RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	LEU2	P04173	364 aa	Predicted RBP	4.97	□□□□□ -1.61
TPA1	YER049W	AIM9	P40053	627 aa	Known RBP	4.97	□□□□□ -1.61
TPA1	YER049W	RCM1	P53972	490 aa		4.97	□□□□□ -1.61
TPA1	YER049W	PUF6	Q04373	656 aa	Known RBP	4.97	□□□□□ -1.61
TPA1	YER049W	HDA3	Q06623	655 aa		4.97	□□□□□ -1.61
TPA1	YER049W	YBL113C	Q7M4S9	792 aa		4.97	□□□□□ -1.61
TPA1	YER049W	SLD2	P34252	453 aa		4.97	□□□□□ -1.61
TPA1	YER049W	PAP2	P53632	584 aa	Known RBP	4.97	□□□□□ -1.61
TPA1	YER049W	SYH1	Q02875	849 aa	Known RBP	4.97	□□□□□ -1.61
TPA1	YER049W	FRK1	Q03002	865 aa	Predicted RBP	4.97	□□□□□ -1.61
TPA1	YER049W	NOT3	P06102	836 aa	Known RBP	4.96	□□□□□ -1.62
TPA1	YER049W	ERP5	P38819	212 aa		4.96	□□□□□ -1.62
TPA1	YER049W	BOL3	P39724	118 aa		4.96	□□□□□ -1.62
TPA1	YER049W	MTR4	P47047	1073 aa	Known RBP	4.96	□□□□□ -1.62
TPA1	YER049W	ECM16	Q04217	1267 aa	Known RBP	4.96	□□□□□ -1.62
TPA1	YER049W	KAR5	Q04746	504 aa		4.95	□□□□□ -1.62
TPA1	YER049W	KNS1	P32350	737 aa	Predicted RBP	4.95	□□□□□ -1.62
TPA1	YER049W	ARL1	P38116	183 aa	Known RBP	4.95	□□□□□ -1.62
TPA1	YER049W	PRP43	P53131	767 aa	Known RBP	4.95	□□□□□ -1.62
TPA1	YER049W	PNP1	Q05788	311 aa		4.95	□□□□□ -1.62
TPA1	YER049W	TRL1	P09880	827 aa	Known RBP	4.94	□□□□□ -1.62
TPA1	YER049W	SUV3	P32580	737 aa		4.94	□□□□□ -1.62
TPA1	YER049W	FBP26	P32604	452 aa		4.94	□□□□□ -1.62
TPA1	YER049W	YFL034W	P43564	1073 aa		4.94	□□□□□ -1.62
TPA1	YER049W	SRS2	P12954	1174 aa		4.93	□□□□□ -1.62
TPA1	YER049W	UBP1	P25037	809 aa		4.93	□□□□□ -1.62
TPA1	YER049W	NTH2	P35172	780 aa		4.93	□□□□□ -1.62
TPA1	YER049W	MNN4	P36044	1178 aa		4.93	□□□□□ -1.62
TPA1	YER049W	ISU1	Q03020	165 aa		4.93	□□□□□ -1.62
TPA1	YER049W	PUN1	Q06991	263 aa		4.93	□□□□□ -1.62
TPA1	YER049W	SPT2	P06843	333 aa	Predicted RBP	4.93	□□□□□ -1.62
TPA1	YER049W	RPS6A	P0CX37	236 aa	Known RBP	4.93	□□□□□ -1.62
TPA1	YER049W	RPS6B	P0CX38	236 aa	Predicted RBP	4.93	□□□□□ -1.62
TPA1	YER049W	VAN1	P23642	535 aa		4.93	□□□□□ -1.62
TPA1	YER049W	MRT4	P33201	236 aa	Known RBP	4.93	□□□□□ -1.62
TPA1	YER049W	ITC1	P53125	1264 aa		4.93	□□□□□ -1.62
TPA1	YER049W	RIA1	P53893	1110 aa		4.93	□□□□□ -1.62
TPA1	YER049W	YNL050C	P53952	270 aa		4.93	□□□□□ -1.62
TPA1	YER049W	YRF1-2	P40105	1681 aa		4.93	□□□□□ -1.62
TPA1	YER049W	ADE6	P38972	1358 aa	Known RBP	4.93	□□□□□ -1.62
TPA1	YER049W	SWI5	P08153	709 aa		4.92	□□□□□ -1.62
TPA1	YER049W	UTR2	P32623	467 aa		4.92	□□□□□ -1.62
TPA1	YER049W	BCK2	P33306	851 aa		4.92	□□□□□ -1.62
TPA1	YER049W	MKS1	P34072	584 aa		4.92	□□□□□ -1.62
TPA1	YER049W	GYP7	P48365	746 aa		4.92	□□□□□ -1.62
TPA1	YER049W	DSD1	P53095	428 aa		4.92	□□□□□ -1.62
TPA1	YER049W	TRS33	Q99394	268 aa		4.92	□□□□□ -1.62
TPA1	YER049W	RRP5	Q05022	1729 aa	Known RBP	4.92	□□□□□ -1.62
TPA1	YER049W	YIL177C	P40434	1758 aa		4.92	□□□□□ -1.62
TPA1	YER049W	YJL225C	P40889	1758 aa		4.92	□□□□□ -1.62
TPA1	YER049W	CYT1	P07143	309 aa		4.91	□□□□□ -1.62
TPA1	YER049W	AKL1	P38080	1108 aa	Known RBP	4.91	□□□□□ -1.62
TPA1	YER049W	STM1	P39015	273 aa	Known RBP	4.91	□□□□□ -1.62
TPA1	YER049W	MDJ2	P42834	146 aa		4.91	□□□□□ -1.62
TPA1	YER049W	RAD50	P12753	1312 aa		4.91	□□□□□ -1.62
TPA1	YER049W	GRS1	P38088	690 aa	Known RBP	4.91	□□□□□ -1.62
TPA1	YER049W	YBL086C	P38177	466 aa		4.91	□□□□□ -1.62
TPA1	YER049W	MAM1	P40065	302 aa		4.91	□□□□□ -1.62
TPA1	YER049W	RRT14	P40470	206 aa		4.91	□□□□□ -1.62
TPA1	YER049W	ATG1	P53104	897 aa		4.91	□□□□□ -1.62
TPA1	YER049W	NUP145	P49687	1317 aa		4.91	□□□□□ -1.62
TPA1	YER049W	TY4B-H	P0C2J7	1802 aa		4.9	□□□□□ -1.62
TPA1	YER049W	DUR1,2	P32528	1835 aa	Known RBP	4.9	□□□□□ -1.62
TPA1	YER049W	TY4B-J	P47024	1803 aa		4.9	□□□□□ -1.62
TPA1	YER049W	DLD1	P32891	587 aa		4.9	□□□□□ -1.62
TPA1	YER049W	GCR2	Q01722	534 aa		4.9	□□□□□ -1.62
TPA1	YER049W	SRT1	Q03175	343 aa		4.9	□□□□□ -1.62
TPA1	YER049W	NKP2	Q06162	153 aa		4.9	□□□□□ -1.62
TPA1	YER049W	RPS19A	P07280	144 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	RPS19B	P07281	144 aa	Predicted RBP	4.89	□□□□□ -1.63
TPA1	YER049W	STE6	P12866	1290 aa		4.89	□□□□□ -1.63
TPA1	YER049W	HEM3	P28789	327 aa		4.89	□□□□□ -1.63
TPA1	YER049W	YHL050C	P38721	697 aa		4.89	□□□□□ -1.63
TPA1	YER049W	YHR219W	P38900	624 aa		4.89	□□□□□ -1.63
TPA1	YER049W	CLA4	P48562	842 aa		4.89	□□□□□ -1.63
TPA1	YER049W	PIL1	P53252	339 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	YNR029C	P53729	429 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	CTR9	P89105	1077 aa		4.89	□□□□□ -1.63
TPA1	YER049W	DFG5	Q05031	458 aa		4.89	□□□□□ -1.63
TPA1	YER049W	FUR4	P05316	633 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	NGR1	P32831	672 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	ZDS1	P50111	915 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
TPA1	YER049W	ROM2	P51862	1356 aa	Known RBP	4.88	□□□□□ -1.63
TPA1	YER049W	RPS24A	P0CX31	135 aa	Known RBP	4.88	□□□□□ -1.63
TPA1	YER049W	RPS24B	P0CX32	135 aa	Known RBP	4.88	□□□□□ -1.63
TPA1	YER049W	AMS1	P22855	1083 aa		4.88	□□□□□ -1.63
TPA1	YER049W	BOI1	P38041	980 aa	Known RBP	4.88	□□□□□ -1.63
TPA1	YER049W	YNG2	P38806	282 aa	Known RBP	4.88	□□□□□ -1.63
TPA1	YER049W	XDJ1	P39102	459 aa		4.88	□□□□□ -1.63
TPA1	YER049W	BDH2	P39713	417 aa		4.88	□□□□□ -1.63
TPA1	YER049W	QDR1	P40475	563 aa		4.88	□□□□□ -1.63
TPA1	YER049W	HED1	Q03937	162 aa		4.88	□□□□□ -1.63
TPA1	YER049W	CSI1	Q04368	295 aa		4.88	□□□□□ -1.63
TPA1	YER049W	WTM2	Q12206	467 aa		4.88	□□□□□ -1.63
TPA1	YER049W	CDC16	P09798	840 aa		4.87	□□□□□ -1.63
TPA1	YER049W	SEC20	P28791	383 aa		4.87	□□□□□ -1.63
TPA1	YER049W	BRN1	P38170	754 aa		4.87	□□□□□ -1.63
TPA1	YER049W	GLO3	P38682	493 aa	Known RBP	4.87	□□□□□ -1.63
TPA1	YER049W	COG8	Q04632	607 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms