RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C MRPS18P42847 217 aa5.11□□□□□ -1.59
PRP11YDL043C NRD1P53617 575 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
PRP11YDL043C NSE3Q05541 303 aa5.11□□□□□ -1.59
PRP11YDL043C MCD1Q12158 566 aa5.11□□□□□ -1.59
PRP11YDL043C FLP1P03870 423 aa5.1□□□□□ -1.59
PRP11YDL043C CIT2P08679 460 aa5.1□□□□□ -1.59
PRP11YDL043C STI1P15705 589 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
PRP11YDL043C KAR2P16474 682 aaKnown RBP5.1□□□□□ -1.59
PRP11YDL043C PRE9P23638 258 aaKnown RBP5.1□□□□□ -1.59
PRP11YDL043C PRP40P33203 583 aaKnown RBP5.1□□□□□ -1.59
PRP11YDL043C ISW1P38144 1129 aa5.1□□□□□ -1.59
PRP11YDL043C YHL008CP38750 627 aa5.1□□□□□ -1.59
PRP11YDL043C OSW7P43611 510 aa5.1□□□□□ -1.59
PRP11YDL043C JJJ2P46997 583 aa5.1□□□□□ -1.59
PRP11YDL043C MSN5P52918 1224 aa5.1□□□□□ -1.59
PRP11YDL043C SHM1P37292 490 aaPredicted RBP5.09□□□□□ -1.59
PRP11YDL043C GIP1P38229 639 aa5.09□□□□□ -1.59
PRP11YDL043C ARG82P07250 355 aa5.08□□□□□ -1.6
PRP11YDL043C RPC31P17890 251 aa5.08□□□□□ -1.6
PRP11YDL043C BSD2P38356 321 aa5.08□□□□□ -1.6
PRP11YDL043C AAD14P42884 376 aa5.08□□□□□ -1.6
PRP11YDL043C MTO1P53070 669 aa5.08□□□□□ -1.6
PRP11YDL043C FAR11P53917 953 aa5.08□□□□□ -1.6
PRP11YDL043C YPL109CQ02981 657 aa5.08□□□□□ -1.6
PRP11YDL043C RPN4Q03465 531 aa5.08□□□□□ -1.6
PRP11YDL043C YOR296WQ08748 1289 aa5.08□□□□□ -1.6
PRP11YDL043C PHM7Q12252 991 aa5.08□□□□□ -1.6
PRP11YDL043C CDC34P14682 295 aa5.07□□□□□ -1.6
PRP11YDL043C MCM5P29496 775 aaKnown RBP5.07□□□□□ -1.6
PRP11YDL043C IRE1P32361 1115 aa5.07□□□□□ -1.6
PRP11YDL043C PPG1P32838 368 aa5.07□□□□□ -1.6
PRP11YDL043C MDJ1P35191 511 aa5.07□□□□□ -1.6
PRP11YDL043C GDE1Q02979 1223 aa5.07□□□□□ -1.6
PRP11YDL043C DPH6Q12429 685 aa5.07□□□□□ -1.6
PRP11YDL043C NAB2P32505 525 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
PRP11YDL043C RRP14P36080 434 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C AHP1P38013 176 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C AIM46P38885 310 aa5.06□□□□□ -1.6
PRP11YDL043C BUD6P41697 788 aa5.06□□□□□ -1.6
PRP11YDL043C YFR016CP43597 1233 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C RPS0BP46654 252 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C FAA4P47912 694 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C CTR9P89105 1077 aa5.06□□□□□ -1.6
PRP11YDL043C ULP1Q02724 621 aa5.06□□□□□ -1.6
PRP11YDL043C ADI1Q03677 179 aa5.06□□□□□ -1.6
PRP11YDL043C EMG1Q06287 252 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C BDF2Q07442 638 aa5.06□□□□□ -1.6
PRP11YDL043C CDC53Q12018 815 aaKnown RBP5.06□□□□□ -1.6
PRP11YDL043C LEU1P07264 779 aaKnown RBP5.05□□□□□ -1.6
PRP11YDL043C PDC6P26263 563 aaKnown RBP5.05□□□□□ -1.6
PRP11YDL043C DAL1P32375 460 aa5.05□□□□□ -1.6
PRP11YDL043C SLA1P32790 1244 aa5.05□□□□□ -1.6
PRP11YDL043C DUT1P33317 147 aa5.05□□□□□ -1.6
PRP11YDL043C MNN4P36044 1178 aa5.05□□□□□ -1.6
PRP11YDL043C PBP2P38151 413 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
PRP11YDL043C ECM2P38241 364 aaKnown RBP5.05□□□□□ -1.6
PRP11YDL043C TAT2P38967 592 aa5.05□□□□□ -1.6
PRP11YDL043C PIC2P40035 300 aa5.05□□□□□ -1.6
PRP11YDL043C NUT1P53114 1132 aa5.05□□□□□ -1.6
PRP11YDL043C ALG12P53730 551 aa5.05□□□□□ -1.6
PRP11YDL043C MSH6Q03834 1242 aa5.05□□□□□ -1.6
PRP11YDL043C PSH1Q12161 406 aa5.05□□□□□ -1.6
PRP11YDL043C YOR131CQ12486 218 aa5.05□□□□□ -1.6
PRP11YDL043C COBP00163 385 aa5.04□□□□□ -1.6
PRP11YDL043C GRX1P25373 110 aaKnown RBP5.04□□□□□ -1.6
PRP11YDL043C UGA4P32837 571 aa5.04□□□□□ -1.6
PRP11YDL043C FPR3P38911 411 aaKnown RBP5.04□□□□□ -1.6
PRP11YDL043C YIL165CP40446 119 aa5.04□□□□□ -1.6
PRP11YDL043C SKP1P52286 194 aa5.04□□□□□ -1.6
PRP11YDL043C MON1P53129 644 aa5.04□□□□□ -1.6
PRP11YDL043C YGR053CP53234 283 aa5.04□□□□□ -1.6
PRP11YDL043C UBP2Q01476 1272 aa5.04□□□□□ -1.6
PRP11YDL043C TY1A-DR3Q12441 440 aa5.04□□□□□ -1.6
PRP11YDL043C GCR1P07261 785 aa5.03□□□□□ -1.6
PRP11YDL043C DUR3P33413 735 aa5.03□□□□□ -1.6
PRP11YDL043C RVS167P39743 482 aaKnown RBP5.03□□□□□ -1.6
PRP11YDL043C VTC4P47075 721 aa5.03□□□□□ -1.6
PRP11YDL043C HUL5P53119 910 aa5.03□□□□□ -1.6
PRP11YDL043C LSC2P53312 427 aa5.03□□□□□ -1.6
PRP11YDL043C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
PRP11YDL043C TDA5Q06417 326 aaKnown RBP5.03□□□□□ -1.6
PRP11YDL043C OPI10Q08202 246 aa5.03□□□□□ -1.6
PRP11YDL043C RTT10Q08924 1013 aa5.03□□□□□ -1.6
PRP11YDL043C PRI2P20457 528 aa5.02□□□□□ -1.61
PRP11YDL043C PYC2P32327 1180 aaKnown RBP5.02□□□□□ -1.61
PRP11YDL043C SPF1P39986 1215 aaKnown RBP5.02□□□□□ -1.61
PRP11YDL043C NOP2P40991 618 aaKnown RBP5.02□□□□□ -1.61
PRP11YDL043C ROG3P43602 733 aa5.02□□□□□ -1.61
PRP11YDL043C SAP155P43612 1002 aa5.02□□□□□ -1.61
PRP11YDL043C ITC1P53125 1264 aa5.02□□□□□ -1.61
PRP11YDL043C CUS1Q02554 436 aaPredicted RBP5.02□□□□□ -1.61
PRP11YDL043C NAN1Q02931 896 aaKnown RBP5.02□□□□□ -1.61
PRP11YDL043C DLD1P32891 587 aa5.01□□□□□ -1.61
PRP11YDL043C TY1A-MR1Q04215 440 aa5.01□□□□□ -1.61
PRP11YDL043C PMT7Q06644 662 aa5.01□□□□□ -1.61
PRP11YDL043C TMA46Q12000 345 aaKnown RBP5.01□□□□□ -1.61
PRP11YDL043C CCP1P00431 361 aa5□□□□□ -1.61
PRP11YDL043C RAD4P14736 754 aa5□□□□□ -1.61
PRP11YDL043C RGP1P16664 663 aa5□□□□□ -1.61
PRP11YDL043C SQT1P35184 431 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms