RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 AFF2P51816 1311 aa30.65■■■□□ 2.5
SCN1B-206ENST00000638536 NUTM2GQ5VZR2 741 aa30.64■■■□□ 2.5
SCN1B-206ENST00000638536 CRYBG1Q9Y4K1 1723 aa30.63■■■□□ 2.49
SCN1B-206ENST00000638536 USP6P35125 1406 aa30.63■■■□□ 2.49
SCN1B-206ENST00000638536 NGLY1Q96IV0 654 aa30.62■■■□□ 2.49
SCN1B-206ENST00000638536 SLC12A5Q9H2X9 1139 aa30.62■■■□□ 2.49
SCN1B-206ENST00000638536 CD163L1Q9NR16 1453 aa30.6■■■□□ 2.49
SCN1B-206ENST00000638536 CPSF1Q10570 1443 aaKnown RBP30.6■■■□□ 2.49
SCN1B-206ENST00000638536 TMC1Q8TDI8 760 aa30.6■■■□□ 2.49
SCN1B-206ENST00000638536 SSH2Q76I76 1423 aa30.59■■■□□ 2.49
SCN1B-206ENST00000638536 HAP1P54257 671 aaPredicted RBP30.58■■■□□ 2.49
SCN1B-206ENST00000638536 ABTB2Q8N961 1025 aa30.58■■■□□ 2.49
SCN1B-206ENST00000638536 PUS7Q96PZ0 661 aaKnown RBP30.58■■■□□ 2.49
SCN1B-206ENST00000638536 HSPA5P11021 654 aaKnown RBP30.56■■■□□ 2.48
SCN1B-206ENST00000638536 TMF1P82094 1093 aa30.56■■■□□ 2.48
SCN1B-206ENST00000638536 ZNF772Q68DY9 489 aaPredicted RBP30.56■■■□□ 2.48
SCN1B-206ENST00000638536 MON2Q7Z3U7 1717 aa30.55■■■□□ 2.48
SCN1B-206ENST00000638536 FNBP4Q8N3X1 1017 aaPredicted RBP30.55■■■□□ 2.48
SCN1B-206ENST00000638536 ZNF692Q9BU19 519 aaPredicted RBP30.55■■■□□ 2.48
SCN1B-206ENST00000638536 NRKQ7Z2Y5 1582 aa30.54■■■□□ 2.48
SCN1B-206ENST00000638536 PHRF1Q9P1Y6 1649 aaKnown RBP30.53■■■□□ 2.48
SCN1B-206ENST00000638536 SLC24A1O60721 1099 aa30.53■■■□□ 2.48
SCN1B-206ENST00000638536 EIF4G2P78344 907 aaKnown RBP eCLIP30.53■■■□□ 2.48
SCN1B-206ENST00000638536 KTN1Q86UP2 1357 aaKnown RBP30.53■■■□□ 2.48
SCN1B-206ENST00000638536 PIK3C2AO00443 1686 aa30.53■■■□□ 2.48
SCN1B-206ENST00000638536 TTC21BQ7Z4L5 1316 aa30.52■■■□□ 2.48
SCN1B-206ENST00000638536 USP21Q9UK80 565 aa30.51■■■□□ 2.48
SCN1B-206ENST00000638536 BRD4O60885 1362 aaPredicted RBP30.51■■■□□ 2.48
SCN1B-206ENST00000638536 BCL9LQ86UU0 1499 aa30.5■■■□□ 2.47
SCN1B-206ENST00000638536 FAM83GA6ND36 823 aa30.5■■■□□ 2.47
SCN1B-206ENST00000638536 A0A1W2PP64 1363 aa30.49■■■□□ 2.47
SCN1B-206ENST00000638536 QTRT2Q9H974 415 aaKnown RBP30.48■■■□□ 2.47
SCN1B-206ENST00000638536 SLIT2O94813 1529 aa30.48■■■□□ 2.47
SCN1B-206ENST00000638536 PLCH1Q4KWH8 1693 aa30.47■■■□□ 2.47
SCN1B-206ENST00000638536 USP19O94966 1318 aa30.46■■■□□ 2.47
SCN1B-206ENST00000638536 NLRP6P59044 892 aa30.46■■■□□ 2.47
SCN1B-206ENST00000638536 NLRP13Q86W25 1043 aa30.45■■■□□ 2.47
SCN1B-206ENST00000638536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.45■■■□□ 2.47
SCN1B-206ENST00000638536 ZC3H6P61129 1189 aaKnown RBP30.44■■■□□ 2.46
SCN1B-206ENST00000638536 HDGFL2Q7Z4V5 671 aaPredicted RBP30.44■■■□□ 2.46
SCN1B-206ENST00000638536 ZRANB1Q9UGI0 708 aa30.44■■■□□ 2.46
SCN1B-206ENST00000638536 MYOM1P52179 1685 aa30.44■■■□□ 2.46
SCN1B-206ENST00000638536 TERF2IPQ9NYB0 399 aa30.43■■■□□ 2.46
SCN1B-206ENST00000638536 KIAA0232Q92628 1395 aa30.42■■■□□ 2.46
SCN1B-206ENST00000638536 NINLQ9Y2I6 1382 aa30.42■■■□□ 2.46
SCN1B-206ENST00000638536 TTC21AQ8NDW8 1320 aa30.41■■■□□ 2.46
SCN1B-206ENST00000638536 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.41■■■□□ 2.46
SCN1B-206ENST00000638536 ATRNO75882 1429 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 GCP02774 474 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 NME9Q86XW9 330 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 C11orf95C9JLR9 678 aaPredicted RBP30.4■■■□□ 2.46
SCN1B-206ENST00000638536 RXRBP28702 533 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 CHRNA2Q15822 529 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 CDCA8Q53HL2 280 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 UNC5CLQ8IV45 518 aa30.4■■■□□ 2.46
SCN1B-206ENST00000638536 COL14A1Q05707 1796 aaKnown RBP30.39■■■□□ 2.46
SCN1B-206ENST00000638536 NWD2Q9ULI1 1742 aa30.39■■■□□ 2.46
SCN1B-206ENST00000638536 TRPC5Q9UL62 973 aaPredicted RBP30.39■■■□□ 2.46
SCN1B-206ENST00000638536 EDC4Q6P2E9 1401 aaKnown RBP30.38■■■□□ 2.45
SCN1B-206ENST00000638536 SLIT3O75094 1523 aa30.38■■■□□ 2.45
SCN1B-206ENST00000638536 PRDM11Q9NQV5 511 aa30.37■■■□□ 2.45
SCN1B-206ENST00000638536 BTG4Q9NY30 223 aa30.37■■■□□ 2.45
SCN1B-206ENST00000638536 ANKRD36BQ8N2N9 1353 aa30.37■■■□□ 2.45
SCN1B-206ENST00000638536 NRAPQ86VF7 1730 aa30.37■■■□□ 2.45
SCN1B-206ENST00000638536 POLR3GLQ9BT43 218 aa30.36■■■□□ 2.45
SCN1B-206ENST00000638536 RBM6P78332 1123 aaKnown RBP30.35■■■□□ 2.45
SCN1B-206ENST00000638536 SOX12O15370 315 aa30.33■■■□□ 2.45
SCN1B-206ENST00000638536 USP54Q70EL1 1684 aa30.31■■■□□ 2.44
SCN1B-206ENST00000638536 CPDO75976 1380 aa30.31■■■□□ 2.44
SCN1B-206ENST00000638536 USP31Q70CQ4 1352 aa30.31■■■□□ 2.44
SCN1B-206ENST00000638536 GLI3P10071 1580 aa30.3■■■□□ 2.44
SCN1B-206ENST00000638536 GJD4Q96KN9 370 aaPredicted RBP30.3■■■□□ 2.44
SCN1B-206ENST00000638536 SOCS7O14512 581 aa30.29■■■□□ 2.44
SCN1B-206ENST00000638536 CARD14Q9BXL6 1004 aa30.29■■■□□ 2.44
SCN1B-206ENST00000638536 LMO7Q8WWI1 1683 aa30.29■■■□□ 2.44
SCN1B-206ENST00000638536 RGS12O14924 1447 aa30.29■■■□□ 2.44
SCN1B-206ENST00000638536 CAMTA1Q9Y6Y1 1673 aa30.28■■■□□ 2.44
SCN1B-206ENST00000638536 ZBTB7CA1YPR0 619 aa30.28■■■□□ 2.44
SCN1B-206ENST00000638536 VPS72Q15906 364 aa30.27■■■□□ 2.44
SCN1B-206ENST00000638536 NFAT5O94916 1531 aa30.27■■■□□ 2.44
SCN1B-206ENST00000638536 COL18A1P39060 1754 aa30.26■■■□□ 2.43
SCN1B-206ENST00000638536 OVOS2A0A0J9YW53 1432 aa30.25■■■□□ 2.43
SCN1B-206ENST00000638536 OVOS2Q6IE36 1432 aa30.25■■■□□ 2.43
SCN1B-206ENST00000638536 CDK12Q9NYV4 1490 aaPredicted RBP30.25■■■□□ 2.43
SCN1B-206ENST00000638536 RGPD5Q99666 1765 aa30.24■■■□□ 2.43
SCN1B-206ENST00000638536 ARHGEF25Q86VW2 580 aa30.23■■■□□ 2.43
SCN1B-206ENST00000638536 KCNH5Q8NCM2 988 aa30.23■■■□□ 2.43
SCN1B-206ENST00000638536 CCDC9Q9Y3X0 531 aaKnown RBP30.23■■■□□ 2.43
SCN1B-206ENST00000638536 FYB1O15117 783 aa30.22■■■□□ 2.43
SCN1B-206ENST00000638536 STRN4Q9NRL3 753 aa30.22■■■□□ 2.43
SCN1B-206ENST00000638536 AXIN2Q9Y2T1 843 aa30.22■■■□□ 2.43
SCN1B-206ENST00000638536 NSD3Q9BZ95 1437 aa30.2■■■□□ 2.43
SCN1B-206ENST00000638536 KIF7Q2M1P5 1343 aa30.2■■■□□ 2.43
SCN1B-206ENST00000638536 GGNBP2Q9H3C7 697 aa30.2■■■□□ 2.43
SCN1B-206ENST00000638536 KIF20BQ96Q89 1820 aa30.19■■■□□ 2.42
SCN1B-206ENST00000638536 FBLN1P23142 703 aa30.19■■■□□ 2.42
SCN1B-206ENST00000638536 EP400Q96L91 3159 aa30.19■■■□□ 2.42
SCN1B-206ENST00000638536 LTN1O94822 1766 aa30.19■■■□□ 2.42
SCN1B-206ENST00000638536 AATKQ6ZMQ8 1374 aa30.19■■■□□ 2.42
SCN1B-206ENST00000638536 SPATA31A5Q5VU36 1347 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms