RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.61■■■□□ 2.33
NKX2-3-202ENST00000622383 BACH2Q9BYV9 841 aa29.61■■■□□ 2.33
NKX2-3-202ENST00000622383 CPSF1Q10570 1443 aaKnown RBP29.6■■■□□ 2.33
NKX2-3-202ENST00000622383 UBR1Q8IWV7 1749 aa29.59■■■□□ 2.33
NKX2-3-202ENST00000622383 DIAPH1O60610 1272 aaKnown RBP29.59■■■□□ 2.33
NKX2-3-202ENST00000622383 KNDC1Q76NI1 1749 aa29.58■■■□□ 2.33
NKX2-3-202ENST00000622383 PPIP5K1Q6PFW1 1433 aa29.58■■■□□ 2.33
NKX2-3-202ENST00000622383 MYH16Q9H6N6 1097 aa29.57■■■□□ 2.32
NKX2-3-202ENST00000622383 TMPOP42166 694 aaKnown RBP29.57■■■□□ 2.32
NKX2-3-202ENST00000622383 CPS1P31327 1500 aa29.56■■■□□ 2.32
NKX2-3-202ENST00000622383 ANP32AP39687 249 aaKnown RBP29.55■■■□□ 2.32
NKX2-3-202ENST00000622383 POLKQ9UBT6 870 aa29.55■■■□□ 2.32
NKX2-3-202ENST00000622383 TRIM35Q9UPQ4 493 aa29.55■■■□□ 2.32
NKX2-3-202ENST00000622383 EDC4Q6P2E9 1401 aaKnown RBP29.55■■■□□ 2.32
NKX2-3-202ENST00000622383 NUDT16Q96DE0 195 aaKnown RBP29.54■■■□□ 2.32
NKX2-3-202ENST00000622383 ERICH6Q7L0X2 663 aa29.53■■■□□ 2.32
NKX2-3-202ENST00000622383 PANK1Q8TE04 598 aa29.53■■■□□ 2.32
NKX2-3-202ENST00000622383 ADAMTS13Q76LX8 1427 aa29.53■■■□□ 2.32
NKX2-3-202ENST00000622383 FBLN1P23142 703 aa29.53■■■□□ 2.32
NKX2-3-202ENST00000622383 CANXP27824 592 aaKnown RBP29.52■■■□□ 2.32
NKX2-3-202ENST00000622383 MAPK8IP3Q9UPT6 1336 aa29.52■■■□□ 2.32
NKX2-3-202ENST00000622383 CDC42BPGQ6DT37 1551 aa29.51■■■□□ 2.31
NKX2-3-202ENST00000622383 IPO9Q96P70 1041 aaKnown RBP29.51■■■□□ 2.31
NKX2-3-202ENST00000622383 FRAT1Q92837 279 aaPredicted RBP29.5■■■□□ 2.31
NKX2-3-202ENST00000622383 NCKAP5LQ9HCH0 1330 aa29.5■■■□□ 2.31
NKX2-3-202ENST00000622383 COG6Q9Y2V7 657 aa29.5■■■□□ 2.31
NKX2-3-202ENST00000622383 CCDC61Q9Y6R9 512 aa29.5■■■□□ 2.31
NKX2-3-202ENST00000622383 ROBO2Q9HCK4 1378 aa29.49■■■□□ 2.31
NKX2-3-202ENST00000622383 LTKP29376 864 aa29.49■■■□□ 2.31
NKX2-3-202ENST00000622383 NOP58Q9Y2X3 529 aaKnown RBP29.48■■■□□ 2.31
NKX2-3-202ENST00000622383 NME9Q86XW9 330 aa29.48■■■□□ 2.31
NKX2-3-202ENST00000622383 PLEKHG1Q9ULL1 1385 aa29.47■■■□□ 2.31
NKX2-3-202ENST00000622383 FCHSD2O94868 740 aa29.46■■■□□ 2.31
NKX2-3-202ENST00000622383 CEBPAP49715 358 aaPredicted RBP29.46■■■□□ 2.31
NKX2-3-202ENST00000622383 TSR2Q969E8 191 aaKnown RBP29.46■■■□□ 2.31
NKX2-3-202ENST00000622383 PNNQ9H307 717 aaKnown RBP29.46■■■□□ 2.31
NKX2-3-202ENST00000622383 CLUAP1Q96AJ1 413 aa29.46■■■□□ 2.31
NKX2-3-202ENST00000622383 BCL2L13Q9BXK5 485 aa29.46■■■□□ 2.31
NKX2-3-202ENST00000622383 IL16Q14005 1332 aa29.45■■■□□ 2.31
NKX2-3-202ENST00000622383 PRR36Q9H6K5 1346 aa29.45■■■□□ 2.31
NKX2-3-202ENST00000622383 PPM1GO15355 546 aaPredicted RBP29.45■■■□□ 2.31
NKX2-3-202ENST00000622383 ZRANB1Q9UGI0 708 aa29.45■■■□□ 2.31
NKX2-3-202ENST00000622383 PAK3O75914 559 aaPredicted RBP29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 IGHDP01880 384 aa29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 RIPK4P57078 832 aa29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 CT47B1P0C2W7 299 aaPredicted RBP29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 RLBP1P12271 317 aa29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 RSPH6AQ9H0K4 717 aa29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 TNNQ9UQP3 1299 aa29.44■■■□□ 2.3
NKX2-3-202ENST00000622383 LRRC7Q96NW7 1537 aa29.43■■■□□ 2.3
NKX2-3-202ENST00000622383 EMILIN1Q9Y6C2 1016 aa29.43■■■□□ 2.3
NKX2-3-202ENST00000622383 AATKQ6ZMQ8 1374 aa29.42■■■□□ 2.3
NKX2-3-202ENST00000622383 MON2Q7Z3U7 1717 aa29.41■■■□□ 2.3
NKX2-3-202ENST00000622383 EXOSC9Q06265 439 aaKnown RBP29.41■■■□□ 2.3
NKX2-3-202ENST00000622383 PRKAR2BP31323 418 aa29.39■■■□□ 2.29
NKX2-3-202ENST00000622383 NPM2Q86SE8 214 aaKnown RBP29.39■■■□□ 2.29
NKX2-3-202ENST00000622383 ZNF692Q9BU19 519 aaPredicted RBP29.38■■■□□ 2.29
NKX2-3-202ENST00000622383 CDK12Q9NYV4 1490 aaPredicted RBP29.38■■■□□ 2.29
NKX2-3-202ENST00000622383 MAP2P11137 1827 aaKnown RBP29.37■■■□□ 2.29
NKX2-3-202ENST00000622383 IL13P35225 146 aa29.37■■■□□ 2.29
NKX2-3-202ENST00000622383 AAMPQ13685 434 aa29.37■■■□□ 2.29
NKX2-3-202ENST00000622383 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.37■■■□□ 2.29
NKX2-3-202ENST00000622383 COG3Q96JB2 828 aa29.37■■■□□ 2.29
NKX2-3-202ENST00000622383 AKAP12Q02952 1782 aa29.36■■■□□ 2.29
NKX2-3-202ENST00000622383 C3P01024 1663 aa29.36■■■□□ 2.29
NKX2-3-202ENST00000622383 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
NKX2-3-202ENST00000622383 ARHGAP23Q9P227 1491 aa29.34■■■□□ 2.29
NKX2-3-202ENST00000622383 PHACTR3Q96KR7 559 aa29.33■■■□□ 2.29
NKX2-3-202ENST00000622383 SLC26A8Q96RN1 970 aa29.33■■■□□ 2.29
NKX2-3-202ENST00000622383 SLIT1O75093 1534 aa29.33■■■□□ 2.29
NKX2-3-202ENST00000622383 HMOX1P09601 288 aa29.33■■■□□ 2.29
NKX2-3-202ENST00000622383 RGS3P49796 1198 aa29.33■■■□□ 2.29
NKX2-3-202ENST00000622383 ZBTB47Q9UFB7 747 aaPredicted RBP29.33■■■□□ 2.29
NKX2-3-202ENST00000622383 ZKSCAN2Q63HK3 967 aa29.32■■■□□ 2.28
NKX2-3-202ENST00000622383 EID1Q9Y6B2 187 aa29.32■■■□□ 2.28
NKX2-3-202ENST00000622383 ITSN1Q15811 1721 aa29.32■■■□□ 2.28
NKX2-3-202ENST00000622383 C8orf34Q49A92 452 aa29.32■■■□□ 2.28
NKX2-3-202ENST00000622383 FAM161AQ3B820 660 aa29.31■■■□□ 2.28
NKX2-3-202ENST00000622383 SSH1Q8WYL5 1049 aa29.31■■■□□ 2.28
NKX2-3-202ENST00000622383 PCDHB15Q9Y5E8 787 aa29.31■■■□□ 2.28
NKX2-3-202ENST00000622383 RRS1Q15050 365 aaKnown RBP29.3■■■□□ 2.28
NKX2-3-202ENST00000622383 SMC4Q9NTJ3 1288 aa29.3■■■□□ 2.28
NKX2-3-202ENST00000622383 NFE2L2Q16236 605 aa29.3■■■□□ 2.28
NKX2-3-202ENST00000622383 PLEKHG3A1L390 1219 aa29.29■■■□□ 2.28
NKX2-3-202ENST00000622383 NEFMP07197 916 aa29.28■■■□□ 2.28
NKX2-3-202ENST00000622383 MVPQ14764 893 aaKnown RBP29.28■■■□□ 2.28
NKX2-3-202ENST00000622383 TOPAZ1Q8N9V7 1692 aa29.28■■■□□ 2.28
NKX2-3-202ENST00000622383 ACEP12821 1306 aa29.28■■■□□ 2.28
NKX2-3-202ENST00000622383 DZIP1LQ8IYY4 767 aaKnown RBP29.28■■■□□ 2.28
NKX2-3-202ENST00000622383 TTC21BQ7Z4L5 1316 aa29.27■■■□□ 2.28
NKX2-3-202ENST00000622383 PMFBP1Q8TBY8 1022 aa29.27■■■□□ 2.28
NKX2-3-202ENST00000622383 NRKQ7Z2Y5 1582 aa29.26■■■□□ 2.27
NKX2-3-202ENST00000622383 TBX22Q9Y458 520 aa29.26■■■□□ 2.27
NKX2-3-202ENST00000622383 AMOTL2Q9Y2J4 779 aa29.25■■■□□ 2.27
NKX2-3-202ENST00000622383 TRIM27P14373 513 aa29.24■■■□□ 2.27
NKX2-3-202ENST00000622383 PLPPR3Q6T4P5 718 aa29.24■■■□□ 2.27
NKX2-3-202ENST00000622383 NUTM2FA1L443 756 aa29.24■■■□□ 2.27
NKX2-3-202ENST00000622383 FTSJ3Q8IY81 847 aaKnown RBP29.23■■■□□ 2.27
NKX2-3-202ENST00000622383 USP6P35125 1406 aa29.22■■■□□ 2.27
NKX2-3-202ENST00000622383 FER1L4A9Z1Z3 1794 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms