RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ACEP12821 1306 aa31.77■■■□□ 2.68
SF1-220ENST00000626028 PPIP5K1Q6PFW1 1433 aa31.77■■■□□ 2.68
SF1-220ENST00000626028 RBM6P78332 1123 aaKnown RBP31.77■■■□□ 2.68
SF1-220ENST00000626028 HAP1P54257 671 aaPredicted RBP31.76■■■□□ 2.67
SF1-220ENST00000626028 TRPC5Q9UL62 973 aaPredicted RBP31.76■■■□□ 2.67
SF1-220ENST00000626028 BCL9LQ86UU0 1499 aa31.74■■■□□ 2.67
SF1-220ENST00000626028 CABP2Q9NPB3 220 aa31.74■■■□□ 2.67
SF1-220ENST00000626028 SLIT2O94813 1529 aa31.74■■■□□ 2.67
SF1-220ENST00000626028 PLCH1Q4KWH8 1693 aa31.73■■■□□ 2.67
SF1-220ENST00000626028 ATRNO75882 1429 aa31.72■■■□□ 2.67
SF1-220ENST00000626028 PAK3O75914 559 aaPredicted RBP31.71■■■□□ 2.67
SF1-220ENST00000626028 CABLES1Q8TDN4 633 aa31.7■■■□□ 2.67
SF1-220ENST00000626028 ATAD2Q6PL18 1390 aa31.68■■■□□ 2.66
SF1-220ENST00000626028 SLC24A1O60721 1099 aa31.68■■■□□ 2.66
SF1-220ENST00000626028 AKAP12Q02952 1782 aa31.68■■■□□ 2.66
SF1-220ENST00000626028 COL14A1Q05707 1796 aaKnown RBP31.68■■■□□ 2.66
SF1-220ENST00000626028 PHRF1Q9P1Y6 1649 aaKnown RBP31.67■■■□□ 2.66
SF1-220ENST00000626028 UNC5CLQ8IV45 518 aa31.65■■■□□ 2.66
SF1-220ENST00000626028 CABP1Q9NZU7 370 aa31.65■■■□□ 2.66
SF1-220ENST00000626028 USP6P35125 1406 aa31.63■■■□□ 2.65
SF1-220ENST00000626028 PUS7Q96PZ0 661 aaKnown RBP31.62■■■□□ 2.65
SF1-220ENST00000626028 RGS12O14924 1447 aa31.61■■■□□ 2.65
SF1-220ENST00000626028 ZNF692Q9BU19 519 aaPredicted RBP31.61■■■□□ 2.65
SF1-220ENST00000626028 NRAPQ86VF7 1730 aa31.6■■■□□ 2.65
SF1-220ENST00000626028 FAM83GA6ND36 823 aa31.59■■■□□ 2.65
SF1-220ENST00000626028 ABTB2Q8N961 1025 aa31.59■■■□□ 2.65
SF1-220ENST00000626028 GJD4Q96KN9 370 aaPredicted RBP31.59■■■□□ 2.65
SF1-220ENST00000626028 SSH2Q76I76 1423 aa31.57■■■□□ 2.64
SF1-220ENST00000626028 MON2Q7Z3U7 1717 aa31.56■■■□□ 2.64
SF1-220ENST00000626028 NLRP13Q86W25 1043 aa31.56■■■□□ 2.64
SF1-220ENST00000626028 PLEKHG5O94827 1062 aa31.55■■■□□ 2.64
SF1-220ENST00000626028 CPSF1Q10570 1443 aaKnown RBP31.55■■■□□ 2.64
SF1-220ENST00000626028 USP19O94966 1318 aa31.54■■■□□ 2.64
SF1-220ENST00000626028 VPS72Q15906 364 aa31.54■■■□□ 2.64
SF1-220ENST00000626028 NRKQ7Z2Y5 1582 aa31.54■■■□□ 2.64
SF1-220ENST00000626028 GLI3P10071 1580 aa31.53■■■□□ 2.64
SF1-220ENST00000626028 PIK3C2AO00443 1686 aa31.51■■■□□ 2.64
SF1-220ENST00000626028 TESK2Q96S53 571 aa31.51■■■□□ 2.63
SF1-220ENST00000626028 PRDM11Q9NQV5 511 aa31.51■■■□□ 2.63
SF1-220ENST00000626028 ST20-MTHFSA0A0A6YYL1 179 aa31.5■■■□□ 2.63
SF1-220ENST00000626028 CCER1Q8TC90 406 aaPredicted RBP31.5■■■□□ 2.63
SF1-220ENST00000626028 CPDO75976 1380 aa31.5■■■□□ 2.63
SF1-220ENST00000626028 TTC21AQ8NDW8 1320 aa31.49■■■□□ 2.63
SF1-220ENST00000626028 NINLQ9Y2I6 1382 aa31.48■■■□□ 2.63
SF1-220ENST00000626028 BTG4Q9NY30 223 aa31.48■■■□□ 2.63
SF1-220ENST00000626028 KIAA0232Q92628 1395 aa31.47■■■□□ 2.63
SF1-220ENST00000626028 USP47Q96K76 1375 aa31.47■■■□□ 2.63
SF1-220ENST00000626028 SLIT3O75094 1523 aa31.46■■■□□ 2.63
SF1-220ENST00000626028 NUTM2GQ5VZR2 741 aa31.46■■■□□ 2.63
SF1-220ENST00000626028 KTN1Q86UP2 1357 aaKnown RBP31.45■■■□□ 2.63
SF1-220ENST00000626028 USP54Q70EL1 1684 aa31.44■■■□□ 2.62
SF1-220ENST00000626028 BRWD3Q6RI45 1802 aa31.43■■■□□ 2.62
SF1-220ENST00000626028 ONECUT3O60422 494 aaPredicted RBP31.43■■■□□ 2.62
SF1-220ENST00000626028 GCP02774 474 aa31.43■■■□□ 2.62
SF1-220ENST00000626028 NLRP6P59044 892 aa31.43■■■□□ 2.62
SF1-220ENST00000626028 LMO7Q8WWI1 1683 aa31.43■■■□□ 2.62
SF1-220ENST00000626028 TTC21BQ7Z4L5 1316 aa31.43■■■□□ 2.62
SF1-220ENST00000626028 CD163L1Q9NR16 1453 aa31.42■■■□□ 2.62
SF1-220ENST00000626028 UPF1Q92900 1129 aaKnown RBP eCLIP31.42■■■□□ 2.62
SF1-220ENST00000626028 ZC3H6P61129 1189 aaKnown RBP31.4■■■□□ 2.62
SF1-220ENST00000626028 TERF2IPQ9NYB0 399 aa31.4■■■□□ 2.62
SF1-220ENST00000626028 HDGFL2Q7Z4V5 671 aaPredicted RBP31.39■■■□□ 2.62
SF1-220ENST00000626028 CCDC9Q9Y3X0 531 aaKnown RBP31.39■■■□□ 2.62
SF1-220ENST00000626028 TMF1P82094 1093 aa31.38■■■□□ 2.61
SF1-220ENST00000626028 EP400Q96L91 3159 aa31.37■■■□□ 2.61
SF1-220ENST00000626028 TMC1Q8TDI8 760 aa31.37■■■□□ 2.61
SF1-220ENST00000626028 EDC4Q6P2E9 1401 aaKnown RBP31.36■■■□□ 2.61
SF1-220ENST00000626028 SPATA31A5Q5VU36 1347 aa31.36■■■□□ 2.61
SF1-220ENST00000626028 SPATA31A7Q8IWB4 1347 aa31.36■■■□□ 2.61
SF1-220ENST00000626028 CDCA8Q53HL2 280 aa31.36■■■□□ 2.61
SF1-220ENST00000626028 KCNH5Q8NCM2 988 aa31.36■■■□□ 2.61
SF1-220ENST00000626028 SLC12A5Q9H2X9 1139 aa31.36■■■□□ 2.61
SF1-220ENST00000626028 CHRNA2Q15822 529 aa31.34■■■□□ 2.61
SF1-220ENST00000626028 CAMTA1Q9Y6Y1 1673 aa31.34■■■□□ 2.61
SF1-220ENST00000626028 USP31Q70CQ4 1352 aa31.32■■■□□ 2.6
SF1-220ENST00000626028 COL18A1P39060 1754 aa31.32■■■□□ 2.6
SF1-220ENST00000626028 A0A1W2PP64 1363 aa31.31■■■□□ 2.6
SF1-220ENST00000626028 AATKQ6ZMQ8 1374 aa31.31■■■□□ 2.6
SF1-220ENST00000626028 SEPT12Q8IYM1 358 aa31.31■■■□□ 2.6
SF1-220ENST00000626028 ABCC6O95255 1503 aa31.29■■■□□ 2.6
SF1-220ENST00000626028 THSD7AQ9UPZ6 1657 aa31.29■■■□□ 2.6
SF1-220ENST00000626028 SPATA31A1Q5TZJ5 1347 aa31.28■■■□□ 2.6
SF1-220ENST00000626028 EVA1CP58658 441 aa31.28■■■□□ 2.6
SF1-220ENST00000626028 CCDC125Q86Z20 511 aa31.27■■■□□ 2.6
SF1-220ENST00000626028 NFAT5O94916 1531 aa31.27■■■□□ 2.6
SF1-220ENST00000626028 COL5A2P05997 1499 aaPredicted RBP31.26■■■□□ 2.59
SF1-220ENST00000626028 STRN4Q9NRL3 753 aa31.25■■■□□ 2.59
SF1-220ENST00000626028 ANKRD36BQ8N2N9 1353 aa31.25■■■□□ 2.59
SF1-220ENST00000626028 FAM98CQ17RN3 349 aaKnown RBP31.24■■■□□ 2.59
SF1-220ENST00000626028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.24■■■□□ 2.59
SF1-220ENST00000626028 RGPD5Q99666 1765 aa31.24■■■□□ 2.59
SF1-220ENST00000626028 ARHGEF25Q86VW2 580 aa31.23■■■□□ 2.59
SF1-220ENST00000626028 LTN1O94822 1766 aa31.22■■■□□ 2.59
SF1-220ENST00000626028 KRT27Q7Z3Y8 459 aa31.22■■■□□ 2.59
SF1-220ENST00000626028 BARGINQ6ZT62 677 aa31.21■■■□□ 2.59
SF1-220ENST00000626028 THRAP3Q9Y2W1 955 aaKnown RBP31.21■■■□□ 2.59
SF1-220ENST00000626028 MYOM1P52179 1685 aa31.19■■■□□ 2.58
SF1-220ENST00000626028 CRB1P82279 1406 aa31.19■■■□□ 2.58
SF1-220ENST00000626028 NME9Q86XW9 330 aa31.19■■■□□ 2.58
SF1-220ENST00000626028 OVOS2A0A0J9YW53 1432 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms