RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHS1	YDL225W	ICP55	P40051	511 aa		4.64	□□□□□ -1.67
SHS1	YDL225W	YER156C	P40093	338 aa	Known RBP	4.64	□□□□□ -1.67
SHS1	YDL225W	MTC5	Q03897	1148 aa		4.64	□□□□□ -1.67
SHS1	YDL225W	FLP1	P03870	423 aa		4.64	□□□□□ -1.67
SHS1	YDL225W	YJR107W	P47145	328 aa		4.64	□□□□□ -1.67
SHS1	YDL225W	COB	P00163	385 aa		4.63	□□□□□ -1.67
SHS1	YDL225W	PYC2	P32327	1180 aa	Known RBP	4.63	□□□□□ -1.67
SHS1	YDL225W	ECM2	P38241	364 aa	Known RBP	4.63	□□□□□ -1.67
SHS1	YDL225W	PPT1	P53043	513 aa		4.63	□□□□□ -1.67
SHS1	YDL225W	OYE2	Q03558	400 aa	Known RBP	4.63	□□□□□ -1.67
SHS1	YDL225W	TY1A-DR2	Q03964	440 aa	Known RBP	4.63	□□□□□ -1.67
SHS1	YDL225W	OXR1	Q08952	273 aa		4.63	□□□□□ -1.67
SHS1	YDL225W	YNR014W	P53719	212 aa		4.62	□□□□□ -1.67
SHS1	YDL225W	YCS4	Q06156	1176 aa		4.62	□□□□□ -1.67
SHS1	YDL225W	RSC2	Q06488	889 aa		4.62	□□□□□ -1.67
SHS1	YDL225W	PRK1	P40494	810 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	YJL181W	P46987	611 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	NSG2	P53898	299 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	TOS4	Q06266	489 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	PUS1	Q12211	544 aa	Known RBP	4.61	□□□□□ -1.67
SHS1	YDL225W	MRP10	O75012	95 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	MCM2	P29469	868 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	KNS1	P32350	737 aa	Predicted RBP	4.61	□□□□□ -1.67
SHS1	YDL225W	DUR3	P33413	735 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	PHM7	Q12252	991 aa		4.61	□□□□□ -1.67
SHS1	YDL225W	GPM1	P00950	247 aa	Known RBP	4.6	□□□□□ -1.67
SHS1	YDL225W	INP51	P40559	946 aa	Known RBP	4.6	□□□□□ -1.67
SHS1	YDL225W	NUT1	P53114	1132 aa		4.6	□□□□□ -1.67
SHS1	YDL225W	PAM1	P37304	830 aa	Known RBP	4.59	□□□□□ -1.67
SHS1	YDL225W	RPS26A	P39938	119 aa	Known RBP	4.59	□□□□□ -1.67
SHS1	YDL225W	RPS26B	P39939	119 aa	Known RBP	4.59	□□□□□ -1.67
SHS1	YDL225W	BOI2	P39969	1040 aa		4.59	□□□□□ -1.67
SHS1	YDL225W	FYV10	P40492	516 aa		4.59	□□□□□ -1.67
SHS1	YDL225W	NOP7	P53261	605 aa	Known RBP	4.59	□□□□□ -1.67
SHS1	YDL225W	DAL4	Q04895	635 aa		4.59	□□□□□ -1.67
SHS1	YDL225W	SPR28	Q04921	423 aa		4.59	□□□□□ -1.67
SHS1	YDL225W	FUS1	P11710	512 aa		4.58	□□□□□ -1.68
SHS1	YDL225W	PDC5	P16467	563 aa	Known RBP	4.58	□□□□□ -1.68
SHS1	YDL225W	PRP40	P33203	583 aa	Known RBP	4.58	□□□□□ -1.68
SHS1	YDL225W	RVS167	P39743	482 aa	Known RBP	4.58	□□□□□ -1.68
SHS1	YDL225W	MON1	P53129	644 aa		4.58	□□□□□ -1.68
SHS1	YDL225W	BIO5	P53744	561 aa	Known RBP	4.58	□□□□□ -1.68
SHS1	YDL225W	ALD3	P54114	506 aa		4.58	□□□□□ -1.68
SHS1	YDL225W	MSH6	Q03834	1242 aa		4.58	□□□□□ -1.68
SHS1	YDL225W	HXK1	P04806	485 aa	Known RBP	4.57	□□□□□ -1.68
SHS1	YDL225W	MDJ1	P35191	511 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	FAA3	P39002	694 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	YGR122W	P53272	402 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	GLO4	Q12320	285 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	CYC8	P14922	966 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	NPR1	P22211	790 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	UGA4	P32837	571 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	TFA2	P36145	328 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	YNR065C	P53751	1116 aa		4.57	□□□□□ -1.68
SHS1	YDL225W	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
SHS1	YDL225W	MCM5	P29496	775 aa	Known RBP	4.56	□□□□□ -1.68
SHS1	YDL225W	PEP7	P32609	515 aa		4.56	□□□□□ -1.68
SHS1	YDL225W	RIM11	P38615	370 aa		4.56	□□□□□ -1.68
SHS1	YDL225W	MET10	P39692	1035 aa		4.56	□□□□□ -1.68
SHS1	YDL225W	SAP155	P43612	1002 aa		4.56	□□□□□ -1.68
SHS1	YDL225W	PMT7	Q06644	662 aa		4.56	□□□□□ -1.68
SHS1	YDL225W	CMR1	Q12510	522 aa	Known RBP	4.56	□□□□□ -1.68
SHS1	YDL225W	KAR2	P16474	682 aa	Known RBP	4.55	□□□□□ -1.68
SHS1	YDL225W	ALG14	P38242	237 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	YJR124C	P47159	448 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	YAF9	P53930	226 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	ULP1	Q02724	621 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	YMR187C	Q03236	431 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	SVF1	Q05515	481 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	SOG2	Q08817	791 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	NHA1	Q99271	985 aa		4.55	□□□□□ -1.68
SHS1	YDL225W	HVG1	P0CE11	249 aa		4.54	□□□□□ -1.68
SHS1	YDL225W	PRP5	P21372	849 aa	Predicted RBP	4.54	□□□□□ -1.68
SHS1	YDL225W	AMN1	P38285	549 aa	Predicted RBP	4.54	□□□□□ -1.68
SHS1	YDL225W	MRPS18	P42847	217 aa		4.54	□□□□□ -1.68
SHS1	YDL225W	SBE2	P42223	864 aa	Known RBP	4.54	□□□□□ -1.68
SHS1	YDL225W	LSB6	P42951	607 aa		4.54	□□□□□ -1.68
SHS1	YDL225W	GUP1	P53154	560 aa		4.54	□□□□□ -1.68
SHS1	YDL225W	SOK2	P53438	785 aa	Predicted RBP	4.54	□□□□□ -1.68
SHS1	YDL225W	RMD1	Q03441	430 aa		4.54	□□□□□ -1.68
SHS1	YDL225W	ADI1	Q03677	179 aa		4.54	□□□□□ -1.68
SHS1	YDL225W	NAR1	P23503	491 aa	Known RBP	4.53	□□□□□ -1.68
SHS1	YDL225W	PGM2	P37012	569 aa	Known RBP	4.53	□□□□□ -1.68
SHS1	YDL225W	GIP2	P40036	548 aa		4.53	□□□□□ -1.68
SHS1	YDL225W	YPL109C	Q02981	657 aa		4.53	□□□□□ -1.68
SHS1	YDL225W	JIP5	Q06214	492 aa	Predicted RBP	4.53	□□□□□ -1.68
SHS1	YDL225W	TDA6	Q06466	467 aa		4.53	□□□□□ -1.68
SHS1	YDL225W	YPR053C	Q6Q5F3	151 aa		4.53	□□□□□ -1.68
SHS1	YDL225W	PRE9	P23638	258 aa	Known RBP	4.52	□□□□□ -1.69
SHS1	YDL225W	FET4	P40988	552 aa		4.52	□□□□□ -1.69
SHS1	YDL225W	GIS4	Q04233	774 aa		4.52	□□□□□ -1.69
SHS1	YDL225W	ESF1	Q06344	628 aa	Known RBP	4.52	□□□□□ -1.69
SHS1	YDL225W	MCD1	Q12158	566 aa		4.52	□□□□□ -1.69
SHS1	YDL225W	NEO1	P40527	1151 aa		4.51	□□□□□ -1.69
SHS1	YDL225W	LEM3	P42838	414 aa		4.51	□□□□□ -1.69
SHS1	YDL225W	HTS1	P07263	546 aa	Known RBP	4.51	□□□□□ -1.69
SHS1	YDL225W	MCX1	P38323	520 aa	Predicted RBP	4.51	□□□□□ -1.69
SHS1	YDL225W	PIC2	P40035	300 aa		4.51	□□□□□ -1.69
SHS1	YDL225W	YFL066C	P43538	392 aa		4.51	□□□□□ -1.69
SHS1	YDL225W	RSM26	P47141	266 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms