RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 CBFA2T2O43439 604 aa12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 ANKRD62A6NC57 917 aa12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 VGLL3A8MV65 326 aa12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
KCNMA1-259ENST00000639406 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
KCNMA1-259ENST00000639406 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
KCNMA1-259ENST00000639406 MAP2K1Q02750 393 aaPredicted RBP12.94□□□□□ -0.34
KCNMA1-259ENST00000639406 TTC31Q49AM3 519 aaPredicted RBP12.94□□□□□ -0.34
KCNMA1-259ENST00000639406 CCDC91Q7Z6B0 441 aa12.94□□□□□ -0.34
KCNMA1-259ENST00000639406 NEK4P51957 841 aa12.94□□□□□ -0.34
KCNMA1-259ENST00000639406 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 CADPSQ9ULU8 1353 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 G3V3G9 751 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 ELL2O00472 640 aaPredicted RBP12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 IVLP07476 585 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 SARNPP82979 210 aaKnown RBP12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 KIAA1328Q86T90 577 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 EPS15P42566 896 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 LRRFIP2Q9Y608 721 aaKnown RBP12.93□□□□□ -0.34
KCNMA1-259ENST00000639406 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 ZNHIT6Q9NWK9 470 aaKnown RBP12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 CASQ1P31415 396 aa12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 VPS8Q8N3P4 1428 aa12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 APAF1O14727 1248 aa12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 WDR33Q9C0J8 1336 aaKnown RBP12.92□□□□□ -0.34
KCNMA1-259ENST00000639406 JAKMIP3Q5VZ66 844 aa12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 CUX2O14529 1486 aa12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 CCDC148Q8NFR7 591 aa12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 GGT6Q6P531 493 aa12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 MAGEC2Q9UBF1 373 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 PANK3Q9H999 370 aa12.91□□□□□ -0.34
KCNMA1-259ENST00000639406 MCM3P25205 808 aa12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 RASSF4Q9H2L5 321 aa12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 URI1O94763 535 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 KANK4Q5T7N3 995 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 EZRP15311 586 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 PDCP20941 246 aa12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 PSMA5P28066 241 aa12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 NFXL1Q6ZNB6 911 aa12.9□□□□□ -0.34
KCNMA1-259ENST00000639406 ROCK1Q13464 1354 aa12.9□□□□□ -0.35
KCNMA1-259ENST00000639406 C16orf45Q96MC5 204 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 LUZP1Q86V48 1076 aa12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.355e-14■■■■■ 211.5
KCNMA1-259ENST00000639406 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
KCNMA1-259ENST00000639406 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 API5Q9BZZ5 524 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 SPATA24Q86W54 205 aa12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 ATAD2BQ9ULI0 1458 aa12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
KCNMA1-259ENST00000639406 TRDNQ13061 729 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 TMCO5BA8MYB1 307 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 C10orf67Q8IYJ2 551 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 CEP57L1Q8IYX8 460 aa12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-259ENST00000639406 PAXBP1Q9Y5B6 917 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 KIF20AO95235 890 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 KRT85P78386 507 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 STK38Q15208 465 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 CEP63Q96MT8 703 aa12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 LUC7LQ9NQ29 371 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-259ENST00000639406 A0A1B0GUL7 405 aa12.85□□□□□ -0.35
KCNMA1-259ENST00000639406 IGSF3O75054 1194 aa12.85□□□□□ -0.35
KCNMA1-259ENST00000639406 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
KCNMA1-259ENST00000639406 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-259ENST00000639406 WDR66Q8TBY9 1149 aa12.85□□□□□ -0.35
KCNMA1-259ENST00000639406 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
KCNMA1-259ENST00000639406 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 SMTNL1A8MU46 457 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms