RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ST5P78524 1137 aa13.39□□□□□ -0.27
VPS8-227ENST00000625842 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
VPS8-227ENST00000625842 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
VPS8-227ENST00000625842 DENND4BO75064 1496 aaPredicted RBP13.39□□□□□ -0.27
VPS8-227ENST00000625842 DAPK1P53355 1430 aa13.39□□□□□ -0.27
VPS8-227ENST00000625842 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
VPS8-227ENST00000625842 LMTK3Q96Q04 1460 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 EPRSP07814 1512 aaKnown RBP13.38□□□□□ -0.27
VPS8-227ENST00000625842 BAG6P46379 1132 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 AAMPQ13685 434 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 TMEM132EQ6IEE7 984 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
VPS8-227ENST00000625842 HDAC9Q9UKV0 1011 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
VPS8-227ENST00000625842 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 RFC4P35249 363 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 CAVIN4Q5BKX8 364 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
VPS8-227ENST00000625842 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
VPS8-227ENST00000625842 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
VPS8-227ENST00000625842 BICDL1Q6ZP65 573 aa13.37□□□□□ -0.27
VPS8-227ENST00000625842 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
VPS8-227ENST00000625842 TXLNAP40222 546 aa13.37□□□□□ -0.27
VPS8-227ENST00000625842 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
VPS8-227ENST00000625842 PPP4R3AQ6IN85 833 aa13.37□□□□□ -0.27
VPS8-227ENST00000625842 CFTRP13569 1480 aa13.36□□□□□ -0.27
VPS8-227ENST00000625842 EPS15P42566 896 aa13.36□□□□□ -0.27
VPS8-227ENST00000625842 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
VPS8-227ENST00000625842 ANKRD45Q5TZF3 282 aa13.35□□□□□ -0.27
VPS8-227ENST00000625842 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
VPS8-227ENST00000625842 PSMA5P28066 241 aa13.35□□□□□ -0.27
VPS8-227ENST00000625842 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
VPS8-227ENST00000625842 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
VPS8-227ENST00000625842 HMOX1P09601 288 aa13.35□□□□□ -0.27
VPS8-227ENST00000625842 ANO2Q9NQ90 1003 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
VPS8-227ENST00000625842 WDR78Q5VTH9 848 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 GOLGA6L1Q8N7Z2 621 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 USP47Q96K76 1375 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 KIAA0586Q9BVV6 1533 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 B4DLN1 442 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
VPS8-227ENST00000625842 MRPL12P52815 198 aaKnown RBP13.34□□□□□ -0.27
VPS8-227ENST00000625842 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 LDHCP07864 332 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 KRT28Q7Z3Y7 464 aa13.34□□□□□ -0.27
VPS8-227ENST00000625842 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
VPS8-227ENST00000625842 OFD1O75665 1012 aa13.33□□□□□ -0.27
VPS8-227ENST00000625842 C8orf37Q96NL8 207 aa13.33□□□□□ -0.27
VPS8-227ENST00000625842 EHMT1Q9H9B1 1298 aa13.33□□□□□ -0.27
VPS8-227ENST00000625842 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.27
VPS8-227ENST00000625842 WIZO95785 1651 aa13.33□□□□□ -0.27
VPS8-227ENST00000625842 ANKIB1Q9P2G1 1089 aa13.33□□□□□ -0.28
VPS8-227ENST00000625842 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
VPS8-227ENST00000625842 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
VPS8-227ENST00000625842 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
VPS8-227ENST00000625842 TRAF1Q13077 416 aa13.33□□□□□ -0.28
VPS8-227ENST00000625842 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
VPS8-227ENST00000625842 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
VPS8-227ENST00000625842 BECN2A8MW95 431 aa13.32□□□□□ -0.28
VPS8-227ENST00000625842 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
VPS8-227ENST00000625842 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
VPS8-227ENST00000625842 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.284e-6■■■□□ 14.6
VPS8-227ENST00000625842 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
VPS8-227ENST00000625842 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 CFAP70Q5T0N1 1121 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 SYCP1Q15431 976 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
VPS8-227ENST00000625842 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
VPS8-227ENST00000625842 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 DNAJC2Q99543 621 aaKnown RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 FOXO3O43524 673 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 SLKQ9H2G2 1235 aaPredicted RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 RAI14Q9P0K7 980 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 XPCQ01831 940 aaPredicted RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
VPS8-227ENST00000625842 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
VPS8-227ENST00000625842 TNRQ92752 1358 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 ZNF76P36508 570 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 CABP5Q9NP86 173 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 CRBNQ96SW2 442 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
VPS8-227ENST00000625842 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
VPS8-227ENST00000625842 CCDC173Q0VFZ6 552 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms