RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 TONSLQ96HA7 1378 aa30.18■■■□□ 2.42
PMPCA-212ENST00000622209 A0A0G2JS52 829 aa30.18■■■□□ 2.42
PMPCA-212ENST00000622209 MYT1Q01538 1121 aa30.18■■■□□ 2.42
PMPCA-212ENST00000622209 KIAA1210Q9ULL0 1709 aa30.18■■■□□ 2.42
PMPCA-212ENST00000622209 ARHGEF28Q8N1W1 1705 aaKnown RBP30.17■■■□□ 2.42
PMPCA-212ENST00000622209 ZRANB1Q9UGI0 708 aa30.17■■■□□ 2.42
PMPCA-212ENST00000622209 ABCA3Q99758 1704 aa30.16■■■□□ 2.42
PMPCA-212ENST00000622209 FAM98CQ17RN3 349 aaKnown RBP30.16■■■□□ 2.42
PMPCA-212ENST00000622209 NUTM2GQ5VZR2 741 aa30.16■■■□□ 2.42
PMPCA-212ENST00000622209 KRT27Q7Z3Y8 459 aa30.16■■■□□ 2.42
PMPCA-212ENST00000622209 CCDC61Q9Y6R9 512 aa30.16■■■□□ 2.42
PMPCA-212ENST00000622209 PLCH1Q4KWH8 1693 aa30.15■■■□□ 2.42
PMPCA-212ENST00000622209 NBPF8Q3BBV2 869 aa30.15■■■□□ 2.42
PMPCA-212ENST00000622209 ACEP12821 1306 aa30.15■■■□□ 2.42
PMPCA-212ENST00000622209 PRDM11Q9NQV5 511 aa30.14■■■□□ 2.42
PMPCA-212ENST00000622209 ALS2Q96Q42 1657 aa30.14■■■□□ 2.41
PMPCA-212ENST00000622209 NWD2Q9ULI1 1742 aa30.12■■■□□ 2.41
PMPCA-212ENST00000622209 SRCAPQ6ZRS2 3230 aa30.12■■■□□ 2.41
PMPCA-212ENST00000622209 BLMP54132 1417 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-212ENST00000622209 PLEKHG3A1L390 1219 aa30.11■■■□□ 2.41
PMPCA-212ENST00000622209 SRPK2P78362 688 aaKnown RBP30.1■■■□□ 2.41
PMPCA-212ENST00000622209 SF3B2Q13435 895 aaKnown RBP30.1■■■□□ 2.41
PMPCA-212ENST00000622209 DEFB132Q7Z7B7 95 aa30.1■■■□□ 2.41
PMPCA-212ENST00000622209 ZC3H6P61129 1189 aaKnown RBP30.09■■■□□ 2.41
PMPCA-212ENST00000622209 CHRNA2Q15822 529 aa30.09■■■□□ 2.41
PMPCA-212ENST00000622209 CCER1Q8TC90 406 aaPredicted RBP30.09■■■□□ 2.41
PMPCA-212ENST00000622209 CENPJQ9HC77 1338 aaPredicted RBP30.09■■■□□ 2.41
PMPCA-212ENST00000622209 POLR3AO14802 1390 aaPredicted RBP30.08■■■□□ 2.41
PMPCA-212ENST00000622209 CABP2Q9NPB3 220 aa30.08■■■□□ 2.41
PMPCA-212ENST00000622209 KIAA0232Q92628 1395 aa30.07■■■□□ 2.4
PMPCA-212ENST00000622209 SPATA31A5Q5VU36 1347 aa30.07■■■□□ 2.4
PMPCA-212ENST00000622209 SPATA31A7Q8IWB4 1347 aa30.07■■■□□ 2.4
PMPCA-212ENST00000622209 TIMELESSQ9UNS1 1208 aa30.05■■■□□ 2.4
PMPCA-212ENST00000622209 COL14A1Q05707 1796 aaKnown RBP30.05■■■□□ 2.4
PMPCA-212ENST00000622209 BRWD3Q6RI45 1802 aa30.04■■■□□ 2.4
PMPCA-212ENST00000622209 ABTB2Q8N961 1025 aa30.04■■■□□ 2.4
PMPCA-212ENST00000622209 STRN4Q9NRL3 753 aa30.04■■■□□ 2.4
PMPCA-212ENST00000622209 TRPM1Q7Z4N2 1603 aa30.03■■■□□ 2.4
PMPCA-212ENST00000622209 ITSN1Q15811 1721 aa30.02■■■□□ 2.4
PMPCA-212ENST00000622209 NRAPQ86VF7 1730 aa30.02■■■□□ 2.4
PMPCA-212ENST00000622209 FAM182BQ5T319 152 aa30.01■■■□□ 2.39
PMPCA-212ENST00000622209 PPIP5K1Q6PFW1 1433 aa30■■■□□ 2.39
PMPCA-212ENST00000622209 CABP1Q9NZU7 370 aa29.98■■■□□ 2.39
PMPCA-212ENST00000622209 ROCK2O75116 1388 aaKnown RBP29.98■■■□□ 2.39
PMPCA-212ENST00000622209 EVA1CP58658 441 aa29.97■■■□□ 2.39
PMPCA-212ENST00000622209 SPATA31A1Q5TZJ5 1347 aa29.96■■■□□ 2.39
PMPCA-212ENST00000622209 CRYBG1Q9Y4K1 1723 aa29.96■■■□□ 2.39
PMPCA-212ENST00000622209 TOPAZ1Q8N9V7 1692 aa29.95■■■□□ 2.39
PMPCA-212ENST00000622209 USP35Q9P2H5 1018 aa29.95■■■□□ 2.39
PMPCA-212ENST00000622209 NLRP13Q86W25 1043 aa29.94■■■□□ 2.38
PMPCA-212ENST00000622209 BAG6P46379 1132 aa29.92■■■□□ 2.38
PMPCA-212ENST00000622209 USP19O94966 1318 aa29.92■■■□□ 2.38
PMPCA-212ENST00000622209 GCP02774 474 aa29.91■■■□□ 2.38
PMPCA-212ENST00000622209 EVC2Q86UK5 1308 aa29.9■■■□□ 2.38
PMPCA-212ENST00000622209 PHRF1Q9P1Y6 1649 aaKnown RBP29.89■■■□□ 2.38
PMPCA-212ENST00000622209 LARP1Q6PKG0 1096 aaKnown RBP29.89■■■□□ 2.38
PMPCA-212ENST00000622209 ZBTB7CA1YPR0 619 aa29.88■■■□□ 2.37
PMPCA-212ENST00000622209 NLRP6P59044 892 aa29.87■■■□□ 2.37
PMPCA-212ENST00000622209 EN1Q05925 392 aaPredicted RBP29.87■■■□□ 2.37
PMPCA-212ENST00000622209 CARD11Q9BXL7 1154 aa29.87■■■□□ 2.37
PMPCA-212ENST00000622209 CPDO75976 1380 aa29.86■■■□□ 2.37
PMPCA-212ENST00000622209 SSH2Q76I76 1423 aa29.86■■■□□ 2.37
PMPCA-212ENST00000622209 QRICH2Q9H0J4 1663 aa29.85■■■□□ 2.37
PMPCA-212ENST00000622209 BRD4O60885 1362 aaPredicted RBP29.84■■■□□ 2.37
PMPCA-212ENST00000622209 CAMTA1Q9Y6Y1 1673 aa29.84■■■□□ 2.37
PMPCA-212ENST00000622209 NRKQ7Z2Y5 1582 aa29.83■■■□□ 2.37
PMPCA-212ENST00000622209 USP6P35125 1406 aa29.83■■■□□ 2.37
PMPCA-212ENST00000622209 THSD7AQ9UPZ6 1657 aa29.82■■■□□ 2.36
PMPCA-212ENST00000622209 BARGINQ6ZT62 677 aa29.82■■■□□ 2.36
PMPCA-212ENST00000622209 TCP11L2Q8N4U5 519 aa29.82■■■□□ 2.36
PMPCA-212ENST00000622209 PSDA5PKW4 1024 aaPredicted RBP29.81■■■□□ 2.36
PMPCA-212ENST00000622209 FAM196AQ6ZSG2 479 aa29.81■■■□□ 2.36
PMPCA-212ENST00000622209 TRIM37O94972 964 aa29.8■■■□□ 2.36
PMPCA-212ENST00000622209 PDE3BQ13370 1112 aa29.8■■■□□ 2.36
PMPCA-212ENST00000622209 ZNF692Q9BU19 519 aaPredicted RBP29.76■■■□□ 2.35
PMPCA-212ENST00000622209 EZH2Q15910 746 aaKnown RBP29.75■■■□□ 2.35
PMPCA-212ENST00000622209 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
PMPCA-212ENST00000622209 THRAP3Q9Y2W1 955 aaKnown RBP29.74■■■□□ 2.35
PMPCA-212ENST00000622209 APBA3O96018 575 aa29.73■■■□□ 2.35
PMPCA-212ENST00000622209 LMO7Q8WWI1 1683 aa29.72■■■□□ 2.35
PMPCA-212ENST00000622209 SOX12O15370 315 aa29.72■■■□□ 2.35
PMPCA-212ENST00000622209 COL5A2P05997 1499 aaPredicted RBP29.72■■■□□ 2.35
PMPCA-212ENST00000622209 AATKQ6ZMQ8 1374 aa29.71■■■□□ 2.35
PMPCA-212ENST00000622209 CAMKK2Q96RR4 588 aa29.7■■■□□ 2.35
PMPCA-212ENST00000622209 R3HDM1Q15032 1099 aaKnown RBP29.69■■■□□ 2.34
PMPCA-212ENST00000622209 AXIN2Q9Y2T1 843 aa29.69■■■□□ 2.34
PMPCA-212ENST00000622209 SBNO2Q9Y2G9 1366 aa29.68■■■□□ 2.34
PMPCA-212ENST00000622209 TOM1L2Q6ZVM7 507 aa29.68■■■□□ 2.34
PMPCA-212ENST00000622209 DISP2A7MBM2 1401 aa29.68■■■□□ 2.34
PMPCA-212ENST00000622209 RGPD1P0DJD0 1748 aa29.68■■■□□ 2.34
PMPCA-212ENST00000622209 SLIT3O75094 1523 aa29.67■■■□□ 2.34
PMPCA-212ENST00000622209 CRB1P82279 1406 aa29.67■■■□□ 2.34
PMPCA-212ENST00000622209 KTN1Q86UP2 1357 aaKnown RBP29.66■■■□□ 2.34
PMPCA-212ENST00000622209 ARHGEF25Q86VW2 580 aa29.65■■■□□ 2.34
PMPCA-212ENST00000622209 KCNH5Q8NCM2 988 aa29.65■■■□□ 2.34
PMPCA-212ENST00000622209 TTC21AQ8NDW8 1320 aa29.65■■■□□ 2.34
PMPCA-212ENST00000622209 CPSF1Q10570 1443 aaKnown RBP29.63■■■□□ 2.33
PMPCA-212ENST00000622209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.63■■■□□ 2.33
PMPCA-212ENST00000622209 PIK3C2AO00443 1686 aa29.63■■■□□ 2.33
PMPCA-212ENST00000622209 SLC24A1O60721 1099 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms