RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 TRPM1Q7Z4N2 1603 aa23.58■■□□□ 1.36
COLCA2-206ENST00000638573 PLCH1Q4KWH8 1693 aa23.57■■□□□ 1.36
COLCA2-206ENST00000638573 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
COLCA2-206ENST00000638573 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
COLCA2-206ENST00000638573 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
COLCA2-206ENST00000638573 QRICH2Q9H0J4 1663 aa23.55■■□□□ 1.36
COLCA2-206ENST00000638573 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.55■■□□□ 1.36
COLCA2-206ENST00000638573 ROCK2O75116 1388 aaKnown RBP23.54■■□□□ 1.36
COLCA2-206ENST00000638573 CCDC9Q9Y3X0 531 aaKnown RBP23.54■■□□□ 1.36
COLCA2-206ENST00000638573 ITSN1Q15811 1721 aa23.53■■□□□ 1.36
COLCA2-206ENST00000638573 CRYBG1Q9Y4K1 1723 aa23.53■■□□□ 1.36
COLCA2-206ENST00000638573 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
COLCA2-206ENST00000638573 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
COLCA2-206ENST00000638573 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
COLCA2-206ENST00000638573 CHRNA2Q15822 529 aa23.52■■□□□ 1.36
COLCA2-206ENST00000638573 VPS72Q15906 364 aa23.52■■□□□ 1.36
COLCA2-206ENST00000638573 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
COLCA2-206ENST00000638573 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
COLCA2-206ENST00000638573 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
COLCA2-206ENST00000638573 CABP1Q9NZU7 370 aa23.49■■□□□ 1.35
COLCA2-206ENST00000638573 KIAA0232Q92628 1395 aa23.49■■□□□ 1.35
COLCA2-206ENST00000638573 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
COLCA2-206ENST00000638573 PRDM11Q9NQV5 511 aa23.47■■□□□ 1.35
COLCA2-206ENST00000638573 NWD2Q9ULI1 1742 aa23.46■■□□□ 1.35
COLCA2-206ENST00000638573 PHRF1Q9P1Y6 1649 aaKnown RBP23.45■■□□□ 1.34
COLCA2-206ENST00000638573 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
COLCA2-206ENST00000638573 ABTB2Q8N961 1025 aa23.44■■□□□ 1.34
COLCA2-206ENST00000638573 COL14A1Q05707 1796 aaKnown RBP23.44■■□□□ 1.34
COLCA2-206ENST00000638573 TONSLQ96HA7 1378 aa23.42■■□□□ 1.34
COLCA2-206ENST00000638573 A0A0G2JS52 829 aa23.42■■□□□ 1.34
COLCA2-206ENST00000638573 MYT1Q01538 1121 aa23.42■■□□□ 1.34
COLCA2-206ENST00000638573 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
COLCA2-206ENST00000638573 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
COLCA2-206ENST00000638573 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
COLCA2-206ENST00000638573 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
COLCA2-206ENST00000638573 CCER1Q8TC90 406 aaPredicted RBP23.41■■□□□ 1.34
COLCA2-206ENST00000638573 STRN4Q9NRL3 753 aa23.41■■□□□ 1.34
COLCA2-206ENST00000638573 USP6P35125 1406 aa23.41■■□□□ 1.34
COLCA2-206ENST00000638573 USP19O94966 1318 aa23.4■■□□□ 1.34
COLCA2-206ENST00000638573 FAM182BQ5T319 152 aa23.4■■□□□ 1.34
COLCA2-206ENST00000638573 CARD11Q9BXL7 1154 aa23.4■■□□□ 1.34
COLCA2-206ENST00000638573 SPATA31A5Q5VU36 1347 aa23.39■■□□□ 1.34
COLCA2-206ENST00000638573 SPATA31A7Q8IWB4 1347 aa23.39■■□□□ 1.34
COLCA2-206ENST00000638573 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
COLCA2-206ENST00000638573 EP400Q96L91 3159 aa23.38■■□□□ 1.33
COLCA2-206ENST00000638573 SSH2Q76I76 1423 aa23.36■■□□□ 1.33
COLCA2-206ENST00000638573 ZBTB7CA1YPR0 619 aa23.36■■□□□ 1.33
COLCA2-206ENST00000638573 KRT27Q7Z3Y8 459 aa23.35■■□□□ 1.33
COLCA2-206ENST00000638573 DEFB132Q7Z7B7 95 aa23.35■■□□□ 1.33
COLCA2-206ENST00000638573 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
COLCA2-206ENST00000638573 GCP02774 474 aa23.34■■□□□ 1.33
COLCA2-206ENST00000638573 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
COLCA2-206ENST00000638573 NLRP6P59044 892 aa23.33■■□□□ 1.33
COLCA2-206ENST00000638573 NLRP13Q86W25 1043 aa23.33■■□□□ 1.33
COLCA2-206ENST00000638573 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.32
COLCA2-206ENST00000638573 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
COLCA2-206ENST00000638573 PIK3C2AO00443 1686 aa23.32■■□□□ 1.32
COLCA2-206ENST00000638573 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
COLCA2-206ENST00000638573 TTC21BQ7Z4L5 1316 aa23.31■■□□□ 1.32
COLCA2-206ENST00000638573 SOX12O15370 315 aa23.3■■□□□ 1.32
COLCA2-206ENST00000638573 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
COLCA2-206ENST00000638573 CPDO75976 1380 aa23.29■■□□□ 1.32
COLCA2-206ENST00000638573 LMO7Q8WWI1 1683 aa23.29■■□□□ 1.32
COLCA2-206ENST00000638573 THSD7AQ9UPZ6 1657 aa23.28■■□□□ 1.32
COLCA2-206ENST00000638573 CPSF1Q10570 1443 aaKnown RBP23.28■■□□□ 1.32
COLCA2-206ENST00000638573 SLIT3O75094 1523 aa23.28■■□□□ 1.32
COLCA2-206ENST00000638573 EVA1CP58658 441 aa23.27■■□□□ 1.32
COLCA2-206ENST00000638573 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
COLCA2-206ENST00000638573 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
COLCA2-206ENST00000638573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.25■■□□□ 1.31
COLCA2-206ENST00000638573 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
COLCA2-206ENST00000638573 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
COLCA2-206ENST00000638573 KTN1Q86UP2 1357 aaKnown RBP23.25■■□□□ 1.31
COLCA2-206ENST00000638573 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
COLCA2-206ENST00000638573 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
COLCA2-206ENST00000638573 COL5A2P05997 1499 aaPredicted RBP23.24■■□□□ 1.31
COLCA2-206ENST00000638573 AKAP12Q02952 1782 aa23.23■■□□□ 1.31
COLCA2-206ENST00000638573 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
COLCA2-206ENST00000638573 TESK2Q96S53 571 aa23.23■■□□□ 1.31
COLCA2-206ENST00000638573 AXIN2Q9Y2T1 843 aa23.23■■□□□ 1.31
COLCA2-206ENST00000638573 NME9Q86XW9 330 aa23.22■■□□□ 1.31
COLCA2-206ENST00000638573 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
COLCA2-206ENST00000638573 ZNF692Q9BU19 519 aaPredicted RBP23.21■■□□□ 1.31
COLCA2-206ENST00000638573 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
COLCA2-206ENST00000638573 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
COLCA2-206ENST00000638573 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
COLCA2-206ENST00000638573 TTC21AQ8NDW8 1320 aa23.17■■□□□ 1.3
COLCA2-206ENST00000638573 BARGINQ6ZT62 677 aa23.17■■□□□ 1.3
COLCA2-206ENST00000638573 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
COLCA2-206ENST00000638573 NFAT5O94916 1531 aa23.17■■□□□ 1.3
COLCA2-206ENST00000638573 COL18A1P39060 1754 aa23.17■■□□□ 1.3
COLCA2-206ENST00000638573 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
COLCA2-206ENST00000638573 A0A1W2PP64 1363 aa23.16■■□□□ 1.3
COLCA2-206ENST00000638573 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
COLCA2-206ENST00000638573 TRIM37O94972 964 aa23.14■■□□□ 1.29
COLCA2-206ENST00000638573 CRB1P82279 1406 aa23.14■■□□□ 1.29
COLCA2-206ENST00000638573 USP47Q96K76 1375 aa23.13■■□□□ 1.29
COLCA2-206ENST00000638573 TOM1L2Q6ZVM7 507 aa23.12■■□□□ 1.29
COLCA2-206ENST00000638573 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
COLCA2-206ENST00000638573 BAG6P46379 1132 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms