RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
CHD2-226ENST00000636881 SHROOM2Q13796 1616 aa10.56□□□□□ -0.72
CHD2-226ENST00000636881 IBTKQ9P2D0 1353 aaPredicted RBP10.56□□□□□ -0.72
CHD2-226ENST00000636881 UQCRHLA0A096LP55 91 aa10.56□□□□□ -0.72
CHD2-226ENST00000636881 U2SURPO15042 1029 aaKnown RBP10.56□□□□□ -0.72
CHD2-226ENST00000636881 UQCRHP07919 91 aa10.56□□□□□ -0.72
CHD2-226ENST00000636881 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
CHD2-226ENST00000636881 ARID3AQ99856 593 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 KIF16BQ96L93 1317 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 ZNF518AQ6AHZ1 1483 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
CHD2-226ENST00000636881 KIF2CQ99661 725 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 ADGRF5Q8IZF2 1346 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 AK9Q5TCS8 1911 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.55□□□□□ -0.72
CHD2-226ENST00000636881 HS1BP3Q53T59 392 aa10.55□□□□□ -0.72
CHD2-226ENST00000636881 PTPRTO14522 1441 aa10.54□□□□□ -0.72
CHD2-226ENST00000636881 ZNF445P59923 1031 aa10.54□□□□□ -0.72
CHD2-226ENST00000636881 NCBP3Q53F19 620 aaKnown RBP10.54□□□□□ -0.72
CHD2-226ENST00000636881 NUCB2P80303 420 aa10.54□□□□□ -0.72
CHD2-226ENST00000636881 TBC1D9Q6ZT07 1266 aa10.54□□□□□ -0.72
CHD2-226ENST00000636881 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
CHD2-226ENST00000636881 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
CHD2-226ENST00000636881 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
CHD2-226ENST00000636881 ZSCAN23Q3MJ62 389 aa10.53□□□□□ -0.72
CHD2-226ENST00000636881 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
CHD2-226ENST00000636881 ABCA6Q8N139 1617 aa10.53□□□□□ -0.72
CHD2-226ENST00000636881 SPAG9O60271 1321 aaKnown RBP10.53□□□□□ -0.72
CHD2-226ENST00000636881 CLEC17AQ6ZS10 378 aa10.53□□□□□ -0.72
CHD2-226ENST00000636881 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
CHD2-226ENST00000636881 RBSNQ9H1K0 784 aa10.53□□□□□ -0.72
CHD2-226ENST00000636881 MAP3K4Q9Y6R4 1608 aa10.52□□□□□ -0.72
CHD2-226ENST00000636881 ZNF500O60304 480 aaPredicted RBP10.52□□□□□ -0.73
CHD2-226ENST00000636881 TMPOP42166 694 aaKnown RBP10.52□□□□□ -0.73
CHD2-226ENST00000636881 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
CHD2-226ENST00000636881 ABCC11Q96J66 1382 aa10.52□□□□□ -0.73
CHD2-226ENST00000636881 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.73
CHD2-226ENST00000636881 CDC45O75419 566 aa10.52□□□□□ -0.73
CHD2-226ENST00000636881 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.73
CHD2-226ENST00000636881 SBNO2Q9Y2G9 1366 aa10.51□□□□□ -0.73
CHD2-226ENST00000636881 RABEP1Q15276 862 aa10.51□□□□□ -0.73
CHD2-226ENST00000636881 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
CHD2-226ENST00000636881 ZKSCAN5Q9Y2L8 839 aa10.51□□□□□ -0.73
CHD2-226ENST00000636881 ADGRL1O94910 1474 aa10.51□□□□□ -0.73
CHD2-226ENST00000636881 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
CHD2-226ENST00000636881 PODXL2Q9NZ53 605 aa10.51□□□□□ -0.73
CHD2-226ENST00000636881 DYNC1I1O14576 645 aa10.5□□□□□ -0.73
CHD2-226ENST00000636881 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
CHD2-226ENST00000636881 PRPF40AO75400 957 aaKnown RBP10.5□□□□□ -0.73
CHD2-226ENST00000636881 LMBRD1Q9NUN5 540 aa10.5□□□□□ -0.73
CHD2-226ENST00000636881 CCDC39Q9UFE4 941 aa10.5□□□□□ -0.73
CHD2-226ENST00000636881 PRDM4Q9UKN5 801 aa10.5□□□□□ -0.73
CHD2-226ENST00000636881 MYOM2P54296 1465 aa10.5□□□□□ -0.73
CHD2-226ENST00000636881 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
CHD2-226ENST00000636881 RBM27Q9P2N5 1060 aaKnown RBP10.5□□□□□ -0.73
CHD2-226ENST00000636881 TRAPPC8Q9Y2L5 1435 aa10.5□□□□□ -0.73
CHD2-226ENST00000636881 ADGRB2O60241 1585 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 SASS6Q6UVJ0 657 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 PDLIM2Q96JY6 352 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 TET3O43151 1660 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 NOS1P29475 1434 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 IL16Q14005 1332 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 MCM5P33992 734 aa10.49□□□□□ -0.73
CHD2-226ENST00000636881 SMAP1Q8IYB5 467 aaPredicted RBP10.49□□□□□ -0.73
CHD2-226ENST00000636881 MYO3AQ8NEV4 1616 aa10.48□□□□□ -0.73
CHD2-226ENST00000636881 ALDH1L2Q3SY69 923 aa10.48□□□□□ -0.73
CHD2-226ENST00000636881 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
CHD2-226ENST00000636881 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
CHD2-226ENST00000636881 KIF1BO60333 1816 aa10.48□□□□□ -0.73
CHD2-226ENST00000636881 KIF3BO15066 747 aa10.48□□□□□ -0.73
CHD2-226ENST00000636881 DNTTIP2Q5QJE6 756 aaKnown RBP10.48□□□□□ -0.73
CHD2-226ENST00000636881 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 AFAP1Q8N556 730 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 CWC22Q9HCG8 908 aaKnown RBP10.47□□□□□ -0.73
CHD2-226ENST00000636881 UGGT1Q9NYU2 1555 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 NSD2O96028 1365 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 SYCE3A1L190 88 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 LRSAM1Q6UWE0 723 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 PLCH2O75038 1416 aa10.47□□□□□ -0.73
CHD2-226ENST00000636881 ST18O60284 1047 aa10.46□□□□□ -0.73
CHD2-226ENST00000636881 PRDM10Q9NQV6 1147 aa10.46□□□□□ -0.73
CHD2-226ENST00000636881 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
CHD2-226ENST00000636881 PKP1Q13835 747 aa10.46□□□□□ -0.73
CHD2-226ENST00000636881 RNF214Q8ND24 703 aa10.46□□□□□ -0.73
CHD2-226ENST00000636881 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.73
CHD2-226ENST00000636881 QRICH2Q9H0J4 1663 aa10.46□□□□□ -0.74
CHD2-226ENST00000636881 USP32Q8NFA0 1604 aa10.46□□□□□ -0.74
CHD2-226ENST00000636881 ZBTB7BO15156 539 aaPredicted RBP10.46□□□□□ -0.74
CHD2-226ENST00000636881 ABCC1P33527 1531 aa10.45□□□□□ -0.74
CHD2-226ENST00000636881 ARHGAP31Q2M1Z3 1444 aa10.45□□□□□ -0.74
CHD2-226ENST00000636881 TMEM132EQ6IEE7 984 aa10.45□□□□□ -0.74
CHD2-226ENST00000636881 GPT2Q8TD30 523 aa10.45□□□□□ -0.74
CHD2-226ENST00000636881 CYP2E1P05181 493 aaPredicted RBP10.45□□□□□ -0.74
CHD2-226ENST00000636881 FOXD4L5Q5VV16 416 aaPredicted RBP10.45□□□□□ -0.74
CHD2-226ENST00000636881 FOXD4L4Q8WXT5 416 aaPredicted RBP10.45□□□□□ -0.74
CHD2-226ENST00000636881 EVC2Q86UK5 1308 aa10.45□□□□□ -0.74
CHD2-226ENST00000636881 CASC1Q6TDU7 716 aa10.45□□□□□ -0.74
CHD2-226ENST00000636881 KIAA2012Q0VF49 1180 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms