RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 MRC2Q9UBG0 1479 aa7.34□□□□□ -1.23
CHD2-221ENST00000635856 RIOK3O14730 519 aaKnown RBP7.34□□□□□ -1.23
CHD2-221ENST00000635856 RNF20Q5VTR2 975 aa7.34□□□□□ -1.23
CHD2-221ENST00000635856 AP1ARQ63HQ0 302 aa7.34□□□□□ -1.23
CHD2-221ENST00000635856 MNAT1P51948 309 aa7.34□□□□□ -1.24
CHD2-221ENST00000635856 SYCP1Q15431 976 aa7.34□□□□□ -1.24
CHD2-221ENST00000635856 RNF214Q8ND24 703 aa7.34□□□□□ -1.24
CHD2-221ENST00000635856 IBTKQ9P2D0 1353 aaPredicted RBP7.33□□□□□ -1.24
CHD2-221ENST00000635856 ATP2B1P20020 1258 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 ZNF445P59923 1031 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 SART3Q15020 963 aaKnown RBP7.33□□□□□ -1.24
CHD2-221ENST00000635856 CDCA8Q53HL2 280 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 PPM1EQ8WY54 764 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 SGSM3Q96HU1 749 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 TBC1D32Q96NH3 1257 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 HDAC1Q13547 482 aaPredicted RBP7.33□□□□□ -1.24
CHD2-221ENST00000635856 FMNL3Q8IVF7 1028 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 FAM212AQ96EL1 285 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 CCDC97Q96F63 343 aaPredicted RBP7.33□□□□□ -1.24
CHD2-221ENST00000635856 LRRFIP2Q9Y608 721 aaKnown RBP7.33□□□□□ -1.24
CHD2-221ENST00000635856 TDRD9Q8NDG6 1382 aaKnown RBP7.33□□□□□ -1.24
CHD2-221ENST00000635856 IVLP07476 585 aa7.33□□□□□ -1.24
CHD2-221ENST00000635856 MCTP1Q6DN14 999 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 ANKRD7Q92527 254 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 PDLIM2Q96JY6 352 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 CC2D2BQ6DHV5 1058 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 MCTP2Q6DN12 878 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 CTNNA3Q9UI47 895 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 ZSCAN23Q3MJ62 389 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 TSPY26PQ9H489 355 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 SYT10Q6XYQ8 523 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 FAM184AQ8NB25 1140 aa7.32□□□□□ -1.24
CHD2-221ENST00000635856 CTAGE5O15320 804 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 IPO8O15397 1037 aaKnown RBP7.31□□□□□ -1.24
CHD2-221ENST00000635856 E2F4Q16254 413 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 ITFG2Q969R8 447 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 NEBLO76041 1014 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 CYP2C19P33261 490 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 ZSCAN26Q16670 478 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 DNAJC21Q5F1R6 531 aaKnown RBP7.31□□□□□ -1.24
CHD2-221ENST00000635856 TTLL5Q6EMB2 1281 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 KIF18AQ8NI77 898 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 JARID2Q92833 1246 aaPredicted RBP7.31□□□□□ -1.24
CHD2-221ENST00000635856 RBSNQ9H1K0 784 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 PAXBP1Q9Y5B6 917 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 V9GYY5 206 aaPredicted RBP7.31□□□□□ -1.24
CHD2-221ENST00000635856 JAKMIP3Q5VZ66 844 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 FOXD4L1Q9NU39 408 aa7.31□□□□□ -1.24
CHD2-221ENST00000635856 FKBP5Q13451 457 aaPredicted RBP7.3□□□□□ -1.24
CHD2-221ENST00000635856 DRC7Q8IY82 874 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 TMCO5BA8MYB1 307 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 MBD3O95983 291 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 ERCC4Q92889 916 aaPredicted RBP7.3□□□□□ -1.24
CHD2-221ENST00000635856 FAM107BQ9H098 131 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 IRAK4Q9NWZ3 460 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 NESP48681 1621 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 SMTNL1A8MU46 457 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 SMC2O95347 1197 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 IRX1P78414 480 aaPredicted RBP7.3□□□□□ -1.24
CHD2-221ENST00000635856 JMYQ8N9B5 988 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 PMFBP1Q8TBY8 1022 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 IFT57Q9NWB7 429 aa7.3□□□□□ -1.24
CHD2-221ENST00000635856 RRP15Q9Y3B9 282 aaKnown RBP7.3□□□□□ -1.24
CHD2-221ENST00000635856 POLR3GO15318 223 aaPredicted RBP7.29□□□□□ -1.24
CHD2-221ENST00000635856 ERCC3P19447 782 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 GYS2P54840 703 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 MUM1L1Q5H9M0 696 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 LRSAM1Q6UWE0 723 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 GBP6Q6ZN66 633 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 KIF2AO00139 706 aaPredicted RBP7.29□□□□□ -1.24
CHD2-221ENST00000635856 PRIM1P49642 420 aaKnown RBP7.29□□□□□ -1.24
CHD2-221ENST00000635856 CARMIL2Q6F5E8 1435 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 MAGEA9P43362 315 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 RAB3GAP1Q15042 981 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 ZRSR2Q15696 482 aaKnown RBP7.29□□□□□ -1.24
CHD2-221ENST00000635856 C20orf194Q5TEA3 1177 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 CCDC7Q96M83 1385 aa7.29□□□□□ -1.24
CHD2-221ENST00000635856 ANAPC4Q9UJX5 808 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 NEFHP12036 1026 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 WDR43Q15061 677 aaKnown RBP eCLIP7.28□□□□□ -1.241e-6■■□□□ 11.8
CHD2-221ENST00000635856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.28□□□□□ -1.243e-6■■■■■ 40.9
CHD2-221ENST00000635856 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
CHD2-221ENST00000635856 FGD5Q6ZNL6 1462 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 IFT140Q96RY7 1462 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 POLD1P28340 1107 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 NF2P35240 595 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 HSP90AB4PQ58FF6 505 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 MMS22LQ6ZRQ5 1243 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 TMX4Q9H1E5 349 aaPredicted RBP7.28□□□□□ -1.24
CHD2-221ENST00000635856 U2SURPO15042 1029 aaKnown RBP7.28□□□□□ -1.24
CHD2-221ENST00000635856 UVSSAQ2YD98 709 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 GOLGA5Q8TBA6 731 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 PNISRQ8TF01 805 aaKnown RBP7.28□□□□□ -1.24
CHD2-221ENST00000635856 DDX11Q96FC9 970 aa7.28□□□□□ -1.24
CHD2-221ENST00000635856 TACO1Q9BSH4 297 aaKnown RBP7.28□□□□□ -1.24
CHD2-221ENST00000635856 SYCE3A1L190 88 aa7.27□□□□□ -1.25
CHD2-221ENST00000635856 NAP1L1P55209 391 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 TPD52L1Q16890 204 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms