RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-208	ENST00000625681	WASL	O00401	505 aa	Predicted RBP	33.31	■■■□□ 2.92
UBE3A-208	ENST00000625681	R3HDM1	Q15032	1099 aa	Known RBP	33.31	■■■□□ 2.92
UBE3A-208	ENST00000625681	PRDM11	Q9NQV5	511 aa		33.3	■■■□□ 2.92
UBE3A-208	ENST00000625681	NRAP	Q86VF7	1730 aa		33.28	■■■□□ 2.92
UBE3A-208	ENST00000625681	LRP5	O75197	1615 aa		33.28	■■■□□ 2.92
UBE3A-208	ENST00000625681	ADGRB1	O14514	1584 aa		33.26	■■■□□ 2.92
UBE3A-208	ENST00000625681	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.26	■■■□□ 2.92
UBE3A-208	ENST00000625681	EZH2	Q15910	746 aa	Known RBP	33.26	■■■□□ 2.91
UBE3A-208	ENST00000625681	DCAF11	Q8TEB1	546 aa		33.25	■■■□□ 2.91
UBE3A-208	ENST00000625681	CHRNA2	Q15822	529 aa		33.24	■■■□□ 2.91
UBE3A-208	ENST00000625681	ADGRB2	O60241	1585 aa		33.24	■■■□□ 2.91
UBE3A-208	ENST00000625681	COL14A1	Q05707	1796 aa	Known RBP	33.23	■■■□□ 2.91
UBE3A-208	ENST00000625681	STRN4	Q9NRL3	753 aa		33.22	■■■□□ 2.91
UBE3A-208	ENST00000625681	EIF3A	Q14152	1382 aa	Known RBP	33.21	■■■□□ 2.91
UBE3A-208	ENST00000625681	TRIM37	O94972	964 aa		33.21	■■■□□ 2.91
UBE3A-208	ENST00000625681	NUTM2G	Q5VZR2	741 aa		33.21	■■■□□ 2.91
UBE3A-208	ENST00000625681	ALS2	Q96Q42	1657 aa		33.2	■■■□□ 2.91
UBE3A-208	ENST00000625681	SPATA31A1	Q5TZJ5	1347 aa		33.2	■■■□□ 2.91
UBE3A-208	ENST00000625681	KIAA0232	Q92628	1395 aa		33.2	■■■□□ 2.9
UBE3A-208	ENST00000625681	TULP4	Q9NRJ4	1543 aa		33.19	■■■□□ 2.9
UBE3A-208	ENST00000625681	ZC3H6	P61129	1189 aa	Known RBP	33.19	■■■□□ 2.9
UBE3A-208	ENST00000625681	NUDT16	Q96DE0	195 aa	Known RBP	33.18	■■■□□ 2.9
UBE3A-208	ENST00000625681	CAMKK2	Q96RR4	588 aa		33.17	■■■□□ 2.9
UBE3A-208	ENST00000625681	USP35	Q9P2H5	1018 aa		33.17	■■■□□ 2.9
UBE3A-208	ENST00000625681	FAM196A	Q6ZSG2	479 aa		33.15	■■■□□ 2.9
UBE3A-208	ENST00000625681	RAB3GAP2	Q9H2M9	1393 aa		33.15	■■■□□ 2.9
UBE3A-208	ENST00000625681	DISP2	A7MBM2	1401 aa		33.13	■■■□□ 2.89
UBE3A-208	ENST00000625681	APBA3	O96018	575 aa		33.13	■■■□□ 2.89
UBE3A-208	ENST00000625681	THSD7A	Q9UPZ6	1657 aa		33.12	■■■□□ 2.89
UBE3A-208	ENST00000625681	EVA1C	P58658	441 aa		33.1	■■■□□ 2.89
UBE3A-208	ENST00000625681	CDK19	Q9BWU1	502 aa		33.1	■■■□□ 2.89
UBE3A-208	ENST00000625681	RGPD1	P0DJD0	1748 aa		33.1	■■■□□ 2.89
UBE3A-208	ENST00000625681	PDE3B	Q13370	1112 aa		33.06	■■■□□ 2.88
UBE3A-208	ENST00000625681	ATP7B	P35670	1465 aa		33.05	■■■□□ 2.88
UBE3A-208	ENST00000625681	CRYBG1	Q9Y4K1	1723 aa		33.05	■■■□□ 2.88
UBE3A-208	ENST00000625681	NBPF8	Q3BBV2	869 aa		33.05	■■■□□ 2.88
UBE3A-208	ENST00000625681	ACE	P12821	1306 aa		33.04	■■■□□ 2.88
UBE3A-208	ENST00000625681	LARP1	Q6PKG0	1096 aa	Known RBP	33.04	■■■□□ 2.88
UBE3A-208	ENST00000625681	TNS1	Q9HBL0	1735 aa	Known RBP	33.02	■■■□□ 2.88
UBE3A-208	ENST00000625681	BARGIN	Q6ZT62	677 aa		33.01	■■■□□ 2.87
UBE3A-208	ENST00000625681	ABTB2	Q8N961	1025 aa		33.01	■■■□□ 2.87
UBE3A-208	ENST00000625681	STAC3	Q96MF2	364 aa		33.01	■■■□□ 2.87
UBE3A-208	ENST00000625681	CCDC61	Q9Y6R9	512 aa		32.99	■■■□□ 2.87
UBE3A-208	ENST00000625681	SSH2	Q76I76	1423 aa		32.98	■■■□□ 2.87
UBE3A-208	ENST00000625681	TCP11L2	Q8N4U5	519 aa		32.97	■■■□□ 2.87
UBE3A-208	ENST00000625681	POLR3A	O14802	1390 aa	Predicted RBP	32.96	■■■□□ 2.87
UBE3A-208	ENST00000625681	PARD3	Q8TEW0	1356 aa		32.96	■■■□□ 2.87
UBE3A-208	ENST00000625681	PLEKHG3	A1L390	1219 aa		32.95	■■■□□ 2.87
UBE3A-208	ENST00000625681	NBPF14	Q5TI25	921 aa		32.93	■■■□□ 2.86
UBE3A-208	ENST00000625681	CAMTA1	Q9Y6Y1	1673 aa		32.93	■■■□□ 2.86
UBE3A-208	ENST00000625681	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.92	■■■□□ 2.86
UBE3A-208	ENST00000625681	GC	P02774	474 aa		32.89	■■■□□ 2.86
UBE3A-208	ENST00000625681	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.88	■■■□□ 2.85
UBE3A-208	ENST00000625681	CPD	O75976	1380 aa		32.88	■■■□□ 2.85
UBE3A-208	ENST00000625681	USP19	O94966	1318 aa		32.87	■■■□□ 2.85
UBE3A-208	ENST00000625681	ZBTB7C	A1YPR0	619 aa		32.87	■■■□□ 2.85
UBE3A-208	ENST00000625681	NBPF1	Q3BBV0	1214 aa		32.87	■■■□□ 2.85
UBE3A-208	ENST00000625681	ITSN1	Q15811	1721 aa		32.86	■■■□□ 2.85
UBE3A-208	ENST00000625681	NLRP13	Q86W25	1043 aa		32.86	■■■□□ 2.85
UBE3A-208	ENST00000625681	SRPK2	P78362	688 aa	Known RBP	32.85	■■■□□ 2.85
UBE3A-208	ENST00000625681	THRAP3	Q9Y2W1	955 aa	Known RBP	32.85	■■■□□ 2.85
UBE3A-208	ENST00000625681	YY1	P25490	414 aa		32.84	■■■□□ 2.85
UBE3A-208	ENST00000625681	CABP2	Q9NPB3	220 aa		32.83	■■■□□ 2.85
UBE3A-208	ENST00000625681	NRK	Q7Z2Y5	1582 aa		32.83	■■■□□ 2.85
UBE3A-208	ENST00000625681	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.82	■■■□□ 2.84
UBE3A-208	ENST00000625681	SPON1	Q9HCB6	807 aa		32.81	■■■□□ 2.84
UBE3A-208	ENST00000625681	KCNQ2	O43526	872 aa		32.8	■■■□□ 2.84
UBE3A-208	ENST00000625681	PPIP5K1	Q6PFW1	1433 aa		32.78	■■■□□ 2.84
UBE3A-208	ENST00000625681	COL5A2	P05997	1499 aa	Predicted RBP	32.77	■■■□□ 2.84
UBE3A-208	ENST00000625681	LMO7	Q8WWI1	1683 aa		32.77	■■■□□ 2.84
UBE3A-208	ENST00000625681	TOPAZ1	Q8N9V7	1692 aa		32.76	■■■□□ 2.84
UBE3A-208	ENST00000625681	RREB1	Q92766	1687 aa		32.76	■■■□□ 2.84
UBE3A-208	ENST00000625681	PTF1A	Q7RTS3	328 aa		32.76	■■■□□ 2.83
UBE3A-208	ENST00000625681	NUP188	Q5SRE5	1749 aa		32.75	■■■□□ 2.83
UBE3A-208	ENST00000625681	NLRP6	P59044	892 aa		32.75	■■■□□ 2.83
UBE3A-208	ENST00000625681	CABP1	Q9NZU7	370 aa		32.75	■■■□□ 2.83
UBE3A-208	ENST00000625681	CRB1	P82279	1406 aa		32.73	■■■□□ 2.83
UBE3A-208	ENST00000625681	DDB1	Q16531	1140 aa		32.72	■■■□□ 2.83
UBE3A-208	ENST00000625681	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.72	■■■□□ 2.83
UBE3A-208	ENST00000625681	TOM1L2	Q6ZVM7	507 aa		32.71	■■■□□ 2.83
UBE3A-208	ENST00000625681	C11orf95	C9JLR9	678 aa	Predicted RBP	32.7	■■■□□ 2.83
UBE3A-208	ENST00000625681	PLSCR1	O15162	318 aa		32.69	■■■□□ 2.82
UBE3A-208	ENST00000625681	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.69	■■■□□ 2.82
UBE3A-208	ENST00000625681	AXIN2	Q9Y2T1	843 aa		32.69	■■■□□ 2.82
UBE3A-208	ENST00000625681	OVOS2	A0A0G2JMS6	1433 aa		32.68	■■■□□ 2.82
UBE3A-208	ENST00000625681	OVOS2	A0A0J9YW53	1432 aa		32.68	■■■□□ 2.82
UBE3A-208	ENST00000625681	OVOS2	Q6IE36	1432 aa		32.68	■■■□□ 2.82
UBE3A-208	ENST00000625681	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.68	■■■□□ 2.82
UBE3A-208	ENST00000625681	AATK	Q6ZMQ8	1374 aa		32.68	■■■□□ 2.82
UBE3A-208	ENST00000625681	DCAF8L1	A6NGE4	600 aa		32.66	■■■□□ 2.82
UBE3A-208	ENST00000625681	PROM2	Q8N271	834 aa		32.66	■■■□□ 2.82
UBE3A-208	ENST00000625681	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.66	■■■□□ 2.82
UBE3A-208	ENST00000625681	MARCH10	Q8NA82	808 aa	Predicted RBP	32.65	■■■□□ 2.82
UBE3A-208	ENST00000625681	PARP4	Q9UKK3	1724 aa	Known RBP	32.63	■■■□□ 2.81
UBE3A-208	ENST00000625681	USP6	P35125	1406 aa		32.63	■■■□□ 2.81
UBE3A-208	ENST00000625681	BRD4	O60885	1362 aa	Predicted RBP	32.62	■■■□□ 2.81
UBE3A-208	ENST00000625681	NINL	Q9Y2I6	1382 aa		32.61	■■■□□ 2.81
UBE3A-208	ENST00000625681	ZBTB7A	O95365	584 aa		32.61	■■■□□ 2.81
UBE3A-208	ENST00000625681	SOX12	O15370	315 aa		32.6	■■■□□ 2.81
UBE3A-208	ENST00000625681	WDR17	Q8IZU2	1322 aa		32.59	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms