RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TONSLQ96HA7 1378 aa15.46■□□□□ 0.07
SSBP4-215ENST00000625926 BTG4Q9NY30 223 aa15.45■□□□□ 0.06
SSBP4-215ENST00000625926 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
SSBP4-215ENST00000625926 PPIP5K1Q6PFW1 1433 aa15.44■□□□□ 0.06
SSBP4-215ENST00000625926 NUTM2GQ5VZR2 741 aa15.44■□□□□ 0.06
SSBP4-215ENST00000625926 ABTB2Q8N961 1025 aa15.44■□□□□ 0.06
SSBP4-215ENST00000625926 PRDM11Q9NQV5 511 aa15.44■□□□□ 0.06
SSBP4-215ENST00000625926 RALGAPBQ86X10 1494 aa15.44■□□□□ 0.06
SSBP4-215ENST00000625926 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
SSBP4-215ENST00000625926 RGPD8O14715 1765 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-215ENST00000625926 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
SSBP4-215ENST00000625926 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
SSBP4-215ENST00000625926 NLRP13Q86W25 1043 aa15.41■□□□□ 0.06
SSBP4-215ENST00000625926 BRD4O60885 1362 aaPredicted RBP15.4■□□□□ 0.06
SSBP4-215ENST00000625926 ZC3H6P61129 1189 aaKnown RBP15.4■□□□□ 0.06
SSBP4-215ENST00000625926 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
SSBP4-215ENST00000625926 KIAA0232Q92628 1395 aa15.39■□□□□ 0.05
SSBP4-215ENST00000625926 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
SSBP4-215ENST00000625926 CHRNA2Q15822 529 aa15.38■□□□□ 0.05
SSBP4-215ENST00000625926 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
SSBP4-215ENST00000625926 TRPM1Q7Z4N2 1603 aa15.37■□□□□ 0.05
SSBP4-215ENST00000625926 A0A0G2JS52 829 aa15.37■□□□□ 0.05
SSBP4-215ENST00000625926 MYT1Q01538 1121 aa15.37■□□□□ 0.05
SSBP4-215ENST00000625926 ALS2Q96Q42 1657 aa15.37■□□□□ 0.05
SSBP4-215ENST00000625926 USP19O94966 1318 aa15.37■□□□□ 0.05
SSBP4-215ENST00000625926 GCP02774 474 aa15.36■□□□□ 0.05
SSBP4-215ENST00000625926 NLRP6P59044 892 aa15.36■□□□□ 0.05
SSBP4-215ENST00000625926 FAM98CQ17RN3 349 aaKnown RBP15.36■□□□□ 0.05
SSBP4-215ENST00000625926 KRT27Q7Z3Y8 459 aa15.36■□□□□ 0.05
SSBP4-215ENST00000625926 SPATA31A5Q5VU36 1347 aa15.36■□□□□ 0.05
SSBP4-215ENST00000625926 SPATA31A7Q8IWB4 1347 aa15.36■□□□□ 0.05
SSBP4-215ENST00000625926 GLI3P10071 1580 aa15.36■□□□□ 0.05
SSBP4-215ENST00000625926 USP6P35125 1406 aa15.35■□□□□ 0.05
SSBP4-215ENST00000625926 MARF1Q9Y4F3 1742 aaKnown RBP15.35■□□□□ 0.05
SSBP4-215ENST00000625926 EVA1CP58658 441 aa15.35■□□□□ 0.05
SSBP4-215ENST00000625926 STRN4Q9NRL3 753 aa15.35■□□□□ 0.05
SSBP4-215ENST00000625926 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
SSBP4-215ENST00000625926 ITSN1Q15811 1721 aa15.34■□□□□ 0.05
SSBP4-215ENST00000625926 CPDO75976 1380 aa15.34■□□□□ 0.05
SSBP4-215ENST00000625926 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.34■□□□□ 0.05
SSBP4-215ENST00000625926 TOPAZ1Q8N9V7 1692 aa15.33■□□□□ 0.04
SSBP4-215ENST00000625926 SPATA31A1Q5TZJ5 1347 aa15.32■□□□□ 0.04
SSBP4-215ENST00000625926 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
SSBP4-215ENST00000625926 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
SSBP4-215ENST00000625926 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
SSBP4-215ENST00000625926 COL14A1Q05707 1796 aaKnown RBP15.31■□□□□ 0.04
SSBP4-215ENST00000625926 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
SSBP4-215ENST00000625926 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
SSBP4-215ENST00000625926 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
SSBP4-215ENST00000625926 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
SSBP4-215ENST00000625926 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
SSBP4-215ENST00000625926 PUS7Q96PZ0 661 aaKnown RBP15.3■□□□□ 0.04
SSBP4-215ENST00000625926 USP35Q9P2H5 1018 aa15.3■□□□□ 0.04
SSBP4-215ENST00000625926 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
SSBP4-215ENST00000625926 PLCH1Q4KWH8 1693 aa15.29■□□□□ 0.04
SSBP4-215ENST00000625926 BLMP54132 1417 aaPredicted RBP15.29■□□□□ 0.04
SSBP4-215ENST00000625926 CPSF1Q10570 1443 aaKnown RBP15.29■□□□□ 0.04
SSBP4-215ENST00000625926 KTN1Q86UP2 1357 aaKnown RBP15.29■□□□□ 0.04
SSBP4-215ENST00000625926 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
SSBP4-215ENST00000625926 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
SSBP4-215ENST00000625926 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
SSBP4-215ENST00000625926 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
SSBP4-215ENST00000625926 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
SSBP4-215ENST00000625926 IFFO2Q5TF58 517 aa15.28■□□□□ 0.04
SSBP4-215ENST00000625926 BARGINQ6ZT62 677 aa15.28■□□□□ 0.04
SSBP4-215ENST00000625926 ZRANB1Q9UGI0 708 aa15.28■□□□□ 0.04
SSBP4-215ENST00000625926 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
SSBP4-215ENST00000625926 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
SSBP4-215ENST00000625926 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
SSBP4-215ENST00000625926 TESK2Q96S53 571 aa15.27■□□□□ 0.04
SSBP4-215ENST00000625926 SLC12A5Q9H2X9 1139 aa15.27■□□□□ 0.04
SSBP4-215ENST00000625926 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
SSBP4-215ENST00000625926 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
SSBP4-215ENST00000625926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.26■□□□□ 0.03
SSBP4-215ENST00000625926 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
SSBP4-215ENST00000625926 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
SSBP4-215ENST00000625926 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
SSBP4-215ENST00000625926 CRYBG1Q9Y4K1 1723 aa15.25■□□□□ 0.03
SSBP4-215ENST00000625926 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
SSBP4-215ENST00000625926 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
SSBP4-215ENST00000625926 NRAPQ86VF7 1730 aa15.24■□□□□ 0.03
SSBP4-215ENST00000625926 SOX12O15370 315 aa15.24■□□□□ 0.03
SSBP4-215ENST00000625926 FAM182BQ5T319 152 aa15.24■□□□□ 0.03
SSBP4-215ENST00000625926 DEFB132Q7Z7B7 95 aa15.24■□□□□ 0.03
SSBP4-215ENST00000625926 EP400Q96L91 3159 aa15.24■□□□□ 0.03
SSBP4-215ENST00000625926 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
SSBP4-215ENST00000625926 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
SSBP4-215ENST00000625926 SLIT3O75094 1523 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 BAG6P46379 1132 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 TOM1L2Q6ZVM7 507 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 NME9Q86XW9 330 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
SSBP4-215ENST00000625926 COL5A2P05997 1499 aaPredicted RBP15.21■□□□□ 0.03
SSBP4-215ENST00000625926 TMF1P82094 1093 aa15.21■□□□□ 0.03
SSBP4-215ENST00000625926 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
SSBP4-215ENST00000625926 CRB1P82279 1406 aa15.2■□□□□ 0.02
SSBP4-215ENST00000625926 USP47Q96K76 1375 aa15.2■□□□□ 0.02
SSBP4-215ENST00000625926 NINLQ9Y2I6 1382 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms