RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W PRT1P06103 763 aaKnown RBP5.08□□□□□ -1.6
VHC1YBR235W SUI3P09064 285 aaKnown RBP5.08□□□□□ -1.6
VHC1YBR235W BIK1P11709 440 aa5.08□□□□□ -1.6
VHC1YBR235W ATO2P32907 282 aa5.08□□□□□ -1.6
VHC1YBR235W RPC37P36121 282 aa5.08□□□□□ -1.6
VHC1YBR235W CAF130P53280 1122 aaPredicted RBP5.08□□□□□ -1.6
VHC1YBR235W SSK2P53599 1579 aa5.08□□□□□ -1.6
VHC1YBR235W GEA2P39993 1459 aaKnown RBP5.08□□□□□ -1.6
VHC1YBR235W GCD2P12754 651 aaPredicted RBP5.08□□□□□ -1.6
VHC1YBR235W SEC15P22224 910 aa5.08□□□□□ -1.6
VHC1YBR235W ARG1P22768 420 aa5.08□□□□□ -1.6
VHC1YBR235W BUD14P27637 709 aa5.08□□□□□ -1.6
VHC1YBR235W EFB1P32471 206 aaKnown RBP5.08□□□□□ -1.6
VHC1YBR235W RIB7P33312 244 aa5.08□□□□□ -1.6
VHC1YBR235W PCH2P38126 564 aa5.08□□□□□ -1.6
VHC1YBR235W GCD10P41814 478 aa5.08□□□□□ -1.6
VHC1YBR235W MSN5P52918 1224 aa5.08□□□□□ -1.6
VHC1YBR235W TRK1P12685 1235 aa5.08□□□□□ -1.6
VHC1YBR235W VID28P40547 921 aa5.08□□□□□ -1.6
VHC1YBR235W ERB1Q04660 807 aaKnown RBP5.08□□□□□ -1.6
VHC1YBR235W YPQ2Q06328 317 aa5.08□□□□□ -1.6
VHC1YBR235W SAC3P46674 1301 aa5.07□□□□□ -1.6
VHC1YBR235W RRP43P25359 394 aaPredicted RBP5.07□□□□□ -1.6
VHC1YBR235W ARC19P33204 171 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W APD1P38281 316 aa5.07□□□□□ -1.6
VHC1YBR235W HXT13P39924 564 aa5.07□□□□□ -1.6
VHC1YBR235W DAS1P47005 663 aa5.07□□□□□ -1.6
VHC1YBR235W FAR11P53917 953 aa5.07□□□□□ -1.6
VHC1YBR235W MEH1Q02205 184 aa5.07□□□□□ -1.6
VHC1YBR235W MFM1Q02783 413 aa5.07□□□□□ -1.6
VHC1YBR235W FMP30Q02883 468 aa5.07□□□□□ -1.6
VHC1YBR235W SSQ1Q05931 657 aaPredicted RBP5.07□□□□□ -1.6
VHC1YBR235W JIP5Q06214 492 aaPredicted RBP5.07□□□□□ -1.6
VHC1YBR235W VAM6Q07468 1049 aa5.07□□□□□ -1.6
VHC1YBR235W YOR223WQ12015 292 aa5.07□□□□□ -1.6
VHC1YBR235W STE6P12866 1290 aa5.07□□□□□ -1.6
VHC1YBR235W PRP22P24384 1145 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W SLA2P33338 968 aa5.07□□□□□ -1.6
VHC1YBR235W PEX5P35056 612 aa5.07□□□□□ -1.6
VHC1YBR235W FAF1P40546 346 aaPredicted RBP5.07□□□□□ -1.6
VHC1YBR235W YNL058CP53947 316 aa5.07□□□□□ -1.6
VHC1YBR235W RSM28Q03430 361 aa5.07□□□□□ -1.6
VHC1YBR235W CSR1Q06705 408 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W SLK19Q08581 821 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
VHC1YBR235W RPO31P04051 1460 aa5.07□□□□□ -1.6
VHC1YBR235W HIS3P06633 220 aa5.07□□□□□ -1.6
VHC1YBR235W KEX1P09620 729 aa5.07□□□□□ -1.6
VHC1YBR235W MPE1P35728 441 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W KES1P35844 434 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W JJJ2P46997 583 aa5.07□□□□□ -1.6
VHC1YBR235W ECL1P48235 211 aa5.07□□□□□ -1.6
VHC1YBR235W RBL2P48606 106 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W ZDS1P50111 915 aaKnown RBP5.07□□□□□ -1.6
VHC1YBR235W ASI1P54074 624 aa5.07□□□□□ -1.6
VHC1YBR235W BUD7Q08754 746 aa5.07□□□□□ -1.6
VHC1YBR235W ARD1P07347 238 aaPredicted RBP5.06□□□□□ -1.6
VHC1YBR235W MRF1P30775 413 aaPredicted RBP5.06□□□□□ -1.6
VHC1YBR235W PDB1P32473 366 aaKnown RBP5.06□□□□□ -1.6
VHC1YBR235W TBS1P38114 1094 aa5.06□□□□□ -1.6
VHC1YBR235W NOP15P53927 220 aaPredicted RBP5.06□□□□□ -1.6
VHC1YBR235W RKM4Q12504 494 aa5.06□□□□□ -1.6
VHC1YBR235W BUD27P43573 796 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
VHC1YBR235W FYV8P46949 817 aaKnown RBP5.06□□□□□ -1.6
VHC1YBR235W VPS53P47061 822 aa5.06□□□□□ -1.6
VHC1YBR235W HXT17P53631 564 aa5.06□□□□□ -1.6
VHC1YBR235W MPC54Q08550 464 aa5.06□□□□□ -1.6
VHC1YBR235W TRL1P09880 827 aaKnown RBP5.05□□□□□ -1.6
VHC1YBR235W ADH4P10127 382 aa5.05□□□□□ -1.6
VHC1YBR235W PMR1P13586 950 aa5.05□□□□□ -1.6
VHC1YBR235W ATE1P16639 503 aa5.05□□□□□ -1.6
VHC1YBR235W TUP1P16649 713 aa5.05□□□□□ -1.6
VHC1YBR235W LOS1P33418 1100 aaPredicted RBP5.05□□□□□ -1.6
VHC1YBR235W CSE4P36012 229 aa5.05□□□□□ -1.6
VHC1YBR235W RPT2P40327 437 aaKnown RBP5.05□□□□□ -1.6
VHC1YBR235W VTC2P43585 828 aa5.05□□□□□ -1.6
VHC1YBR235W SAP155P43612 1002 aa5.05□□□□□ -1.6
VHC1YBR235W SRB7P47822 140 aa5.05□□□□□ -1.6
VHC1YBR235W MUB1Q03162 620 aa5.05□□□□□ -1.6
VHC1YBR235W FAR8Q05040 523 aa5.05□□□□□ -1.6
VHC1YBR235W ARR2Q06597 130 aa5.05□□□□□ -1.6
VHC1YBR235W CDC31P06704 161 aaKnown RBP5.05□□□□□ -1.6
VHC1YBR235W NUP120P35729 1037 aa5.05□□□□□ -1.6
VHC1YBR235W BOI1P38041 980 aaKnown RBP5.05□□□□□ -1.6
VHC1YBR235W PIH1P38768 344 aa5.05□□□□□ -1.6
VHC1YBR235W PET100P38958 111 aa5.05□□□□□ -1.6
VHC1YBR235W MET18P40469 1032 aa5.05□□□□□ -1.6
VHC1YBR235W INA22P40576 216 aa5.05□□□□□ -1.6
VHC1YBR235W MRX12P47084 519 aa5.05□□□□□ -1.6
VHC1YBR235W YGR266WP53326 701 aa5.05□□□□□ -1.6
VHC1YBR235W HAP1P0CE41 1502 aa5.05□□□□□ -1.6
VHC1YBR235W VAS1P07806 1104 aaKnown RBP5.05□□□□□ -1.6
VHC1YBR235W FUS1P11710 512 aa5.05□□□□□ -1.6
VHC1YBR235W KGD2P19262 463 aaPredicted RBP5.05□□□□□ -1.6
VHC1YBR235W CLB3P24870 427 aa5.05□□□□□ -1.6
VHC1YBR235W PAP1P29468 568 aaKnown RBP5.05□□□□□ -1.6
VHC1YBR235W SPC72P39723 622 aa5.05□□□□□ -1.6
VHC1YBR235W STB1P42845 420 aa5.05□□□□□ -1.6
VHC1YBR235W RIM21P48565 533 aa5.05□□□□□ -1.6
VHC1YBR235W RNR4P49723 345 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms