RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 SSH2Q76I76 1423 aa19.19■□□□□ 0.66
CLTCL1-212ENST00000622493 ESCO1Q5FWF5 840 aa19.18■□□□□ 0.66
CLTCL1-212ENST00000622493 GGNBP2Q9H3C7 697 aa19.18■□□□□ 0.66
CLTCL1-212ENST00000622493 TTC21BQ7Z4L5 1316 aa19.18■□□□□ 0.66
CLTCL1-212ENST00000622493 TTC21AQ8NDW8 1320 aa19.18■□□□□ 0.66
CLTCL1-212ENST00000622493 C1orf167Q5SNV9 1468 aa19.17■□□□□ 0.66
CLTCL1-212ENST00000622493 MST1RQ04912 1400 aa19.16■□□□□ 0.66
CLTCL1-212ENST00000622493 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
CLTCL1-212ENST00000622493 KIF1AQ12756 1690 aa19.15■□□□□ 0.66
CLTCL1-212ENST00000622493 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.65
CLTCL1-212ENST00000622493 NME9Q86XW9 330 aa19.13■□□□□ 0.65
CLTCL1-212ENST00000622493 COG3Q96JB2 828 aa19.13■□□□□ 0.65
CLTCL1-212ENST00000622493 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
CLTCL1-212ENST00000622493 ORAI2Q96SN7 254 aa19.12■□□□□ 0.65
CLTCL1-212ENST00000622493 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
CLTCL1-212ENST00000622493 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
CLTCL1-212ENST00000622493 PSME1Q06323 249 aa19.1■□□□□ 0.65
CLTCL1-212ENST00000622493 USP31Q70CQ4 1352 aa19.09■□□□□ 0.65
CLTCL1-212ENST00000622493 AATKQ6ZMQ8 1374 aa19.09■□□□□ 0.65
CLTCL1-212ENST00000622493 OVOS2A0A0J9YW53 1432 aa19.09■□□□□ 0.65
CLTCL1-212ENST00000622493 OVOS2Q6IE36 1432 aa19.09■□□□□ 0.65
CLTCL1-212ENST00000622493 MTHFSP49914 203 aa19.08■□□□□ 0.64
CLTCL1-212ENST00000622493 INSRP06213 1382 aa19.07■□□□□ 0.64
CLTCL1-212ENST00000622493 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
CLTCL1-212ENST00000622493 FOXO3O43524 673 aa19.07■□□□□ 0.64
CLTCL1-212ENST00000622493 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
CLTCL1-212ENST00000622493 USP54Q70EL1 1684 aa19.06■□□□□ 0.64
CLTCL1-212ENST00000622493 SLAIN2Q9P270 581 aa19.05■□□□□ 0.64
CLTCL1-212ENST00000622493 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
CLTCL1-212ENST00000622493 PIK3C2AO00443 1686 aa19.05■□□□□ 0.64
CLTCL1-212ENST00000622493 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
CLTCL1-212ENST00000622493 ABTB2Q8N961 1025 aa19.04■□□□□ 0.64
CLTCL1-212ENST00000622493 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
CLTCL1-212ENST00000622493 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
CLTCL1-212ENST00000622493 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
CLTCL1-212ENST00000622493 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
CLTCL1-212ENST00000622493 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
CLTCL1-212ENST00000622493 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
CLTCL1-212ENST00000622493 SMG6Q86US8 1419 aaKnown RBP19.02■□□□□ 0.64
CLTCL1-212ENST00000622493 PNPLA6Q8IY17 1366 aa19.02■□□□□ 0.64
CLTCL1-212ENST00000622493 NLRP6P59044 892 aa19.02■□□□□ 0.63
CLTCL1-212ENST00000622493 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
CLTCL1-212ENST00000622493 BRINP3Q76B58 766 aa19■□□□□ 0.63
CLTCL1-212ENST00000622493 HNRNPUQ00839 825 aaKnown RBP eCLIP19■□□□□ 0.63
CLTCL1-212ENST00000622493 SBNO1A3KN83 1393 aa18.98■□□□□ 0.63
CLTCL1-212ENST00000622493 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
CLTCL1-212ENST00000622493 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
CLTCL1-212ENST00000622493 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
CLTCL1-212ENST00000622493 BLMP54132 1417 aaPredicted RBP18.97■□□□□ 0.63
CLTCL1-212ENST00000622493 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
CLTCL1-212ENST00000622493 SHPRHQ149N8 1683 aa18.97■□□□□ 0.63
CLTCL1-212ENST00000622493 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
CLTCL1-212ENST00000622493 FBLN1P23142 703 aa18.96■□□□□ 0.63
CLTCL1-212ENST00000622493 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
CLTCL1-212ENST00000622493 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
CLTCL1-212ENST00000622493 PXDNQ92626 1479 aa18.96■□□□□ 0.63
CLTCL1-212ENST00000622493 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
CLTCL1-212ENST00000622493 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
CLTCL1-212ENST00000622493 DIAPH1O60610 1272 aaKnown RBP18.94■□□□□ 0.62
CLTCL1-212ENST00000622493 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
CLTCL1-212ENST00000622493 NUTM2GQ5VZR2 741 aa18.94■□□□□ 0.62
CLTCL1-212ENST00000622493 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
CLTCL1-212ENST00000622493 ALS2Q96Q42 1657 aa18.94■□□□□ 0.62
CLTCL1-212ENST00000622493 SOS2Q07890 1332 aaPredicted RBP18.93■□□□□ 0.62
CLTCL1-212ENST00000622493 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
CLTCL1-212ENST00000622493 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
CLTCL1-212ENST00000622493 DDX17Q92841 729 aaKnown RBP18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 USP19O94966 1318 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 MAP3K19Q56UN5 1328 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 SPATA31A3Q5VYP0 1347 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 SLIT3O75094 1523 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 ARHGEF10O15013 1369 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 MYT1Q01538 1121 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
CLTCL1-212ENST00000622493 NHSL1Q5SYE7 1610 aa18.9■□□□□ 0.62
CLTCL1-212ENST00000622493 FLT4P35916 1363 aa18.9■□□□□ 0.62
CLTCL1-212ENST00000622493 SOX12O15370 315 aa18.89■□□□□ 0.61
CLTCL1-212ENST00000622493 IQSEC2Q5JU85 1478 aa18.89■□□□□ 0.61
CLTCL1-212ENST00000622493 NFAT5O94916 1531 aa18.88■□□□□ 0.61
CLTCL1-212ENST00000622493 GCP02774 474 aa18.88■□□□□ 0.61
CLTCL1-212ENST00000622493 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
CLTCL1-212ENST00000622493 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
CLTCL1-212ENST00000622493 AMPHP49418 695 aa18.88■□□□□ 0.61
CLTCL1-212ENST00000622493 RTL1A6NKG5 1358 aa18.88■□□□□ 0.61
CLTCL1-212ENST00000622493 TOM1O60784 492 aa18.87■□□□□ 0.61
CLTCL1-212ENST00000622493 IL13P35225 146 aa18.87■□□□□ 0.61
CLTCL1-212ENST00000622493 PNNQ9H307 717 aaKnown RBP18.87■□□□□ 0.61
CLTCL1-212ENST00000622493 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
CLTCL1-212ENST00000622493 U2SURPO15042 1029 aaKnown RBP18.86■□□□□ 0.61
CLTCL1-212ENST00000622493 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
CLTCL1-212ENST00000622493 ROBO1Q9Y6N7 1651 aa18.86■□□□□ 0.61
CLTCL1-212ENST00000622493 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
CLTCL1-212ENST00000622493 MED1Q15648 1581 aaPredicted RBP18.85■□□□□ 0.61
CLTCL1-212ENST00000622493 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
CLTCL1-212ENST00000622493 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
CLTCL1-212ENST00000622493 LTN1O94822 1766 aa18.84■□□□□ 0.61
CLTCL1-212ENST00000622493 FCHSD2O94868 740 aa18.84■□□□□ 0.61
CLTCL1-212ENST00000622493 AHDC1Q5TGY3 1603 aaPredicted RBP18.84■□□□□ 0.61
CLTCL1-212ENST00000622493 HOXC9P31274 260 aa18.83■□□□□ 0.61
CLTCL1-212ENST00000622493 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms