RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 ANKRD36BQ8N2N9 1353 aa9.65□□□□□ -0.86
RTTN-215ENST00000639487 KDRP35968 1356 aa9.65□□□□□ -0.86
RTTN-215ENST00000639487 TTC21AQ8NDW8 1320 aa9.65□□□□□ -0.87
RTTN-215ENST00000639487 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
RTTN-215ENST00000639487 RGPD2P0DJD1 1756 aa9.63□□□□□ -0.87
RTTN-215ENST00000639487 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
RTTN-215ENST00000639487 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
RTTN-215ENST00000639487 BRCA1P38398 1863 aaKnown RBP9.61□□□□□ -0.87
RTTN-215ENST00000639487 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
RTTN-215ENST00000639487 ZNF646O15015 1829 aaPredicted RBP9.6□□□□□ -0.87
RTTN-215ENST00000639487 RRP7BPQ9NSQ0 103 aa9.59□□□□□ -0.87
RTTN-215ENST00000639487 DOT1LQ8TEK3 1739 aa9.59□□□□□ -0.87
RTTN-215ENST00000639487 RGL2O15211 777 aa9.59□□□□□ -0.87
RTTN-215ENST00000639487 LTKP29376 864 aa9.59□□□□□ -0.87
RTTN-215ENST00000639487 FBXO41Q8TF61 875 aa9.59□□□□□ -0.87
RTTN-215ENST00000639487 EID1Q9Y6B2 187 aa9.59□□□□□ -0.87
RTTN-215ENST00000639487 MSH6P52701 1360 aa9.57□□□□□ -0.88
RTTN-215ENST00000639487 ARAP2Q8WZ64 1704 aa9.57□□□□□ -0.88
RTTN-215ENST00000639487 PSME4Q14997 1843 aa9.56□□□□□ -0.88
RTTN-215ENST00000639487 UBR3Q6ZT12 1888 aa9.56□□□□□ -0.88
RTTN-215ENST00000639487 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
RTTN-215ENST00000639487 TESK2Q96S53 571 aa9.55□□□□□ -0.88
RTTN-215ENST00000639487 BCL11AQ9H165 835 aa9.55□□□□□ -0.88
RTTN-215ENST00000639487 JCADQ9P266 1359 aa9.55□□□□□ -0.88
RTTN-215ENST00000639487 TONSLQ96HA7 1378 aa9.54□□□□□ -0.88
RTTN-215ENST00000639487 BTAF1O14981 1849 aa9.54□□□□□ -0.88
RTTN-215ENST00000639487 ARFGEF1Q9Y6D6 1849 aa9.53□□□□□ -0.88
RTTN-215ENST00000639487 PARD3Q8TEW0 1356 aa9.53□□□□□ -0.88
RTTN-215ENST00000639487 ZBTB22O15209 634 aa9.53□□□□□ -0.88
RTTN-215ENST00000639487 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
RTTN-215ENST00000639487 ZEB1P37275 1124 aaPredicted RBP9.52□□□□□ -0.89
RTTN-215ENST00000639487 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
RTTN-215ENST00000639487 C19orf44Q9H6X5 657 aa9.51□□□□□ -0.89
RTTN-215ENST00000639487 RIC1Q4ADV7 1423 aa9.51□□□□□ -0.89
RTTN-215ENST00000639487 SLC4A1APQ9BWU0 796 aaKnown RBP9.5□□□□□ -0.89
RTTN-215ENST00000639487 ADGRF5Q8IZF2 1346 aa9.5□□□□□ -0.89
RTTN-215ENST00000639487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.5□□□□□ -0.89
RTTN-215ENST00000639487 HNRNPUL2Q1KMD3 747 aaKnown RBP9.5□□□□□ -0.89
RTTN-215ENST00000639487 COL5A2P05997 1499 aaPredicted RBP9.49□□□□□ -0.89
RTTN-215ENST00000639487 HMGB2P26583 209 aaKnown RBP9.49□□□□□ -0.89
RTTN-215ENST00000639487 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
RTTN-215ENST00000639487 CADPS2Q86UW7 1296 aa9.48□□□□□ -0.89
RTTN-215ENST00000639487 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
RTTN-215ENST00000639487 TNS2Q63HR2 1409 aa9.47□□□□□ -0.89
RTTN-215ENST00000639487 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
RTTN-215ENST00000639487 FBXO31Q5XUX0 539 aaPredicted RBP9.47□□□□□ -0.89
RTTN-215ENST00000639487 MAP3K5Q99683 1374 aa9.47□□□□□ -0.89
RTTN-215ENST00000639487 CGNL1Q0VF96 1302 aa9.46□□□□□ -0.9
RTTN-215ENST00000639487 USP47Q96K76 1375 aa9.45□□□□□ -0.9
RTTN-215ENST00000639487 LTBP1Q14766 1721 aa9.45□□□□□ -0.9
RTTN-215ENST00000639487 CCDC7Q96M83 1385 aa9.44□□□□□ -0.9
RTTN-215ENST00000639487 SPATA31A3Q5VYP0 1347 aa9.44□□□□□ -0.9
RTTN-215ENST00000639487 BCL9LQ86UU0 1499 aa9.44□□□□□ -0.9
RTTN-215ENST00000639487 FAM50AQ14320 339 aaKnown RBP9.44□□□□□ -0.9
RTTN-215ENST00000639487 EIF5BO60841 1220 aaKnown RBP9.43□□□□□ -0.9
RTTN-215ENST00000639487 THRAP3Q9Y2W1 955 aaKnown RBP9.43□□□□□ -0.9
RTTN-215ENST00000639487 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
RTTN-215ENST00000639487 DICER1Q9UPY3 1922 aaKnown RBP9.42□□□□□ -0.9
RTTN-215ENST00000639487 MAP3K19Q56UN5 1328 aa9.42□□□□□ -0.9
RTTN-215ENST00000639487 CENPJQ9HC77 1338 aaPredicted RBP9.42□□□□□ -0.9
RTTN-215ENST00000639487 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
RTTN-215ENST00000639487 WASLO00401 505 aaPredicted RBP9.42□□□□□ -0.9
RTTN-215ENST00000639487 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
RTTN-215ENST00000639487 SOS1Q07889 1333 aaPredicted RBP9.41□□□□□ -0.9
RTTN-215ENST00000639487 TXNDC2Q86VQ3 553 aa9.41□□□□□ -0.9
RTTN-215ENST00000639487 FNBP4Q8N3X1 1017 aaPredicted RBP9.41□□□□□ -0.9
RTTN-215ENST00000639487 NSD3Q9BZ95 1437 aa9.41□□□□□ -0.9
RTTN-215ENST00000639487 EVC2Q86UK5 1308 aa9.4□□□□□ -0.9
RTTN-215ENST00000639487 KCPQ6ZWJ8 1503 aa9.39□□□□□ -0.91
RTTN-215ENST00000639487 NPHP3Q7Z494 1330 aa9.39□□□□□ -0.91
RTTN-215ENST00000639487 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
RTTN-215ENST00000639487 PLEKHH1Q9ULM0 1364 aa9.38□□□□□ -0.91
RTTN-215ENST00000639487 GGT6Q6P531 493 aa9.38□□□□□ -0.91
RTTN-215ENST00000639487 NCKAP5LQ9HCH0 1330 aa9.37□□□□□ -0.91
RTTN-215ENST00000639487 A0A1W2PP64 1363 aa9.37□□□□□ -0.91
RTTN-215ENST00000639487 THSD7BQ9C0I4 1608 aa9.37□□□□□ -0.91
RTTN-215ENST00000639487 ZNF609O15014 1411 aa9.37□□□□□ -0.91
RTTN-215ENST00000639487 BABAM1Q9NWV8 329 aa9.36□□□□□ -0.91
RTTN-215ENST00000639487 CRB1P82279 1406 aa9.36□□□□□ -0.91
RTTN-215ENST00000639487 ECM29Q5VYK3 1845 aa9.36□□□□□ -0.91
RTTN-215ENST00000639487 PRR36Q9H6K5 1346 aa9.36□□□□□ -0.91
RTTN-215ENST00000639487 CEMIPQ8WUJ3 1361 aa9.36□□□□□ -0.91
RTTN-215ENST00000639487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
RTTN-215ENST00000639487 DISP3Q9P2K9 1392 aa9.35□□□□□ -0.91
RTTN-215ENST00000639487 L3MBTL2Q969R5 705 aa9.35□□□□□ -0.91
RTTN-215ENST00000639487 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
RTTN-215ENST00000639487 PPARGC1BQ86YN6 1023 aaKnown RBP9.35□□□□□ -0.91
RTTN-215ENST00000639487 AMOTL2Q9Y2J4 779 aa9.35□□□□□ -0.91
RTTN-215ENST00000639487 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
RTTN-215ENST00000639487 MYH3P11055 1940 aa9.34□□□□□ -0.91
RTTN-215ENST00000639487 TTC21BQ7Z4L5 1316 aa9.34□□□□□ -0.91
RTTN-215ENST00000639487 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
RTTN-215ENST00000639487 ERBB3P21860 1342 aa9.33□□□□□ -0.92
RTTN-215ENST00000639487 PAPPA2Q9BXP8 1791 aa9.33□□□□□ -0.92
RTTN-215ENST00000639487 PER1O15534 1290 aaPredicted RBP9.32□□□□□ -0.92
RTTN-215ENST00000639487 TOM1O60784 492 aa9.32□□□□□ -0.92
RTTN-215ENST00000639487 BRINP3Q76B58 766 aa9.32□□□□□ -0.92
RTTN-215ENST00000639487 MAST2Q6P0Q8 1798 aa9.31□□□□□ -0.92
RTTN-215ENST00000639487 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
RTTN-215ENST00000639487 PSME1Q06323 249 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms