RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 NWD1Q149M9 1564 aa28.83■■■□□ 2.21
SCARB2-212ENST00000638663 TTC21BQ7Z4L5 1316 aa28.83■■■□□ 2.21
SCARB2-212ENST00000638663 SUPT16HQ9Y5B9 1047 aaKnown RBP28.82■■■□□ 2.2
SCARB2-212ENST00000638663 NRKQ7Z2Y5 1582 aa28.82■■■□□ 2.2
SCARB2-212ENST00000638663 ADGRL3Q9HAR2 1447 aa28.82■■■□□ 2.2
SCARB2-212ENST00000638663 NUDCQ9Y266 331 aa28.82■■■□□ 2.2
SCARB2-212ENST00000638663 NGDNQ8NEJ9 315 aaKnown RBP28.81■■■□□ 2.2
SCARB2-212ENST00000638663 COG3Q96JB2 828 aa28.81■■■□□ 2.2
SCARB2-212ENST00000638663 FBLN1P23142 703 aa28.81■■■□□ 2.2
SCARB2-212ENST00000638663 C14orf37Q86TY3 774 aa28.79■■■□□ 2.2
SCARB2-212ENST00000638663 PDE3BQ13370 1112 aa28.77■■■□□ 2.2
SCARB2-212ENST00000638663 PROSER2Q86WR7 435 aaPredicted RBP28.77■■■□□ 2.2
SCARB2-212ENST00000638663 POLKQ9UBT6 870 aa28.77■■■□□ 2.2
SCARB2-212ENST00000638663 COL3A1P02461 1466 aaPredicted RBP28.76■■■□□ 2.2
SCARB2-212ENST00000638663 SSH2Q76I76 1423 aa28.76■■■□□ 2.19
SCARB2-212ENST00000638663 NEFLP07196 543 aa28.76■■■□□ 2.19
SCARB2-212ENST00000638663 LMTK3Q96Q04 1460 aa28.75■■■□□ 2.19
SCARB2-212ENST00000638663 APAF1O14727 1248 aa28.75■■■□□ 2.19
SCARB2-212ENST00000638663 FKBP8Q14318 412 aa28.75■■■□□ 2.19
SCARB2-212ENST00000638663 PPM1GO15355 546 aaPredicted RBP28.74■■■□□ 2.19
SCARB2-212ENST00000638663 U2AF1L5P0DN76 240 aaPredicted RBP28.73■■■□□ 2.19
SCARB2-212ENST00000638663 U2AF1Q01081 240 aaKnown RBP eCLIP28.73■■■□□ 2.19
SCARB2-212ENST00000638663 PNPLA6Q8IY17 1366 aa28.72■■■□□ 2.19
SCARB2-212ENST00000638663 CDCA7LQ96GN5 454 aa28.72■■■□□ 2.19
SCARB2-212ENST00000638663 AATKQ6ZMQ8 1374 aa28.72■■■□□ 2.19
SCARB2-212ENST00000638663 MAP2P11137 1827 aaKnown RBP28.72■■■□□ 2.19
SCARB2-212ENST00000638663 EMILIN1Q9Y6C2 1016 aa28.71■■■□□ 2.19
SCARB2-212ENST00000638663 TTC21AQ8NDW8 1320 aa28.71■■■□□ 2.19
SCARB2-212ENST00000638663 OVOS2A0A0J9YW53 1432 aa28.69■■■□□ 2.18
SCARB2-212ENST00000638663 OVOS2Q6IE36 1432 aa28.69■■■□□ 2.18
SCARB2-212ENST00000638663 U2SURPO15042 1029 aaKnown RBP28.69■■■□□ 2.18
SCARB2-212ENST00000638663 DIAPH1O60610 1272 aaKnown RBP28.69■■■□□ 2.18
SCARB2-212ENST00000638663 PHF8Q9UPP1 1060 aa28.69■■■□□ 2.18
SCARB2-212ENST00000638663 RUNDC1Q96C34 613 aa28.69■■■□□ 2.18
SCARB2-212ENST00000638663 RRS1Q15050 365 aaKnown RBP28.67■■■□□ 2.18
SCARB2-212ENST00000638663 ZNF521Q96K83 1311 aa28.67■■■□□ 2.18
SCARB2-212ENST00000638663 ESCO1Q5FWF5 840 aa28.65■■■□□ 2.18
SCARB2-212ENST00000638663 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
SCARB2-212ENST00000638663 CDK12Q9NYV4 1490 aaPredicted RBP28.63■■■□□ 2.17
SCARB2-212ENST00000638663 TCP11L2Q8N4U5 519 aa28.62■■■□□ 2.17
SCARB2-212ENST00000638663 STRCQ7RTU9 1775 aa28.62■■■□□ 2.17
SCARB2-212ENST00000638663 NGEFQ8N5V2 710 aa28.61■■■□□ 2.17
SCARB2-212ENST00000638663 C19orf44Q9H6X5 657 aa28.61■■■□□ 2.17
SCARB2-212ENST00000638663 TMEM94Q12767 1356 aa28.61■■■□□ 2.17
SCARB2-212ENST00000638663 USP31Q70CQ4 1352 aa28.61■■■□□ 2.17
SCARB2-212ENST00000638663 IRX6P78412 446 aaPredicted RBP28.61■■■□□ 2.17
SCARB2-212ENST00000638663 IQSEC2Q5JU85 1478 aa28.6■■■□□ 2.17
SCARB2-212ENST00000638663 PIK3C2AO00443 1686 aa28.6■■■□□ 2.17
SCARB2-212ENST00000638663 GOLGA2Q08379 1002 aa28.6■■■□□ 2.17
SCARB2-212ENST00000638663 RRP7AQ9Y3A4 280 aaKnown RBP28.59■■■□□ 2.17
SCARB2-212ENST00000638663 SOX12O15370 315 aa28.59■■■□□ 2.17
SCARB2-212ENST00000638663 PAK3O75914 559 aaPredicted RBP28.59■■■□□ 2.17
SCARB2-212ENST00000638663 NEUROD2Q15784 382 aa28.59■■■□□ 2.17
SCARB2-212ENST00000638663 ORAI2Q96SN7 254 aa28.58■■■□□ 2.17
SCARB2-212ENST00000638663 NLRP6P59044 892 aa28.57■■■□□ 2.16
SCARB2-212ENST00000638663 PLEKHF1Q96S99 279 aa28.56■■■□□ 2.16
SCARB2-212ENST00000638663 NUTM2GQ5VZR2 741 aa28.55■■■□□ 2.16
SCARB2-212ENST00000638663 IL13P35225 146 aa28.55■■■□□ 2.16
SCARB2-212ENST00000638663 PSME1Q06323 249 aa28.55■■■□□ 2.16
SCARB2-212ENST00000638663 ABTB2Q8N961 1025 aa28.55■■■□□ 2.16
SCARB2-212ENST00000638663 WWC1Q8IX03 1113 aa28.54■■■□□ 2.16
SCARB2-212ENST00000638663 NCOA3Q9Y6Q9 1424 aa28.53■■■□□ 2.16
SCARB2-212ENST00000638663 SLFN5Q08AF3 891 aa28.53■■■□□ 2.16
SCARB2-212ENST00000638663 C1orf167Q5SNV9 1468 aa28.52■■■□□ 2.16
SCARB2-212ENST00000638663 ATF3P18847 181 aa28.52■■■□□ 2.16
SCARB2-212ENST00000638663 DUSP27Q5VZP5 1158 aa28.52■■■□□ 2.16
SCARB2-212ENST00000638663 RCAN3Q9UKA8 241 aa28.52■■■□□ 2.16
SCARB2-212ENST00000638663 MAPK8IP3Q9UPT6 1336 aa28.51■■■□□ 2.16
SCARB2-212ENST00000638663 DMRT2Q9Y5R5 561 aa28.51■■■□□ 2.16
SCARB2-212ENST00000638663 SPINK5Q9NQ38 1064 aaPredicted RBP28.51■■■□□ 2.15
SCARB2-212ENST00000638663 RNF123Q5XPI4 1314 aa28.5■■■□□ 2.15
SCARB2-212ENST00000638663 FOXO3O43524 673 aa28.5■■■□□ 2.15
SCARB2-212ENST00000638663 FCHSD2O94868 740 aa28.5■■■□□ 2.15
SCARB2-212ENST00000638663 PNNQ9H307 717 aaKnown RBP28.5■■■□□ 2.15
SCARB2-212ENST00000638663 MAP3K19Q56UN5 1328 aa28.49■■■□□ 2.15
SCARB2-212ENST00000638663 PEAK1Q9H792 1746 aa28.49■■■□□ 2.15
SCARB2-212ENST00000638663 HMOX1P09601 288 aa28.48■■■□□ 2.15
SCARB2-212ENST00000638663 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
SCARB2-212ENST00000638663 RSPH6AQ9H0K4 717 aa28.48■■■□□ 2.15
SCARB2-212ENST00000638663 LRRC7Q96NW7 1537 aa28.48■■■□□ 2.15
SCARB2-212ENST00000638663 MARF1Q9Y4F3 1742 aaKnown RBP28.48■■■□□ 2.15
SCARB2-212ENST00000638663 DCCP43146 1447 aa28.48■■■□□ 2.15
SCARB2-212ENST00000638663 E9PSI1 815 aa28.47■■■□□ 2.15
SCARB2-212ENST00000638663 XPCQ01831 940 aaPredicted RBP28.47■■■□□ 2.15
SCARB2-212ENST00000638663 CCDC27Q2M243 656 aa28.47■■■□□ 2.15
SCARB2-212ENST00000638663 TRMT2AQ8IZ69 625 aaKnown RBP28.47■■■□□ 2.15
SCARB2-212ENST00000638663 USP54Q70EL1 1684 aa28.47■■■□□ 2.15
SCARB2-212ENST00000638663 MST1RQ04912 1400 aa28.46■■■□□ 2.15
SCARB2-212ENST00000638663 PRKAR2BP31323 418 aa28.46■■■□□ 2.15
SCARB2-212ENST00000638663 HSP90AB2PQ58FF8 381 aa28.46■■■□□ 2.15
SCARB2-212ENST00000638663 EIF4A2Q14240 407 aaKnown RBP28.45■■■□□ 2.15
SCARB2-212ENST00000638663 NCBP3Q53F19 620 aaKnown RBP28.45■■■□□ 2.15
SCARB2-212ENST00000638663 TMPOP42166 694 aaKnown RBP28.45■■■□□ 2.14
SCARB2-212ENST00000638663 ZNF335Q9H4Z2 1342 aaPredicted RBP28.44■■■□□ 2.14
SCARB2-212ENST00000638663 KIF1AQ12756 1690 aa28.43■■■□□ 2.14
SCARB2-212ENST00000638663 SBNO1A3KN83 1393 aa28.43■■■□□ 2.14
SCARB2-212ENST00000638663 MSH6P52701 1360 aa28.43■■■□□ 2.14
SCARB2-212ENST00000638663 CADPS2Q86UW7 1296 aa28.43■■■□□ 2.14
SCARB2-212ENST00000638663 AMPHP49418 695 aa28.41■■■□□ 2.14
SCARB2-212ENST00000638663 WDR63Q8IWG1 891 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms