RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 MSH5O43196 834 aa24.45■■□□□ 1.5
PCDHB2-202ENST00000622947 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
PCDHB2-202ENST00000622947 NKTRP30414 1462 aaKnown RBP24.45■■□□□ 1.5
PCDHB2-202ENST00000622947 PIK3R4Q99570 1358 aa24.45■■□□□ 1.5
PCDHB2-202ENST00000622947 RGPD8O14715 1765 aaPredicted RBP24.45■■□□□ 1.5
PCDHB2-202ENST00000622947 NME9Q86XW9 330 aa24.44■■□□□ 1.5
PCDHB2-202ENST00000622947 COL3A1P02461 1466 aaPredicted RBP24.44■■□□□ 1.5
PCDHB2-202ENST00000622947 RNF123Q5XPI4 1314 aa24.44■■□□□ 1.5
PCDHB2-202ENST00000622947 CFAP53Q96M91 514 aa24.42■■□□□ 1.5
PCDHB2-202ENST00000622947 PLEKHG3A1L390 1219 aa24.41■■□□□ 1.5
PCDHB2-202ENST00000622947 ACEP12821 1306 aa24.41■■□□□ 1.5
PCDHB2-202ENST00000622947 MAP2P11137 1827 aaKnown RBP24.4■■□□□ 1.5
PCDHB2-202ENST00000622947 NRKQ7Z2Y5 1582 aa24.4■■□□□ 1.5
PCDHB2-202ENST00000622947 ZNF692Q9BU19 519 aaPredicted RBP24.38■■□□□ 1.49
PCDHB2-202ENST00000622947 PNPLA6Q8IY17 1366 aa24.37■■□□□ 1.49
PCDHB2-202ENST00000622947 FANCIQ9NVI1 1328 aa24.37■■□□□ 1.49
PCDHB2-202ENST00000622947 POLKQ9UBT6 870 aa24.37■■□□□ 1.49
PCDHB2-202ENST00000622947 RBM33Q96EV2 1170 aaKnown RBP24.36■■□□□ 1.49
PCDHB2-202ENST00000622947 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
PCDHB2-202ENST00000622947 IQSEC2Q5JU85 1478 aa24.35■■□□□ 1.49
PCDHB2-202ENST00000622947 SPINK5Q9NQ38 1064 aaPredicted RBP24.35■■□□□ 1.49
PCDHB2-202ENST00000622947 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
PCDHB2-202ENST00000622947 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
PCDHB2-202ENST00000622947 USP6P35125 1406 aa24.34■■□□□ 1.49
PCDHB2-202ENST00000622947 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
PCDHB2-202ENST00000622947 PMFBP1Q8TBY8 1022 aa24.34■■□□□ 1.49
PCDHB2-202ENST00000622947 RUNDC1Q96C34 613 aa24.34■■□□□ 1.49
PCDHB2-202ENST00000622947 TTC21BQ7Z4L5 1316 aa24.33■■□□□ 1.49
PCDHB2-202ENST00000622947 U2AF1L5P0DN76 240 aaPredicted RBP24.33■■□□□ 1.49
PCDHB2-202ENST00000622947 U2AF1Q01081 240 aaKnown RBP eCLIP24.33■■□□□ 1.49
PCDHB2-202ENST00000622947 RCAN3Q9UKA8 241 aa24.33■■□□□ 1.49
PCDHB2-202ENST00000622947 SSH2Q76I76 1423 aa24.32■■□□□ 1.48
PCDHB2-202ENST00000622947 FMN2Q9NZ56 1722 aa24.32■■□□□ 1.48
PCDHB2-202ENST00000622947 GOLGA2Q08379 1002 aa24.32■■□□□ 1.48
PCDHB2-202ENST00000622947 ERICH6BQ5W0A0 696 aa24.32■■□□□ 1.48
PCDHB2-202ENST00000622947 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
PCDHB2-202ENST00000622947 EMILIN1Q9Y6C2 1016 aa24.31■■□□□ 1.48
PCDHB2-202ENST00000622947 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
PCDHB2-202ENST00000622947 SLFN5Q08AF3 891 aa24.3■■□□□ 1.48
PCDHB2-202ENST00000622947 COG3Q96JB2 828 aa24.3■■□□□ 1.48
PCDHB2-202ENST00000622947 PPM1GO15355 546 aaPredicted RBP24.29■■□□□ 1.48
PCDHB2-202ENST00000622947 TRMT2AQ8IZ69 625 aaKnown RBP24.29■■□□□ 1.48
PCDHB2-202ENST00000622947 U2SURPO15042 1029 aaKnown RBP24.29■■□□□ 1.48
PCDHB2-202ENST00000622947 WWC1Q8IX03 1113 aa24.28■■□□□ 1.48
PCDHB2-202ENST00000622947 AATKQ6ZMQ8 1374 aa24.28■■□□□ 1.48
PCDHB2-202ENST00000622947 DIAPH1O60610 1272 aaKnown RBP24.27■■□□□ 1.48
PCDHB2-202ENST00000622947 NEUROD2Q15784 382 aa24.27■■□□□ 1.48
PCDHB2-202ENST00000622947 PLEKHF1Q96S99 279 aa24.27■■□□□ 1.48
PCDHB2-202ENST00000622947 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
PCDHB2-202ENST00000622947 RRS1Q15050 365 aaKnown RBP24.26■■□□□ 1.47
PCDHB2-202ENST00000622947 OVOS2A0A0J9YW53 1432 aa24.26■■□□□ 1.47
PCDHB2-202ENST00000622947 OVOS2Q6IE36 1432 aa24.26■■□□□ 1.47
PCDHB2-202ENST00000622947 ANKARQ7Z5J8 1434 aa24.26■■□□□ 1.47
PCDHB2-202ENST00000622947 RRP1P56182 461 aaKnown RBP24.25■■□□□ 1.47
PCDHB2-202ENST00000622947 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
PCDHB2-202ENST00000622947 NGDNQ8NEJ9 315 aaKnown RBP24.23■■□□□ 1.47
PCDHB2-202ENST00000622947 CDK12Q9NYV4 1490 aaPredicted RBP24.22■■□□□ 1.47
PCDHB2-202ENST00000622947 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
PCDHB2-202ENST00000622947 NWD1Q149M9 1564 aa24.21■■□□□ 1.47
PCDHB2-202ENST00000622947 ADGRL3Q9HAR2 1447 aa24.21■■□□□ 1.47
PCDHB2-202ENST00000622947 IL13P35225 146 aa24.19■■□□□ 1.46
PCDHB2-202ENST00000622947 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
PCDHB2-202ENST00000622947 E9PSI1 815 aa24.19■■□□□ 1.46
PCDHB2-202ENST00000622947 USP31Q70CQ4 1352 aa24.18■■□□□ 1.46
PCDHB2-202ENST00000622947 PLIN1O60240 522 aa24.18■■□□□ 1.46
PCDHB2-202ENST00000622947 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
PCDHB2-202ENST00000622947 TTC21AQ8NDW8 1320 aa24.17■■□□□ 1.46
PCDHB2-202ENST00000622947 KDM4FA0A1W2PPD8 638 aa24.17■■□□□ 1.46
PCDHB2-202ENST00000622947 CCDC27Q2M243 656 aa24.17■■□□□ 1.46
PCDHB2-202ENST00000622947 DEKP35659 375 aaKnown RBP24.16■■□□□ 1.46
PCDHB2-202ENST00000622947 PEAK1Q9H792 1746 aa24.16■■□□□ 1.46
PCDHB2-202ENST00000622947 B4GALNT3Q6L9W6 998 aa24.16■■□□□ 1.46
PCDHB2-202ENST00000622947 RSPH6AQ9H0K4 717 aa24.16■■□□□ 1.46
PCDHB2-202ENST00000622947 TMPOP42166 694 aaKnown RBP24.15■■□□□ 1.46
PCDHB2-202ENST00000622947 HSPA2P54652 639 aa24.15■■□□□ 1.46
PCDHB2-202ENST00000622947 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
PCDHB2-202ENST00000622947 FCHSD2O94868 740 aa24.14■■□□□ 1.45
PCDHB2-202ENST00000622947 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.45
PCDHB2-202ENST00000622947 HMOX1P09601 288 aa24.13■■□□□ 1.45
PCDHB2-202ENST00000622947 TRIM35Q9UPQ4 493 aa24.13■■□□□ 1.45
PCDHB2-202ENST00000622947 STRCP1A6NGW2 1772 aa24.13■■□□□ 1.45
PCDHB2-202ENST00000622947 SOX12O15370 315 aa24.12■■□□□ 1.45
PCDHB2-202ENST00000622947 WDR63Q8IWG1 891 aa24.12■■□□□ 1.45
PCDHB2-202ENST00000622947 PHF8Q9UPP1 1060 aa24.12■■□□□ 1.45
PCDHB2-202ENST00000622947 PRKAR2BP31323 418 aa24.11■■□□□ 1.45
PCDHB2-202ENST00000622947 MAPK8IP3Q9UPT6 1336 aa24.1■■□□□ 1.45
PCDHB2-202ENST00000622947 EXOC6Q8TAG9 804 aa24.1■■□□□ 1.45
PCDHB2-202ENST00000622947 PHACTR3Q96KR7 559 aa24.1■■□□□ 1.45
PCDHB2-202ENST00000622947 C14orf37Q86TY3 774 aa24.09■■□□□ 1.45
PCDHB2-202ENST00000622947 PROSER2Q86WR7 435 aaPredicted RBP24.09■■□□□ 1.45
PCDHB2-202ENST00000622947 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
PCDHB2-202ENST00000622947 EIF4A2Q14240 407 aaKnown RBP24.08■■□□□ 1.45
PCDHB2-202ENST00000622947 HSP90AB2PQ58FF8 381 aa24.08■■□□□ 1.45
PCDHB2-202ENST00000622947 ESCO1Q5FWF5 840 aa24.07■■□□□ 1.44
PCDHB2-202ENST00000622947 C20orf194Q5TEA3 1177 aa24.07■■□□□ 1.44
PCDHB2-202ENST00000622947 MAP3K19Q56UN5 1328 aa24.07■■□□□ 1.44
PCDHB2-202ENST00000622947 RIPK4P57078 832 aa24.06■■□□□ 1.44
PCDHB2-202ENST00000622947 NLRP6P59044 892 aa24.06■■□□□ 1.44
PCDHB2-202ENST00000622947 ORAI2Q96SN7 254 aa24.06■■□□□ 1.44
PCDHB2-202ENST00000622947 USP54Q70EL1 1684 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms