RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 MMP16P51512 607 aa13.6□□□□□ -0.23
CCDC7-212ENST00000639041 TJAP1Q5JTD0 557 aa13.59□□□□□ -0.23
CCDC7-212ENST00000639041 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
CCDC7-212ENST00000639041 ALG2Q9H553 416 aa13.59□□□□□ -0.23
CCDC7-212ENST00000639041 FBXO45P0C2W1 286 aa13.58□□□□□ -0.24
CCDC7-212ENST00000639041 IL21Q9HBE4 155 aa13.58□□□□□ -0.24
CCDC7-212ENST00000639041 EVA1BQ9NVM1 165 aa13.58□□□□□ -0.24
CCDC7-212ENST00000639041 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
CCDC7-212ENST00000639041 RFX1P22670 979 aa13.57□□□□□ -0.24
CCDC7-212ENST00000639041 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
CCDC7-212ENST00000639041 MMRN1Q13201 1228 aa13.57□□□□□ -0.24
CCDC7-212ENST00000639041 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
CCDC7-212ENST00000639041 NKX2-3Q8TAU0 364 aa13.57□□□□□ -0.24
CCDC7-212ENST00000639041 NR1H3Q13133 447 aa13.56□□□□□ -0.24
CCDC7-212ENST00000639041 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
CCDC7-212ENST00000639041 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
CCDC7-212ENST00000639041 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC7-212ENST00000639041 PTCRAQ6ISU1 281 aaPredicted RBP13.53□□□□□ -0.24
CCDC7-212ENST00000639041 PPP1R12CQ9BZL4 782 aa13.52□□□□□ -0.25
CCDC7-212ENST00000639041 S1PR4O95977 384 aa13.51□□□□□ -0.25
CCDC7-212ENST00000639041 SOX11P35716 441 aa13.51□□□□□ -0.25
CCDC7-212ENST00000639041 UCN2Q96RP3 112 aa13.51□□□□□ -0.25
CCDC7-212ENST00000639041 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
CCDC7-212ENST00000639041 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
CCDC7-212ENST00000639041 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
CCDC7-212ENST00000639041 CFAP70Q5T0N1 1121 aa13.49□□□□□ -0.25
CCDC7-212ENST00000639041 ARMC2Q8NEN0 867 aa13.49□□□□□ -0.25
CCDC7-212ENST00000639041 UNC93B1Q9H1C4 597 aa13.49□□□□□ -0.25
CCDC7-212ENST00000639041 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.47□□□□□ -0.25
CCDC7-212ENST00000639041 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
CCDC7-212ENST00000639041 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
CCDC7-212ENST00000639041 PTK2Q05397 1052 aa13.46□□□□□ -0.25
CCDC7-212ENST00000639041 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.25
CCDC7-212ENST00000639041 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
CCDC7-212ENST00000639041 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
CCDC7-212ENST00000639041 OCSTAMPQ9BR26 566 aa13.45□□□□□ -0.26
CCDC7-212ENST00000639041 FCF1Q9Y324 198 aaKnown RBP13.45□□□□□ -0.26
CCDC7-212ENST00000639041 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
CCDC7-212ENST00000639041 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
CCDC7-212ENST00000639041 PCDHB9Q9Y5E1 797 aa13.44□□□□□ -0.26
CCDC7-212ENST00000639041 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
CCDC7-212ENST00000639041 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
CCDC7-212ENST00000639041 LINC01559Q495D7 138 aa13.43□□□□□ -0.26
CCDC7-212ENST00000639041 RETREG2Q8NC44 543 aa13.43□□□□□ -0.26
CCDC7-212ENST00000639041 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
CCDC7-212ENST00000639041 BAP1Q92560 729 aa13.42□□□□□ -0.26
CCDC7-212ENST00000639041 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.26
CCDC7-212ENST00000639041 PBXIP1Q96AQ6 731 aa13.42□□□□□ -0.26
CCDC7-212ENST00000639041 ARHGAP9Q9BRR9 750 aa13.42□□□□□ -0.26
CCDC7-212ENST00000639041 ADAM32Q8TC27 787 aa13.41□□□□□ -0.26
CCDC7-212ENST00000639041 CARD14Q9BXL6 1004 aa13.41□□□□□ -0.26
CCDC7-212ENST00000639041 GPSM3Q9Y4H4 160 aa13.41□□□□□ -0.26
CCDC7-212ENST00000639041 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
CCDC7-212ENST00000639041 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
CCDC7-212ENST00000639041 RNF166Q96A37 237 aaPredicted RBP13.4□□□□□ -0.26
CCDC7-212ENST00000639041 MAGEB6P1A0A0J9YX57 407 aa13.39□□□□□ -0.27
CCDC7-212ENST00000639041 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
CCDC7-212ENST00000639041 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
CCDC7-212ENST00000639041 AGERQ15109 404 aa13.38□□□□□ -0.27
CCDC7-212ENST00000639041 ATP9BO43861 1147 aa13.37□□□□□ -0.27
CCDC7-212ENST00000639041 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
CCDC7-212ENST00000639041 KCNC4Q03721 635 aa13.37□□□□□ -0.27
CCDC7-212ENST00000639041 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
CCDC7-212ENST00000639041 FOXJ1Q92949 421 aa13.37□□□□□ -0.27
CCDC7-212ENST00000639041 CEP126Q9P2H0 1117 aa13.37□□□□□ -0.27
CCDC7-212ENST00000639041 SKIP12755 728 aa13.36□□□□□ -0.27
CCDC7-212ENST00000639041 FAM174AQ8TBP5 190 aa13.36□□□□□ -0.27
CCDC7-212ENST00000639041 DEPDC4Q8N2C3 294 aa13.34□□□□□ -0.27
CCDC7-212ENST00000639041 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
CCDC7-212ENST00000639041 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
CCDC7-212ENST00000639041 ZNF511Q8NB15 262 aa13.33□□□□□ -0.28
CCDC7-212ENST00000639041 RNF223E7ERA6 249 aa13.32□□□□□ -0.28
CCDC7-212ENST00000639041 C4orf48Q5BLP8 95 aa13.31□□□□□ -0.28
CCDC7-212ENST00000639041 BPHLQ86WA6 291 aaPredicted RBP13.31□□□□□ -0.28
CCDC7-212ENST00000639041 RNF135Q8IUD6 432 aa13.31□□□□□ -0.28
CCDC7-212ENST00000639041 CARNS1A5YM72 827 aa13.3□□□□□ -0.28
CCDC7-212ENST00000639041 ITGBL1O95965 494 aaPredicted RBP13.3□□□□□ -0.28
CCDC7-212ENST00000639041 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
CCDC7-212ENST00000639041 TRAIPQ9BWF2 469 aa13.3□□□□□ -0.28
CCDC7-212ENST00000639041 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 USP17L5A8MUK1 530 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 ZBTB24O43167 697 aaPredicted RBP13.29□□□□□ -0.28
CCDC7-212ENST00000639041 ERFEQ4G0M1 354 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 PLA2G2CQ5R387 149 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 USP17L2Q6R6M4 530 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 VRTNQ9H8Y1 702 aa13.29□□□□□ -0.28
CCDC7-212ENST00000639041 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
CCDC7-212ENST00000639041 SH3BP2P78314 561 aa13.28□□□□□ -0.28
CCDC7-212ENST00000639041 TSGA10IPQ3SY00 556 aa13.28□□□□□ -0.28
CCDC7-212ENST00000639041 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
CCDC7-212ENST00000639041 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
CCDC7-212ENST00000639041 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
CCDC7-212ENST00000639041 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.29
CCDC7-212ENST00000639041 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
CCDC7-212ENST00000639041 ZNF592Q92610 1267 aa13.27□□□□□ -0.29
CCDC7-212ENST00000639041 PPP1R18Q6NYC8 613 aa13.26□□□□□ -0.29
CCDC7-212ENST00000639041 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
CCDC7-212ENST00000639041 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms