RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 PUS7Q96PZ0 661 aaKnown RBP25.33■■□□□ 1.65
SPIN3-220ENST00000639257 CABP1Q9NZU7 370 aa25.33■■□□□ 1.65
SPIN3-220ENST00000639257 BCL9LQ86UU0 1499 aa25.33■■□□□ 1.65
SPIN3-220ENST00000639257 USP6P35125 1406 aa25.32■■□□□ 1.64
SPIN3-220ENST00000639257 NGLY1Q96IV0 654 aa25.32■■□□□ 1.64
SPIN3-220ENST00000639257 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.32■■□□□ 1.64
SPIN3-220ENST00000639257 CPSF1Q10570 1443 aaKnown RBP25.31■■□□□ 1.64
SPIN3-220ENST00000639257 CABLES1Q8TDN4 633 aa25.31■■□□□ 1.64
SPIN3-220ENST00000639257 CDK12Q9NYV4 1490 aaPredicted RBP25.31■■□□□ 1.64
SPIN3-220ENST00000639257 AKAP12Q02952 1782 aa25.3■■□□□ 1.64
SPIN3-220ENST00000639257 USP47Q96K76 1375 aa25.3■■□□□ 1.64
SPIN3-220ENST00000639257 ST20-MTHFSA0A0A6YYL1 179 aa25.29■■□□□ 1.64
SPIN3-220ENST00000639257 ATRNO75882 1429 aa25.29■■□□□ 1.64
SPIN3-220ENST00000639257 LMOD2Q6P5Q4 547 aa25.28■■□□□ 1.64
SPIN3-220ENST00000639257 PHRF1Q9P1Y6 1649 aaKnown RBP25.27■■□□□ 1.64
SPIN3-220ENST00000639257 CD163L1Q9NR16 1453 aa25.27■■□□□ 1.64
SPIN3-220ENST00000639257 NRKQ7Z2Y5 1582 aa25.27■■□□□ 1.64
SPIN3-220ENST00000639257 NWD2Q9ULI1 1742 aa25.26■■□□□ 1.63
SPIN3-220ENST00000639257 SLC24A1O60721 1099 aa25.26■■□□□ 1.63
SPIN3-220ENST00000639257 USP21Q9UK80 565 aa25.26■■□□□ 1.63
SPIN3-220ENST00000639257 PAK3O75914 559 aaPredicted RBP25.25■■□□□ 1.63
SPIN3-220ENST00000639257 USP19O94966 1318 aa25.25■■□□□ 1.63
SPIN3-220ENST00000639257 PLCH1Q4KWH8 1693 aa25.25■■□□□ 1.63
SPIN3-220ENST00000639257 QTRT2Q9H974 415 aaKnown RBP25.24■■□□□ 1.63
SPIN3-220ENST00000639257 MON2Q7Z3U7 1717 aa25.23■■□□□ 1.63
SPIN3-220ENST00000639257 RXRBP28702 533 aa25.23■■□□□ 1.63
SPIN3-220ENST00000639257 ZNF692Q9BU19 519 aaPredicted RBP25.23■■□□□ 1.63
SPIN3-220ENST00000639257 RBM6P78332 1123 aaKnown RBP25.22■■□□□ 1.63
SPIN3-220ENST00000639257 TRPC5Q9UL62 973 aaPredicted RBP25.22■■□□□ 1.63
SPIN3-220ENST00000639257 COL14A1Q05707 1796 aaKnown RBP25.21■■□□□ 1.63
SPIN3-220ENST00000639257 PIK3C2AO00443 1686 aa25.21■■□□□ 1.63
SPIN3-220ENST00000639257 NRAPQ86VF7 1730 aa25.2■■□□□ 1.63
SPIN3-220ENST00000639257 UNC5CLQ8IV45 518 aa25.2■■□□□ 1.62
SPIN3-220ENST00000639257 SLIT3O75094 1523 aa25.19■■□□□ 1.62
SPIN3-220ENST00000639257 FAM83GA6ND36 823 aa25.19■■□□□ 1.62
SPIN3-220ENST00000639257 HAP1P54257 671 aaPredicted RBP25.19■■□□□ 1.62
SPIN3-220ENST00000639257 ABTB2Q8N961 1025 aa25.19■■□□□ 1.62
SPIN3-220ENST00000639257 NINLQ9Y2I6 1382 aa25.18■■□□□ 1.62
SPIN3-220ENST00000639257 RGS12O14924 1447 aa25.18■■□□□ 1.62
SPIN3-220ENST00000639257 CPDO75976 1380 aa25.17■■□□□ 1.62
SPIN3-220ENST00000639257 TTC21BQ7Z4L5 1316 aa25.16■■□□□ 1.62
SPIN3-220ENST00000639257 USP54Q70EL1 1684 aa25.16■■□□□ 1.62
SPIN3-220ENST00000639257 TTC21AQ8NDW8 1320 aa25.15■■□□□ 1.62
SPIN3-220ENST00000639257 GLI3P10071 1580 aa25.15■■□□□ 1.62
SPIN3-220ENST00000639257 NLRP13Q86W25 1043 aa25.15■■□□□ 1.62
SPIN3-220ENST00000639257 KTN1Q86UP2 1357 aaKnown RBP25.15■■□□□ 1.62
SPIN3-220ENST00000639257 NUTM2GQ5VZR2 741 aa25.14■■□□□ 1.62
SPIN3-220ENST00000639257 SLC12A5Q9H2X9 1139 aa25.14■■□□□ 1.62
SPIN3-220ENST00000639257 KIAA0232Q92628 1395 aa25.14■■□□□ 1.61
SPIN3-220ENST00000639257 PLEKHG5O94827 1062 aa25.12■■□□□ 1.61
SPIN3-220ENST00000639257 TMF1P82094 1093 aa25.12■■□□□ 1.61
SPIN3-220ENST00000639257 VPS72Q15906 364 aa25.12■■□□□ 1.61
SPIN3-220ENST00000639257 GJD4Q96KN9 370 aaPredicted RBP25.12■■□□□ 1.61
SPIN3-220ENST00000639257 A0A1W2PP64 1363 aa25.12■■□□□ 1.61
SPIN3-220ENST00000639257 LMO7Q8WWI1 1683 aa25.12■■□□□ 1.61
SPIN3-220ENST00000639257 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
SPIN3-220ENST00000639257 USP31Q70CQ4 1352 aa25.1■■□□□ 1.61
SPIN3-220ENST00000639257 GCP02774 474 aa25.1■■□□□ 1.61
SPIN3-220ENST00000639257 PRDM11Q9NQV5 511 aa25.09■■□□□ 1.61
SPIN3-220ENST00000639257 NLRP6P59044 892 aa25.08■■□□□ 1.61
SPIN3-220ENST00000639257 BTG4Q9NY30 223 aa25.08■■□□□ 1.61
SPIN3-220ENST00000639257 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
SPIN3-220ENST00000639257 TERF2IPQ9NYB0 399 aa25.07■■□□□ 1.6
SPIN3-220ENST00000639257 HDGFL2Q7Z4V5 671 aaPredicted RBP25.06■■□□□ 1.6
SPIN3-220ENST00000639257 ANKRD36BQ8N2N9 1353 aa25.05■■□□□ 1.6
SPIN3-220ENST00000639257 MYOM1P52179 1685 aa25.05■■□□□ 1.6
SPIN3-220ENST00000639257 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
SPIN3-220ENST00000639257 ONECUT3O60422 494 aaPredicted RBP25.05■■□□□ 1.6
SPIN3-220ENST00000639257 ZC3H6P61129 1189 aaKnown RBP25.05■■□□□ 1.6
SPIN3-220ENST00000639257 CDCA8Q53HL2 280 aa25.05■■□□□ 1.6
SPIN3-220ENST00000639257 NFAT5O94916 1531 aa25.05■■□□□ 1.6
SPIN3-220ENST00000639257 COL18A1P39060 1754 aa25.04■■□□□ 1.6
SPIN3-220ENST00000639257 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
SPIN3-220ENST00000639257 CHRNA2Q15822 529 aa25.02■■□□□ 1.6
SPIN3-220ENST00000639257 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
SPIN3-220ENST00000639257 OVOS2A0A0J9YW53 1432 aa25.02■■□□□ 1.6
SPIN3-220ENST00000639257 OVOS2Q6IE36 1432 aa25.02■■□□□ 1.6
SPIN3-220ENST00000639257 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
SPIN3-220ENST00000639257 SPATA31A5Q5VU36 1347 aa25■■□□□ 1.59
SPIN3-220ENST00000639257 SPATA31A7Q8IWB4 1347 aa25■■□□□ 1.59
SPIN3-220ENST00000639257 ABCC6O95255 1503 aa24.99■■□□□ 1.59
SPIN3-220ENST00000639257 HSPA5P11021 654 aaKnown RBP24.99■■□□□ 1.59
SPIN3-220ENST00000639257 NME9Q86XW9 330 aa24.99■■□□□ 1.59
SPIN3-220ENST00000639257 COL5A2P05997 1499 aaPredicted RBP24.98■■□□□ 1.59
SPIN3-220ENST00000639257 ARHGEF25Q86VW2 580 aa24.98■■□□□ 1.59
SPIN3-220ENST00000639257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.98■■□□□ 1.59
SPIN3-220ENST00000639257 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
SPIN3-220ENST00000639257 THSD7AQ9UPZ6 1657 aa24.97■■□□□ 1.59
SPIN3-220ENST00000639257 SPATA31A1Q5TZJ5 1347 aa24.95■■□□□ 1.58
SPIN3-220ENST00000639257 BRWD3Q6RI45 1802 aa24.94■■□□□ 1.58
SPIN3-220ENST00000639257 UPF1Q92900 1129 aaKnown RBP eCLIP24.94■■□□□ 1.58
SPIN3-220ENST00000639257 SEPT12Q8IYM1 358 aa24.91■■□□□ 1.58
SPIN3-220ENST00000639257 AXIN2Q9Y2T1 843 aa24.9■■□□□ 1.58
SPIN3-220ENST00000639257 CCDC9Q9Y3X0 531 aaKnown RBP24.9■■□□□ 1.58
SPIN3-220ENST00000639257 LARP1Q6PKG0 1096 aaKnown RBP24.89■■□□□ 1.58
SPIN3-220ENST00000639257 CARD14Q9BXL6 1004 aa24.89■■□□□ 1.58
SPIN3-220ENST00000639257 STRN4Q9NRL3 753 aa24.88■■□□□ 1.57
SPIN3-220ENST00000639257 EP400Q96L91 3159 aa24.88■■□□□ 1.57
SPIN3-220ENST00000639257 LTN1O94822 1766 aa24.88■■□□□ 1.57
SPIN3-220ENST00000639257 CRB1P82279 1406 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms