RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 SHPRHQ149N8 1683 aa11.25□□□□□ -0.61
CHD2-213ENST00000628118 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
CHD2-213ENST00000628118 PPIP5K1Q6PFW1 1433 aa11.25□□□□□ -0.61
CHD2-213ENST00000628118 DSG3P32926 999 aa11.24□□□□□ -0.61
CHD2-213ENST00000628118 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
CHD2-213ENST00000628118 PMFBP1Q8TBY8 1022 aa11.24□□□□□ -0.61
CHD2-213ENST00000628118 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
CHD2-213ENST00000628118 DDX17Q92841 729 aaKnown RBP11.23□□□□□ -0.61
CHD2-213ENST00000628118 SPATA31A3Q5VYP0 1347 aa11.23□□□□□ -0.61
CHD2-213ENST00000628118 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
CHD2-213ENST00000628118 ACEP12821 1306 aa11.22□□□□□ -0.61
CHD2-213ENST00000628118 TNS3Q68CZ2 1445 aa11.22□□□□□ -0.61
CHD2-213ENST00000628118 PNPLA6Q8IY17 1366 aa11.22□□□□□ -0.61
CHD2-213ENST00000628118 CABP1Q9NZU7 370 aa11.22□□□□□ -0.61
CHD2-213ENST00000628118 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
CHD2-213ENST00000628118 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
CHD2-213ENST00000628118 HDGFL2Q7Z4V5 671 aaPredicted RBP11.2□□□□□ -0.62
CHD2-213ENST00000628118 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
CHD2-213ENST00000628118 TRPM3Q9HCF6 1732 aaPredicted RBP11.2□□□□□ -0.62
CHD2-213ENST00000628118 CPSF1Q10570 1443 aaKnown RBP11.19□□□□□ -0.62
CHD2-213ENST00000628118 DISP3Q9P2K9 1392 aa11.19□□□□□ -0.62
CHD2-213ENST00000628118 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
CHD2-213ENST00000628118 USP6P35125 1406 aa11.18□□□□□ -0.62
CHD2-213ENST00000628118 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
CHD2-213ENST00000628118 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
CHD2-213ENST00000628118 TTC21AQ8NDW8 1320 aa11.17□□□□□ -0.62
CHD2-213ENST00000628118 ALS2Q96Q42 1657 aa11.17□□□□□ -0.62
CHD2-213ENST00000628118 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
CHD2-213ENST00000628118 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
CHD2-213ENST00000628118 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
CHD2-213ENST00000628118 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
CHD2-213ENST00000628118 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
CHD2-213ENST00000628118 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
CHD2-213ENST00000628118 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.62
CHD2-213ENST00000628118 ABCB7O75027 752 aa11.15□□□□□ -0.62
CHD2-213ENST00000628118 POLA2Q14181 598 aa11.15□□□□□ -0.62
CHD2-213ENST00000628118 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
CHD2-213ENST00000628118 LMOD2Q6P5Q4 547 aa11.15□□□□□ -0.62
CHD2-213ENST00000628118 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
CHD2-213ENST00000628118 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
CHD2-213ENST00000628118 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
CHD2-213ENST00000628118 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
CHD2-213ENST00000628118 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
CHD2-213ENST00000628118 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
CHD2-213ENST00000628118 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
CHD2-213ENST00000628118 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
CHD2-213ENST00000628118 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
CHD2-213ENST00000628118 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
CHD2-213ENST00000628118 LRP6O75581 1613 aa11.13□□□□□ -0.63
CHD2-213ENST00000628118 USP19O94966 1318 aa11.12□□□□□ -0.63
CHD2-213ENST00000628118 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
CHD2-213ENST00000628118 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
CHD2-213ENST00000628118 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
CHD2-213ENST00000628118 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
CHD2-213ENST00000628118 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
CHD2-213ENST00000628118 ABCA3Q99758 1704 aa11.1□□□□□ -0.63
CHD2-213ENST00000628118 NLRP6P59044 892 aa11.1□□□□□ -0.63
CHD2-213ENST00000628118 MYOM1P52179 1685 aa11.1□□□□□ -0.63
CHD2-213ENST00000628118 USP54Q70EL1 1684 aa11.1□□□□□ -0.63
CHD2-213ENST00000628118 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
CHD2-213ENST00000628118 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
CHD2-213ENST00000628118 FNBP4Q8N3X1 1017 aaPredicted RBP11.09□□□□□ -0.63
CHD2-213ENST00000628118 NGLY1Q96IV0 654 aa11.09□□□□□ -0.63
CHD2-213ENST00000628118 SLIT3O75094 1523 aa11.09□□□□□ -0.63
CHD2-213ENST00000628118 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
CHD2-213ENST00000628118 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
CHD2-213ENST00000628118 CPDO75976 1380 aa11.08□□□□□ -0.64
CHD2-213ENST00000628118 GCP02774 474 aa11.08□□□□□ -0.64
CHD2-213ENST00000628118 CABLES1Q8TDN4 633 aa11.08□□□□□ -0.64
CHD2-213ENST00000628118 C8orf37Q96NL8 207 aa11.08□□□□□ -0.64
CHD2-213ENST00000628118 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
CHD2-213ENST00000628118 PHRF1Q9P1Y6 1649 aaKnown RBP11.08□□□□□ -0.64
CHD2-213ENST00000628118 CCDC7Q96M83 1385 aa11.07□□□□□ -0.64
CHD2-213ENST00000628118 C11orf95C9JLR9 678 aaPredicted RBP11.07□□□□□ -0.64
CHD2-213ENST00000628118 POTEHQ6S545 545 aa11.07□□□□□ -0.64
CHD2-213ENST00000628118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHD2-213ENST00000628118 AFF2P51816 1311 aa11.07□□□□□ -0.64
CHD2-213ENST00000628118 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
CHD2-213ENST00000628118 SLIT2O94813 1529 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 COG3Q96JB2 828 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 OVOS2A0A0J9YW53 1432 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 OVOS2Q6IE36 1432 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 NWD2Q9ULI1 1742 aa11.06□□□□□ -0.64
CHD2-213ENST00000628118 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
CHD2-213ENST00000628118 NSD2O96028 1365 aa11.05□□□□□ -0.64
CHD2-213ENST00000628118 NME9Q86XW9 330 aa11.05□□□□□ -0.64
CHD2-213ENST00000628118 CARD14Q9BXL6 1004 aa11.05□□□□□ -0.64
CHD2-213ENST00000628118 PANK3Q9H999 370 aa11.05□□□□□ -0.64
CHD2-213ENST00000628118 PRDM11Q9NQV5 511 aa11.05□□□□□ -0.64
CHD2-213ENST00000628118 USP21Q9UK80 565 aa11.05□□□□□ -0.64
CHD2-213ENST00000628118 TRPC5Q9UL62 973 aaPredicted RBP11.05□□□□□ -0.64
CHD2-213ENST00000628118 ABCC6O95255 1503 aa11.04□□□□□ -0.64
CHD2-213ENST00000628118 KIAA0232Q92628 1395 aa11.04□□□□□ -0.64
CHD2-213ENST00000628118 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
CHD2-213ENST00000628118 FAM83GA6ND36 823 aa11.04□□□□□ -0.64
CHD2-213ENST00000628118 FYB1O15117 783 aa11.04□□□□□ -0.64
CHD2-213ENST00000628118 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
CHD2-213ENST00000628118 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms