RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 NUCB1Q02818 461 aa17.25■□□□□ 0.35
UBE3A-209ENST00000625778 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
UBE3A-209ENST00000625778 MYOM1P52179 1685 aa17.25■□□□□ 0.35
UBE3A-209ENST00000625778 TBC1D9Q6ZT07 1266 aa17.25■□□□□ 0.35
UBE3A-209ENST00000625778 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
UBE3A-209ENST00000625778 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
UBE3A-209ENST00000625778 GGT6Q6P531 493 aa17.24■□□□□ 0.35
UBE3A-209ENST00000625778 PTPRTO14522 1441 aa17.24■□□□□ 0.35
UBE3A-209ENST00000625778 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
UBE3A-209ENST00000625778 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
UBE3A-209ENST00000625778 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
UBE3A-209ENST00000625778 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
UBE3A-209ENST00000625778 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
UBE3A-209ENST00000625778 STAC3Q96MF2 364 aa17.23■□□□□ 0.35
UBE3A-209ENST00000625778 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
UBE3A-209ENST00000625778 NOS1P29475 1434 aa17.22■□□□□ 0.35
UBE3A-209ENST00000625778 SNX21Q969T3 373 aa17.21■□□□□ 0.35
UBE3A-209ENST00000625778 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
UBE3A-209ENST00000625778 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.34
UBE3A-209ENST00000625778 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
UBE3A-209ENST00000625778 KIF2CQ99661 725 aa17.2■□□□□ 0.34
UBE3A-209ENST00000625778 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 XPCQ01831 940 aaPredicted RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 MPNDQ8N594 471 aa17.2■□□□□ 0.34
UBE3A-209ENST00000625778 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
UBE3A-209ENST00000625778 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
UBE3A-209ENST00000625778 HMOX1P09601 288 aa17.19■□□□□ 0.34
UBE3A-209ENST00000625778 FGD1P98174 961 aa17.19■□□□□ 0.34
UBE3A-209ENST00000625778 PKP1Q13835 747 aa17.19■□□□□ 0.34
UBE3A-209ENST00000625778 ZSCAN30Q86W11 494 aa17.19■□□□□ 0.34
UBE3A-209ENST00000625778 DDIT3P35638 169 aa17.19■□□□□ 0.34
UBE3A-209ENST00000625778 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
UBE3A-209ENST00000625778 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
UBE3A-209ENST00000625778 TPM2P07951 284 aa17.18■□□□□ 0.34
UBE3A-209ENST00000625778 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
UBE3A-209ENST00000625778 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
UBE3A-209ENST00000625778 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
UBE3A-209ENST00000625778 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
UBE3A-209ENST00000625778 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
UBE3A-209ENST00000625778 IQSEC2Q5JU85 1478 aa17.17■□□□□ 0.34
UBE3A-209ENST00000625778 ZNF518AQ6AHZ1 1483 aa17.17■□□□□ 0.34
UBE3A-209ENST00000625778 CEP152O94986 1710 aa17.17■□□□□ 0.34
UBE3A-209ENST00000625778 TRPM2O94759 1503 aa17.17■□□□□ 0.34
UBE3A-209ENST00000625778 ATAD2Q6PL18 1390 aa17.17■□□□□ 0.34
UBE3A-209ENST00000625778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■□□ 16.5
UBE3A-209ENST00000625778 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
UBE3A-209ENST00000625778 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
UBE3A-209ENST00000625778 PLCH2O75038 1416 aa17.16■□□□□ 0.34
UBE3A-209ENST00000625778 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
UBE3A-209ENST00000625778 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
UBE3A-209ENST00000625778 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
UBE3A-209ENST00000625778 PRKAR2BP31323 418 aa17.15■□□□□ 0.34
UBE3A-209ENST00000625778 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
UBE3A-209ENST00000625778 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
UBE3A-209ENST00000625778 CDC45O75419 566 aa17.13■□□□□ 0.33
UBE3A-209ENST00000625778 KLHL40Q2TBA0 621 aa17.13■□□□□ 0.33
UBE3A-209ENST00000625778 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
UBE3A-209ENST00000625778 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
UBE3A-209ENST00000625778 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
UBE3A-209ENST00000625778 RBSNQ9H1K0 784 aa17.13■□□□□ 0.33
UBE3A-209ENST00000625778 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
UBE3A-209ENST00000625778 PRIM1P49642 420 aaKnown RBP17.13■□□□□ 0.33
UBE3A-209ENST00000625778 PTMSP20962 102 aa17.12■□□□□ 0.33
UBE3A-209ENST00000625778 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
UBE3A-209ENST00000625778 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
UBE3A-209ENST00000625778 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 BBXQ8WY36 941 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 C14orf93Q9H972 538 aaKnown RBP17.11■□□□□ 0.33
UBE3A-209ENST00000625778 SYCE3A1L190 88 aa17.1■□□□□ 0.33
UBE3A-209ENST00000625778 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
UBE3A-209ENST00000625778 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
UBE3A-209ENST00000625778 GSPT1P15170 499 aaKnown RBP17.1■□□□□ 0.33
UBE3A-209ENST00000625778 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
UBE3A-209ENST00000625778 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
UBE3A-209ENST00000625778 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
UBE3A-209ENST00000625778 UQCRHLA0A096LP55 91 aa17.09■□□□□ 0.33
UBE3A-209ENST00000625778 OFD1O75665 1012 aa17.09■□□□□ 0.33
UBE3A-209ENST00000625778 UQCRHP07919 91 aa17.09■□□□□ 0.33
UBE3A-209ENST00000625778 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
UBE3A-209ENST00000625778 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
UBE3A-209ENST00000625778 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.33
UBE3A-209ENST00000625778 ABCC11Q96J66 1382 aa17.08■□□□□ 0.32
UBE3A-209ENST00000625778 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
UBE3A-209ENST00000625778 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
UBE3A-209ENST00000625778 FYB1O15117 783 aa17.07■□□□□ 0.32
UBE3A-209ENST00000625778 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
UBE3A-209ENST00000625778 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
UBE3A-209ENST00000625778 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
UBE3A-209ENST00000625778 LMBRD1Q9NUN5 540 aa17.06■□□□□ 0.32
UBE3A-209ENST00000625778 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
UBE3A-209ENST00000625778 NUCB2P80303 420 aa17.06■□□□□ 0.32
UBE3A-209ENST00000625778 RABEP1Q15276 862 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms