RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.52□□□□□ -0.25
TARDBP-227ENST00000622057 ZC3H6P61129 1189 aaKnown RBP13.51□□□□□ -0.25
TARDBP-227ENST00000622057 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
TARDBP-227ENST00000622057 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
TARDBP-227ENST00000622057 NBPF8Q3BBV2 869 aa13.5□□□□□ -0.25
TARDBP-227ENST00000622057 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
TARDBP-227ENST00000622057 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
TARDBP-227ENST00000622057 EP400Q96L91 3159 aa13.49□□□□□ -0.25
TARDBP-227ENST00000622057 ACEP12821 1306 aa13.49□□□□□ -0.25
TARDBP-227ENST00000622057 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
TARDBP-227ENST00000622057 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
TARDBP-227ENST00000622057 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
TARDBP-227ENST00000622057 ABTB2Q8N961 1025 aa13.48□□□□□ -0.25
TARDBP-227ENST00000622057 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
TARDBP-227ENST00000622057 BAG6P46379 1132 aa13.47□□□□□ -0.25
TARDBP-227ENST00000622057 EVA1CP58658 441 aa13.47□□□□□ -0.25
TARDBP-227ENST00000622057 SRPK2P78362 688 aaKnown RBP13.47□□□□□ -0.25
TARDBP-227ENST00000622057 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
TARDBP-227ENST00000622057 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
TARDBP-227ENST00000622057 KIAA0232Q92628 1395 aa13.46□□□□□ -0.25
TARDBP-227ENST00000622057 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.25
TARDBP-227ENST00000622057 PLEKHG3A1L390 1219 aa13.46□□□□□ -0.25
TARDBP-227ENST00000622057 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
TARDBP-227ENST00000622057 USP35Q9P2H5 1018 aa13.46□□□□□ -0.25
TARDBP-227ENST00000622057 ATP7BP35670 1465 aa13.46□□□□□ -0.25
TARDBP-227ENST00000622057 ABCA3Q99758 1704 aa13.45□□□□□ -0.26
TARDBP-227ENST00000622057 SRCAPQ6ZRS2 3230 aa13.45□□□□□ -0.26
TARDBP-227ENST00000622057 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
TARDBP-227ENST00000622057 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-227ENST00000622057 ALS2Q96Q42 1657 aa13.44□□□□□ -0.26
TARDBP-227ENST00000622057 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-227ENST00000622057 POLR3AO14802 1390 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-227ENST00000622057 COL14A1Q05707 1796 aaKnown RBP13.43□□□□□ -0.26
TARDBP-227ENST00000622057 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-227ENST00000622057 ARHGEF28Q8N1W1 1705 aaKnown RBP13.43□□□□□ -0.26
TARDBP-227ENST00000622057 SIN3AQ96ST3 1273 aa13.43□□□□□ -0.26
TARDBP-227ENST00000622057 ZBTB7CA1YPR0 619 aa13.42□□□□□ -0.26
TARDBP-227ENST00000622057 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
TARDBP-227ENST00000622057 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
TARDBP-227ENST00000622057 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
TARDBP-227ENST00000622057 CABP1Q9NZU7 370 aa13.42□□□□□ -0.26
TARDBP-227ENST00000622057 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
TARDBP-227ENST00000622057 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
TARDBP-227ENST00000622057 TRIM37O94972 964 aa13.4□□□□□ -0.26
TARDBP-227ENST00000622057 GCP02774 474 aa13.4□□□□□ -0.26
TARDBP-227ENST00000622057 PDE3BQ13370 1112 aa13.4□□□□□ -0.26
TARDBP-227ENST00000622057 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
TARDBP-227ENST00000622057 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
TARDBP-227ENST00000622057 FAM196AQ6ZSG2 479 aa13.39□□□□□ -0.27
TARDBP-227ENST00000622057 APBA3O96018 575 aa13.38□□□□□ -0.27
TARDBP-227ENST00000622057 NLRP6P59044 892 aa13.38□□□□□ -0.27
TARDBP-227ENST00000622057 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
TARDBP-227ENST00000622057 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
TARDBP-227ENST00000622057 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
TARDBP-227ENST00000622057 USP19O94966 1318 aa13.37□□□□□ -0.27
TARDBP-227ENST00000622057 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
TARDBP-227ENST00000622057 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
TARDBP-227ENST00000622057 SSH2Q76I76 1423 aa13.36□□□□□ -0.27
TARDBP-227ENST00000622057 EVC2Q86UK5 1308 aa13.36□□□□□ -0.27
TARDBP-227ENST00000622057 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
TARDBP-227ENST00000622057 CAMKK2Q96RR4 588 aa13.35□□□□□ -0.27
TARDBP-227ENST00000622057 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
TARDBP-227ENST00000622057 CPDO75976 1380 aa13.34□□□□□ -0.27
TARDBP-227ENST00000622057 THRAP3Q9Y2W1 955 aaKnown RBP13.34□□□□□ -0.27
TARDBP-227ENST00000622057 PHRF1Q9P1Y6 1649 aaKnown RBP13.34□□□□□ -0.27
TARDBP-227ENST00000622057 SOX12O15370 315 aa13.33□□□□□ -0.28
TARDBP-227ENST00000622057 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-227ENST00000622057 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
TARDBP-227ENST00000622057 THSD7AQ9UPZ6 1657 aa13.33□□□□□ -0.28
TARDBP-227ENST00000622057 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-227ENST00000622057 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
TARDBP-227ENST00000622057 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
TARDBP-227ENST00000622057 USP6P35125 1406 aa13.31□□□□□ -0.28
TARDBP-227ENST00000622057 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
TARDBP-227ENST00000622057 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
TARDBP-227ENST00000622057 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
TARDBP-227ENST00000622057 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
TARDBP-227ENST00000622057 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
TARDBP-227ENST00000622057 KCNH5Q8NCM2 988 aa13.29□□□□□ -0.28
TARDBP-227ENST00000622057 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
TARDBP-227ENST00000622057 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
TARDBP-227ENST00000622057 CRB1P82279 1406 aa13.29□□□□□ -0.28
TARDBP-227ENST00000622057 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
TARDBP-227ENST00000622057 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
TARDBP-227ENST00000622057 DDB1Q16531 1140 aa13.28□□□□□ -0.28
TARDBP-227ENST00000622057 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
TARDBP-227ENST00000622057 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.29
TARDBP-227ENST00000622057 CARD11Q9BXL7 1154 aa13.27□□□□□ -0.29
TARDBP-227ENST00000622057 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-227ENST00000622057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
TARDBP-227ENST00000622057 TMC1Q8TDI8 760 aa13.26□□□□□ -0.29
TARDBP-227ENST00000622057 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
TARDBP-227ENST00000622057 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
TARDBP-227ENST00000622057 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
TARDBP-227ENST00000622057 WDR17Q8IZU2 1322 aa13.25□□□□□ -0.29
TARDBP-227ENST00000622057 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
TARDBP-227ENST00000622057 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
TARDBP-227ENST00000622057 TRPM1Q7Z4N2 1603 aa13.24□□□□□ -0.29
TARDBP-227ENST00000622057 SLIT3O75094 1523 aa13.23□□□□□ -0.29
TARDBP-227ENST00000622057 EXOC5O00471 708 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms