4□□□□□ -1.87
SMD1YGR074W LDH1P38139 375 aa3.4□□□□□ -1.87
SMD1YGR074W SSF1P38789 453 aaPredicted RBP3.4□□□□□ -1.87
SMD1YGR074W LEM3P42838 414 aa3.4□□□□□ -1.87
SMD1YGR074W ROM1P53046 1155 aa3.4□□□□□ -1.87
SMD1YGR074W REC8Q12188 680 aa3.4□□□□□ -1.87
SMD1YGR074W FUR4P05316 633 aaKnown RBP3.39□□□□□ -1.87
SMD1YGR074W MRPL33P20084 86 aa3.39□□□□□ -1.87
SMD1YGR074W HEM3P28789 327 aa3.39□□□□□ -1.87
SMD1YGR074W SEC20P28791 383 aa3.39□□□□□ -1.87
SMD1YGR074W SEG2P34250 1132 aa3.39□□□□□ -1.87
SMD1YGR074W ISW1P38144 1129 aa3.39□□□□□ -1.87
SMD1YGR074W STM1P39015 273 aaKnown RBP3.39□□□□□ -1.87
SMD1YGR074W YJL181WP46987 611 aa3.39□□□□□ -1.87
SMD1YGR074W PRP43P53131 767 aaKnown RBP3.39□□□□□ -1.87
SMD1YGR074W NOP7P53261 605 aaKnown RBP3.39□□□□□ -1.87
SMD1YGR074W PUN1Q06991 263 aa3.39□□□□□ -1.87
SMD1YGR074W MAE1P36013 669 aaKnown RBP3.38□□□□□ -1.87
SMD1YGR074W GIP4P39732 760 aa3.38□□□□□ -1.87
SMD1YGR074W PPT1P53043 513 aa3.38□□□□□ -1.87
SMD1YGR074W GUP1P53154 560 aa3.38□□□□□ -1.87
SMD1YGR074W SNU71P53207 620 aaKnown RBP3.38□□□□□ -1.87
SMD1YGR074W SRS2P12954 1174 aa3.37□□□□□ -1.87
SMD1YGR074W ASF1P32447 279 aa3.37□□□□□ -1.87
SMD1YGR074W RRN6P32786 894 aa3.37□□□□□ -1.87
SMD1YGR074W BSD2P38356 321 aa3.37□□□□□ -1.87
SMD1YGR074W YIL165CP40446 119 aa3.37□□□□□ -1.87
SMD1YGR074W ECL1P48235 211 aa3.37□□□□□ -1.87
SMD1YGR074W FOX2Q02207 900 aaKnown RBP3.37□□□□□ -1.87
SMD1YGR074W CAB1Q04430 367 aa3.37□□□□□ -1.87
SMD1YGR074W PNP1Q05788 311 aa3.37□□□□□ -1.87
SMD1YGR074W YBL113CQ7M4S9 792 aa3.37□□□□□ -1.87
SMD1YGR074W PAN5P38787 379 aa3.36□□□□□ -1.87
SMD1YGR074W INP51P40559 946 aaKnown RBP3.36□□□□□ -1.87
SMD1YGR074W CWC15Q03772 175 aaKnown RBP3.36□□□□□ -1.87
SMD1YGR074W TAD3Q9URQ3 322 aa3.36□□□□□ -1.87
SMD1YGR074W FIR1P40020 876 aa3.35□□□□□ -1.87
SMD1YGR074W TAF1P46677 1066 aa3.35□□□□□ -1.87
SMD1YGR074W SPO71Q03868 1245 aa3.35□□□□□ -1.87
SMD1YGR074W NSI1Q12457 570 aa3.35□□□□□ -1.87
SMD1YGR074W SUV3P32580 737 aa3.34□□□□□ -1.87
SMD1YGR074W YPT53P36019 220 aa3.34□□□□□ -1.87
SMD1YGR074W GRS1P38088 690 aaKnown RBP3.34□□□□□ -1.87
SMD1YGR074W YBR197CP38306 217 aa3.34□□□□□ -1.87
SMD1YGR074W ERP5P38819 212 aa3.34□□□□□ -1.87
SMD1YGR074W THI12P42883 340 aa3.34□□□□□ -1.87
SMD1YGR074W THI5P43534 340 aa3.34□□□□□ -1.87
SMD1YGR074W THI11P47183 340 aa3.34□□□□□ -1.87
SMD1YGR074W NCE103P53615 221 aa3.34□□□□□ -1.87
SMD1YGR074W BIO5P53744 561 aaKnown RBP3.34□□□□□ -1.87
SMD1YGR074W GIC2Q06648 383 aa3.34□□□□□ -1.87
SMD1YGR074W THI13Q07748 340 aa3.34□□□□□ -1.87
SMD1YGR074W LRG1P35688 1017 aa3.33□□□□□ -1.88
SMD1YGR074W GLO3P38682 493 aaKnown RBP3.33□□□□□ -1.88
SMD1YGR074W POL5P39985 1022 aaKnown RBP3.33□□□□□ -1.88
SMD1YGR074W ATG1P53104 897 aa3.33□□□□□ -1.88
SMD1YGR074W SOG2Q08817 791 aa3.33□□□□□ -1.88
SMD1YGR074W MSC6Q08818 692 aaKnown RBP3.33□□□□□ -1.88
SMD1YGR074W MSN1P22148 382 aa3.32□□□□□ -1.88
SMD1YGR074W POL12P38121 705 aaPredicted RBP3.32□□□□□ -1.88
SMD1YGR074W YHL050CP38721 697 aa3.32□□□□□ -1.88
SMD1YGR074W YHR219WP38900 624 aa3.32□□□□□ -1.88
SMD1YGR074W QDR1P40475 563 aa3.32□□□□□ -1.88
SMD1YGR074W ALD4P46367 519 aaKnown RBP3.32□□□□□ -1.88
SMD1YGR074W SEN54Q02825 467 aaPredicted RBP3.32□□□□□ -1.88
SMD1YGR074W HDA2Q06629 674 aa3.32□□□□□ -1.88
SMD1YGR074W ELG1Q12050 791 aa3.32□□□□□ -1.88
SMD1YGR074W AIM44Q99299 758 aa3.32□□□□□ -1.88
SMD1YGR074W ISC10P32645 267 aa3.31□□□□□ -1.88
SMD1YGR074W AIM46P38885 310 aa3.31□□□□□ -1.88
SMD1YGR074W IPL1P38991 367 aa3.31□□□□□ -1.88
SMD1YGR074W MET10P39692 1035 aa3.31□□□□□ -1.88
SMD1YGR074W NEO1P40527 1151 aa3.31□□□□□ -1.88
SMD1YGR074W ACF4P47129 309 aa3.31□□□□□ -1.88
SMD1YGR074W SDH1Q00711 640 aa3.31□□□□□ -1.88
SMD1YGR074W EMG1Q06287 252 aaKnown RBP3.31□□□□□ -1.88
SMD1YGR074W FUS1P11710 512 aa3.3□□□□□ -1.88
SMD1YGR074W GAS1P22146 559 aaKnown RBP3.3□□□□□ -1.88
SMD1YGR074W MGE1P38523 228 aa3.3□□□□□ -1.88
SMD1YGR074W BOL3P39724 118 aa3.3□□□□□ -1.88
SMD1YGR074W MDJ2P42834 146 aa3.3□□□□□ -1.88
SMD1YGR074W FAR11P53917 953 aa3.3□□□□□ -1.88
SMD1YGR074W DFG16Q99234 619 aa3.3□□□□□ -1.88
SMD1YGR074W TRL1P09880 827 aaKnown RBP3.29□□□□□ -1.88
SMD1YGR074W PPX1P38698 397 aa3.29□□□□□ -1.88
SMD1YGR074W HXT8P40886 569 aa3.29□□□□□ -1.88
SMD1YGR074W MMM1P41800 426 aa3.29□□□□□ -1.88
SMD1YGR074W POL32P47110 350 aa3.29□□□□□ -1.88
SMD1YGR074W KIP3P53086 805 aaKnown RBP3.29□□□□□ -1.88
SMD1YGR074W ALD3P54114 506 aa3.29□□□□□ -1.88
SMD1YGR074W GCD1P09032 578 aaPredicted RBP3.28□□□□□ -1.88
SMD1YGR074W TFA2P36145 328 aa3.28□□□□□ -1.88
SMD1YGR074W CIT3P43635 486 aa3.28□□□□□ -1.88
SMD1YGR074W YOR059CQ08448 450 aaKnown RBP3.28□□□□□ -1.88
SMD1YGR074W LSO1Q3E827 93 aa3.28□□□□□ -1.88
SMD1YGR074W ERS1P17261 260 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms