RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
NELFE-214ENST00000625905 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
NELFE-214ENST00000625905 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
NELFE-214ENST00000625905 TMF1P82094 1093 aa12.93□□□□□ -0.34
NELFE-214ENST00000625905 C8orf37Q96NL8 207 aa12.93□□□□□ -0.34
NELFE-214ENST00000625905 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
NELFE-214ENST00000625905 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
NELFE-214ENST00000625905 EIF4G2P78344 907 aaKnown RBP eCLIP12.91□□□□□ -0.34
NELFE-214ENST00000625905 TMC1Q8TDI8 760 aa12.91□□□□□ -0.34
NELFE-214ENST00000625905 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
NELFE-214ENST00000625905 PIK3C2AO00443 1686 aa12.91□□□□□ -0.34
NELFE-214ENST00000625905 AFF2P51816 1311 aa12.9□□□□□ -0.34
NELFE-214ENST00000625905 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
NELFE-214ENST00000625905 ZNF772Q68DY9 489 aaPredicted RBP12.9□□□□□ -0.34
NELFE-214ENST00000625905 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
NELFE-214ENST00000625905 RGS17Q9UGC6 210 aaPredicted RBP12.9□□□□□ -0.34
NELFE-214ENST00000625905 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
NELFE-214ENST00000625905 CD163L1Q9NR16 1453 aa12.9□□□□□ -0.34
NELFE-214ENST00000625905 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
NELFE-214ENST00000625905 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
NELFE-214ENST00000625905 NGLY1Q96IV0 654 aa12.89□□□□□ -0.35
NELFE-214ENST00000625905 MYOM1P52179 1685 aa12.89□□□□□ -0.35
NELFE-214ENST00000625905 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
NELFE-214ENST00000625905 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
NELFE-214ENST00000625905 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
NELFE-214ENST00000625905 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
NELFE-214ENST00000625905 A0A1W2PP64 1363 aa12.88□□□□□ -0.35
NELFE-214ENST00000625905 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
NELFE-214ENST00000625905 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
NELFE-214ENST00000625905 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
NELFE-214ENST00000625905 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
NELFE-214ENST00000625905 USP19O94966 1318 aa12.87□□□□□ -0.35
NELFE-214ENST00000625905 TTC21AQ8NDW8 1320 aa12.87□□□□□ -0.35
NELFE-214ENST00000625905 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
NELFE-214ENST00000625905 ANKRD36BQ8N2N9 1353 aa12.86□□□□□ -0.35
NELFE-214ENST00000625905 NWD2Q9ULI1 1742 aa12.86□□□□□ -0.35
NELFE-214ENST00000625905 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
NELFE-214ENST00000625905 SLIT3O75094 1523 aa12.86□□□□□ -0.35
NELFE-214ENST00000625905 SLIT2O94813 1529 aa12.86□□□□□ -0.35
NELFE-214ENST00000625905 TTC21BQ7Z4L5 1316 aa12.86□□□□□ -0.35
NELFE-214ENST00000625905 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
NELFE-214ENST00000625905 ILDR2Q71H61 639 aa12.85□□□□□ -0.35
NELFE-214ENST00000625905 NLRP13Q86W25 1043 aa12.85□□□□□ -0.35
NELFE-214ENST00000625905 USP21Q9UK80 565 aa12.85□□□□□ -0.35
NELFE-214ENST00000625905 USP54Q70EL1 1684 aa12.85□□□□□ -0.35
NELFE-214ENST00000625905 FNBP4Q8N3X1 1017 aaPredicted RBP12.84□□□□□ -0.35
NELFE-214ENST00000625905 NRAPQ86VF7 1730 aa12.84□□□□□ -0.35
NELFE-214ENST00000625905 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
NELFE-214ENST00000625905 NLRP6P59044 892 aa12.83□□□□□ -0.36
NELFE-214ENST00000625905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
NELFE-214ENST00000625905 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
NELFE-214ENST00000625905 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
NELFE-214ENST00000625905 BCL9LQ86UU0 1499 aa12.83□□□□□ -0.36
NELFE-214ENST00000625905 ATRNO75882 1429 aa12.82□□□□□ -0.36
NELFE-214ENST00000625905 TRPC5Q9UL62 973 aaPredicted RBP12.82□□□□□ -0.36
NELFE-214ENST00000625905 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
NELFE-214ENST00000625905 CPDO75976 1380 aa12.81□□□□□ -0.36
NELFE-214ENST00000625905 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
NELFE-214ENST00000625905 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
NELFE-214ENST00000625905 NFAT5O94916 1531 aa12.8□□□□□ -0.36
NELFE-214ENST00000625905 ZC3H6P61129 1189 aaKnown RBP12.8□□□□□ -0.36
NELFE-214ENST00000625905 NME9Q86XW9 330 aa12.8□□□□□ -0.36
NELFE-214ENST00000625905 UNC5CLQ8IV45 518 aa12.8□□□□□ -0.36
NELFE-214ENST00000625905 USP31Q70CQ4 1352 aa12.8□□□□□ -0.36
NELFE-214ENST00000625905 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 FAM83GA6ND36 823 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 GCP02774 474 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 RXRBP28702 533 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
NELFE-214ENST00000625905 RGS12O14924 1447 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 NSD3Q9BZ95 1437 aa12.79□□□□□ -0.36
NELFE-214ENST00000625905 SOX12O15370 315 aa12.78□□□□□ -0.36
NELFE-214ENST00000625905 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
NELFE-214ENST00000625905 CHRNA2Q15822 529 aa12.78□□□□□ -0.36
NELFE-214ENST00000625905 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
NELFE-214ENST00000625905 BTG4Q9NY30 223 aa12.78□□□□□ -0.36
NELFE-214ENST00000625905 GLI3P10071 1580 aa12.77□□□□□ -0.36
NELFE-214ENST00000625905 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
NELFE-214ENST00000625905 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
NELFE-214ENST00000625905 ABCC6O95255 1503 aa12.77□□□□□ -0.37
NELFE-214ENST00000625905 CCDC9Q9Y3X0 531 aaKnown RBP12.76□□□□□ -0.37
NELFE-214ENST00000625905 LTN1O94822 1766 aa12.76□□□□□ -0.37
NELFE-214ENST00000625905 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
NELFE-214ENST00000625905 VPS72Q15906 364 aa12.75□□□□□ -0.37
NELFE-214ENST00000625905 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
NELFE-214ENST00000625905 CAMTA1Q9Y6Y1 1673 aa12.75□□□□□ -0.37
NELFE-214ENST00000625905 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
NELFE-214ENST00000625905 COG3Q96JB2 828 aa12.74□□□□□ -0.37
NELFE-214ENST00000625905 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
NELFE-214ENST00000625905 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
NELFE-214ENST00000625905 COL18A1P39060 1754 aa12.74□□□□□ -0.37
NELFE-214ENST00000625905 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
NELFE-214ENST00000625905 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
NELFE-214ENST00000625905 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
NELFE-214ENST00000625905 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
NELFE-214ENST00000625905 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
NELFE-214ENST00000625905 CCDC7Q96M83 1385 aa12.71□□□□□ -0.37
NELFE-214ENST00000625905 SPATA31A5Q5VU36 1347 aa12.71□□□□□ -0.37
NELFE-214ENST00000625905 SPATA31A7Q8IWB4 1347 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms